RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 NTPCRQ9BSD7 190 aaKnown RBP16.09■□□□□ 0.17
TNF-208ENST00000449264 SENP6Q9GZR1 1112 aaPredicted RBP16.09■□□□□ 0.17
TNF-208ENST00000449264 IKZF4Q9H2S9 585 aa16.09■□□□□ 0.17
TNF-208ENST00000449264 SEMA6BQ9H3T3 888 aa16.09■□□□□ 0.17
TNF-208ENST00000449264 ST6GALNAC4Q9H4F1 302 aa16.09■□□□□ 0.17
TNF-208ENST00000449264 RWDD2AQ9UIY3 292 aa16.09■□□□□ 0.17
TNF-208ENST00000449264 PHLPP2Q6ZVD8 1323 aa16.09■□□□□ 0.17
TNF-208ENST00000449264 A0A087WZ62 844 aa16.08■□□□□ 0.17
TNF-208ENST00000449264 ARVCFO00192 962 aa16.08■□□□□ 0.17
TNF-208ENST00000449264 PHKA2P46019 1235 aa16.08■□□□□ 0.17
TNF-208ENST00000449264 PTPN11Q06124 597 aaPredicted RBP16.08■□□□□ 0.17
TNF-208ENST00000449264 GSE1Q14687 1217 aa16.08■□□□□ 0.17
TNF-208ENST00000449264 IQCB1Q15051 598 aa16.08■□□□□ 0.17
TNF-208ENST00000449264 TPD52L1Q16890 204 aaPredicted RBP16.08■□□□□ 0.17
TNF-208ENST00000449264 KNOP1Q1ED39 458 aaKnown RBP16.08■□□□□ 0.17
TNF-208ENST00000449264 CT47A1Q5JQC4 288 aaPredicted RBP16.08■□□□□ 0.17
TNF-208ENST00000449264 CDCA2Q69YH5 1023 aaPredicted RBP16.08■□□□□ 0.17
TNF-208ENST00000449264 SERINC5Q86VE9 423 aa16.08■□□□□ 0.17
TNF-208ENST00000449264 BICD1Q96G01 975 aa16.08■□□□□ 0.17
TNF-208ENST00000449264 ACCSQ96QU6 501 aa16.08■□□□□ 0.17
TNF-208ENST00000449264 MED15Q96RN5 788 aa16.08■□□□□ 0.17
TNF-208ENST00000449264 TSG101Q99816 390 aa16.08■□□□□ 0.17
TNF-208ENST00000449264 FDXACB1Q9BRP7 624 aaPredicted RBP16.08■□□□□ 0.17
TNF-208ENST00000449264 STRA6Q9BX79 667 aa16.08■□□□□ 0.17
TNF-208ENST00000449264 C2orf40Q9H1Z8 148 aa16.08■□□□□ 0.17
TNF-208ENST00000449264 TBX20Q9UMR3 447 aa16.08■□□□□ 0.17
TNF-208ENST00000449264 BICDL2A1A5D9 508 aa16.08■□□□□ 0.16
TNF-208ENST00000449264 GOLGA6L3A6NEY3 463 aa16.08■□□□□ 0.16
TNF-208ENST00000449264 GOLGA6L19H0YKK7 550 aa16.08■□□□□ 0.16
TNF-208ENST00000449264 INO80B-WBP1J3KQ70 363 aa16.08■□□□□ 0.16
TNF-208ENST00000449264 MNX1P50219 401 aaPredicted RBP16.08■□□□□ 0.16
TNF-208ENST00000449264 ATN1P54259 1190 aaPredicted RBP16.08■□□□□ 0.16
TNF-208ENST00000449264 STRN3Q13033 797 aa16.08■□□□□ 0.16
TNF-208ENST00000449264 ANKRD40Q6AI12 368 aa16.08■□□□□ 0.16
TNF-208ENST00000449264 TAS1R3Q7RTX0 852 aa16.08■□□□□ 0.16
TNF-208ENST00000449264 WNT8BQ93098 351 aa16.08■□□□□ 0.16
TNF-208ENST00000449264 HVCN1Q96D96 273 aa16.08■□□□□ 0.16
TNF-208ENST00000449264 CTAGE1Q96RT6 745 aa16.08■□□□□ 0.16
TNF-208ENST00000449264 INO80BQ9C086 356 aaPredicted RBP16.08■□□□□ 0.16
TNF-208ENST00000449264 TRPV6Q9H1D0 765 aa16.08■□□□□ 0.16
TNF-208ENST00000449264 KCTD10Q9H3F6 313 aa16.08■□□□□ 0.16
TNF-208ENST00000449264 NFE2L3Q9Y4A8 694 aa16.08■□□□□ 0.16
TNF-208ENST00000449264 K7ERI5 159 aa16.07■□□□□ 0.16
TNF-208ENST00000449264 B4GALT4O60513 344 aa16.07■□□□□ 0.16
TNF-208ENST00000449264 CTSHP09668 335 aa16.07■□□□□ 0.16
TNF-208ENST00000449264 PTENP60484 403 aa16.07■□□□□ 0.16
TNF-208ENST00000449264 HSP90AA4PQ58FG1 418 aa16.07■□□□□ 0.16
TNF-208ENST00000449264 CENPPQ6IPU0 288 aa16.07■□□□□ 0.16
TNF-208ENST00000449264 RSPH3Q86UC2 560 aa16.07■□□□□ 0.16
TNF-208ENST00000449264 MAP4K3Q8IVH8 894 aa16.07■□□□□ 0.16
TNF-208ENST00000449264 SLC43A3Q8NBI5 491 aa16.07■□□□□ 0.16
TNF-208ENST00000449264 ENOX1Q8TC92 643 aaKnown RBP16.07■□□□□ 0.16
TNF-208ENST00000449264 OSMRQ99650 979 aa16.07■□□□□ 0.16
TNF-208ENST00000449264 TMEM206Q9H813 350 aa16.07■□□□□ 0.16
TNF-208ENST00000449264 IFT122Q9HBG6 1241 aa16.07■□□□□ 0.16
TNF-208ENST00000449264 TYW1Q9NV66 732 aaKnown RBP16.07■□□□□ 0.16
TNF-208ENST00000449264 SMTNL1A8MU46 457 aa16.06■□□□□ 0.16
TNF-208ENST00000449264 IKBKBO14920 756 aa16.06■□□□□ 0.16
TNF-208ENST00000449264 HNRNPDLO14979 420 aaKnown RBP16.06■□□□□ 0.16
TNF-208ENST00000449264 CSDE1O75534 798 aaKnown RBP16.06■□□□□ 0.16
TNF-208ENST00000449264 PRKCBP05771 671 aa16.06■□□□□ 0.16
TNF-208ENST00000449264 ABCD1P33897 745 aa16.06■□□□□ 0.16
TNF-208ENST00000449264 EFNA5P52803 228 aa16.06■□□□□ 0.16
TNF-208ENST00000449264 LRRC63Q05C16 580 aa16.06■□□□□ 0.16
TNF-208ENST00000449264 TTI2Q6NXR4 508 aa16.06■□□□□ 0.16
TNF-208ENST00000449264 HS2ST1Q7LGA3 356 aa16.06■□□□□ 0.16
TNF-208ENST00000449264 ZNF410Q86VK4 478 aa16.06■□□□□ 0.16
TNF-208ENST00000449264 EEF2KMTQ96G04 330 aa16.06■□□□□ 0.16
TNF-208ENST00000449264 GBP3Q9H0R5 595 aa16.06■□□□□ 0.16
TNF-208ENST00000449264 MINDY3Q9H8M7 445 aa16.06■□□□□ 0.16
TNF-208ENST00000449264 EXOC7Q9UPT5 735 aa16.06■□□□□ 0.16
TNF-208ENST00000449264 USP20Q9Y2K6 914 aa16.06■□□□□ 0.16
TNF-208ENST00000449264 TISP43B9A030 160 aa16.05■□□□□ 0.16
TNF-208ENST00000449264 M0QZ92 97 aa16.05■□□□□ 0.16
TNF-208ENST00000449264 CLIC2O15247 247 aa16.05■□□□□ 0.16
TNF-208ENST00000449264 CALUO43852 315 aaPredicted RBP16.05■□□□□ 0.16
TNF-208ENST00000449264 PQBP1O60828 265 aaKnown RBP16.05■□□□□ 0.16
TNF-208ENST00000449264 GPR32O75388 356 aa16.05■□□□□ 0.16
TNF-208ENST00000449264 THPOP40225 353 aa16.05■□□□□ 0.16
TNF-208ENST00000449264 MBTD1Q05BQ5 628 aa16.05■□□□□ 0.16
TNF-208ENST00000449264 NCAPHQ15003 741 aa16.05■□□□□ 0.16
TNF-208ENST00000449264 MAPK6Q16659 721 aa16.05■□□□□ 0.16
TNF-208ENST00000449264 ZCWPW2Q504Y3 356 aa16.05■□□□□ 0.16
TNF-208ENST00000449264 SPATA1Q5VX52 437 aa16.05■□□□□ 0.16
TNF-208ENST00000449264 CSGALNACT2Q8N6G5 542 aa16.05■□□□□ 0.16
TNF-208ENST00000449264 ANKLE1Q8NAG6 615 aa16.05■□□□□ 0.16
TNF-208ENST00000449264 CCDC113Q9H0I3 377 aa16.05■□□□□ 0.16
TNF-208ENST00000449264 ADAMTS10Q9H324 1103 aa16.05■□□□□ 0.16
TNF-208ENST00000449264 TMEM134Q9H6X4 195 aa16.05■□□□□ 0.16
TNF-208ENST00000449264 PDXKO00764 312 aa16.05■□□□□ 0.16
TNF-208ENST00000449264 TGFB1I1O43294 461 aa16.05■□□□□ 0.16
TNF-208ENST00000449264 EDN1P05305 212 aa16.05■□□□□ 0.16
TNF-208ENST00000449264 SCP2P22307 547 aa16.05■□□□□ 0.16
TNF-208ENST00000449264 LIG4P49917 911 aa16.05■□□□□ 0.16
TNF-208ENST00000449264 TPM4P67936 248 aa16.05■□□□□ 0.16
TNF-208ENST00000449264 MRPS6P82932 125 aaKnown RBP16.05■□□□□ 0.16
TNF-208ENST00000449264 CDC42EP1Q00587 391 aa16.05■□□□□ 0.16
TNF-208ENST00000449264 PTK7Q13308 1070 aa16.05■□□□□ 0.16
TNF-208ENST00000449264 TMEM132AQ24JP5 1023 aa16.05■□□□□ 0.16
TNF-208ENST00000449264 NME8Q8N427 588 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms