RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 RPA1P27694 616 aa16.21■□□□□ 0.19
USP39-206ENST00000448971 GTF2F1P35269 517 aaKnown RBP eCLIP16.21■□□□□ 0.19
USP39-206ENST00000448971 RARRES1P49788 294 aa16.21■□□□□ 0.19
USP39-206ENST00000448971 NHLH1Q02575 133 aa16.21■□□□□ 0.19
USP39-206ENST00000448971 ADAM15Q13444 863 aa16.21■□□□□ 0.19
USP39-206ENST00000448971 KRT79Q5XKE5 535 aa16.21■□□□□ 0.19
USP39-206ENST00000448971 HFE2Q6ZVN8 426 aa16.21■□□□□ 0.19
USP39-206ENST00000448971 RTN4RL1Q86UN2 441 aaPredicted RBP16.21■□□□□ 0.19
USP39-206ENST00000448971 FAM228AQ86W67 206 aa16.21■□□□□ 0.19
USP39-206ENST00000448971 TCP11Q8WWU5 503 aa16.21■□□□□ 0.19
USP39-206ENST00000448971 PSPC1Q8WXF1 523 aaKnown RBP16.21■□□□□ 0.19
USP39-206ENST00000448971 LINC01599Q8WXQ3 324 aa16.21■□□□□ 0.19
USP39-206ENST00000448971 TMEM143Q96AN5 459 aa16.21■□□□□ 0.19
USP39-206ENST00000448971 ERVK-5Q9HDB9 667 aa16.21■□□□□ 0.19
USP39-206ENST00000448971 ST3GAL5Q9UNP4 418 aa16.21■□□□□ 0.19
USP39-206ENST00000448971 COL4A3BPQ9Y5P4 624 aa16.21■□□□□ 0.19
USP39-206ENST00000448971 STK24Q9Y6E0 443 aa16.21■□□□□ 0.19
USP39-206ENST00000448971 ZDBF2Q9HCK1 2354 aa16.21■□□□□ 0.19
USP39-206ENST00000448971 EVPLQ92817 2033 aa16.2■□□□□ 0.18
USP39-206ENST00000448971 VWA3AA6NCI4 1184 aa16.2■□□□□ 0.18
USP39-206ENST00000448971 PP2D1A8MPX8 630 aa16.2■□□□□ 0.18
USP39-206ENST00000448971 EIF4BP23588 611 aaKnown RBP16.2■□□□□ 0.18
USP39-206ENST00000448971 MRE11P49959 708 aa16.2■□□□□ 0.18
USP39-206ENST00000448971 CDC42EP1Q00587 391 aa16.2■□□□□ 0.18
USP39-206ENST00000448971 RESTQ13127 1097 aa16.2■□□□□ 0.18
USP39-206ENST00000448971 CLUL1Q15846 466 aa16.2■□□□□ 0.18
USP39-206ENST00000448971 HERC4Q5GLZ8 1057 aaPredicted RBP16.2■□□□□ 0.18
USP39-206ENST00000448971 ZNF410Q86VK4 478 aa16.2■□□□□ 0.18
USP39-206ENST00000448971 IGSF22Q8N9C0 903 aa16.2■□□□□ 0.18
USP39-206ENST00000448971 SPRYD3Q8NCJ5 442 aa16.2■□□□□ 0.18
USP39-206ENST00000448971 NACC1Q96RE7 527 aa16.2■□□□□ 0.18
USP39-206ENST00000448971 PLVAPQ9BX97 442 aa16.2■□□□□ 0.18
USP39-206ENST00000448971 GCOM2Q9BZD3 368 aaPredicted RBP16.2■□□□□ 0.18
USP39-206ENST00000448971 ADAMTS10Q9H324 1103 aa16.2■□□□□ 0.18
USP39-206ENST00000448971 ALG13Q9NP73 1137 aaKnown RBP16.2■□□□□ 0.18
USP39-206ENST00000448971 PLAGL2Q9UPG8 496 aa16.2■□□□□ 0.18
USP39-206ENST00000448971 MTMR6Q9Y217 621 aa16.2■□□□□ 0.18
USP39-206ENST00000448971 A0A087WWV3 80 aa16.19■□□□□ 0.18
USP39-206ENST00000448971 A0A087WZ62 844 aa16.19■□□□□ 0.18
USP39-206ENST00000448971 ARHGEF35A5YM69 484 aa16.19■□□□□ 0.18
USP39-206ENST00000448971 LINC01565O15544 149 aa16.19■□□□□ 0.18
USP39-206ENST00000448971 TBX10O75333 385 aa16.19■□□□□ 0.18
USP39-206ENST00000448971 DARSP14868 501 aaKnown RBP16.19■□□□□ 0.18
USP39-206ENST00000448971 MUTP22033 750 aa16.19■□□□□ 0.18
USP39-206ENST00000448971 SFPQP23246 707 aaKnown RBP eCLIP16.19■□□□□ 0.18
USP39-206ENST00000448971 DNAJB1P25685 340 aa16.19■□□□□ 0.18
USP39-206ENST00000448971 PLCB2Q00722 1185 aa16.19■□□□□ 0.18
USP39-206ENST00000448971 BTG3Q14201 252 aaPredicted RBP16.19■□□□□ 0.18
USP39-206ENST00000448971 PDIA5Q14554 519 aa16.19■□□□□ 0.18
USP39-206ENST00000448971 GSE1Q14687 1217 aa16.19■□□□□ 0.18
USP39-206ENST00000448971 SF3A1Q15459 793 aaKnown RBP16.19■□□□□ 0.18
USP39-206ENST00000448971 ZRSR1Q15695 479 aaKnown RBP16.19■□□□□ 0.18
USP39-206ENST00000448971 KSR1Q8IVT5 923 aa16.19■□□□□ 0.18
USP39-206ENST00000448971 P2RX5Q93086 422 aa16.19■□□□□ 0.18
USP39-206ENST00000448971 FDXACB1Q9BRP7 624 aaPredicted RBP16.19■□□□□ 0.18
USP39-206ENST00000448971 TMX1Q9H3N1 280 aa16.19■□□□□ 0.18
USP39-206ENST00000448971 IGFLR1Q9H665 355 aa16.19■□□□□ 0.18
USP39-206ENST00000448971 XPNPEP1Q9NQW7 623 aa16.19■□□□□ 0.18
USP39-206ENST00000448971 LOXHD1Q8IVV2 1947 aa16.18■□□□□ 0.18
USP39-206ENST00000448971 FGFR4P22455 802 aa16.18■□□□□ 0.18
USP39-206ENST00000448971 SMAD4Q13485 552 aaKnown RBP16.18■□□□□ 0.18
USP39-206ENST00000448971 ARL6IP4Q66PJ3 421 aaKnown RBP16.18■□□□□ 0.18
USP39-206ENST00000448971 RNF135Q8IUD6 432 aa16.18■□□□□ 0.18
USP39-206ENST00000448971 SPPL3Q8TCT6 385 aa16.18■□□□□ 0.18
USP39-206ENST00000448971 CDK5RAP3Q96JB5 506 aa16.18■□□□□ 0.18
USP39-206ENST00000448971 MSLNLQ96KJ4 702 aa16.18■□□□□ 0.18
USP39-206ENST00000448971 ADAM2Q99965 735 aa16.18■□□□□ 0.18
USP39-206ENST00000448971 INO80BQ9C086 356 aaPredicted RBP16.18■□□□□ 0.18
USP39-206ENST00000448971 C1orf112Q9NSG2 853 aa16.18■□□□□ 0.18
USP39-206ENST00000448971 DDX19AQ9NUU7 478 aaKnown RBP16.18■□□□□ 0.18
USP39-206ENST00000448971 MUTYHQ9UIF7 546 aa16.18■□□□□ 0.18
USP39-206ENST00000448971 DBR1Q9UK59 544 aaKnown RBP16.18■□□□□ 0.18
USP39-206ENST00000448971 LRFN2Q9ULH4 789 aa16.18■□□□□ 0.18
USP39-206ENST00000448971 KIAA1024Q9UPX6 916 aa16.18■□□□□ 0.18
USP39-206ENST00000448971 CACNA1HO95180 2353 aa16.18■□□□□ 0.18
USP39-206ENST00000448971 MGEA5O60502 916 aa16.17■□□□□ 0.18
USP39-206ENST00000448971 CSDE1O75534 798 aaKnown RBP16.17■□□□□ 0.18
USP39-206ENST00000448971 EYA4O95677 639 aa16.17■□□□□ 0.18
USP39-206ENST00000448971 ITGB1P05556 798 aa16.17■□□□□ 0.18
USP39-206ENST00000448971 STAG3L1P0CL83 205 aa16.17■□□□□ 0.18
USP39-206ENST00000448971 XRCC6P12956 609 aaKnown RBP eCLIP16.17■□□□□ 0.18
USP39-206ENST00000448971 ZSCAN20P17040 1043 aaPredicted RBP16.17■□□□□ 0.18
USP39-206ENST00000448971 CDC25AP30304 524 aa16.17■□□□□ 0.18
USP39-206ENST00000448971 LAMTOR4Q0VGL1 99 aa16.17■□□□□ 0.18
USP39-206ENST00000448971 TFDP1Q14186 410 aa16.17■□□□□ 0.18
USP39-206ENST00000448971 IL17AQ16552 155 aa16.17■□□□□ 0.18
USP39-206ENST00000448971 FAM173BQ6P4H8 233 aa16.17■□□□□ 0.18
USP39-206ENST00000448971 MAEAQ7L5Y9 396 aa16.17■□□□□ 0.18
USP39-206ENST00000448971 NPAS4Q8IUM7 802 aa16.17■□□□□ 0.18
USP39-206ENST00000448971 RNF149Q8NC42 400 aa16.17■□□□□ 0.18
USP39-206ENST00000448971 RASSF8Q8NHQ8 419 aa16.17■□□□□ 0.18
USP39-206ENST00000448971 PRPF31Q8WWY3 499 aaKnown RBP16.17■□□□□ 0.18
USP39-206ENST00000448971 POP1Q99575 1024 aaKnown RBP16.17■□□□□ 0.18
USP39-206ENST00000448971 POLR3FQ9H1D9 316 aaPredicted RBP16.17■□□□□ 0.18
USP39-206ENST00000448971 BHMT2Q9H2M3 363 aa16.17■□□□□ 0.18
USP39-206ENST00000448971 ZSCAN16Q9H4T2 348 aaPredicted RBP16.17■□□□□ 0.18
USP39-206ENST00000448971 CLEC1BQ9P126 229 aa16.17■□□□□ 0.18
USP39-206ENST00000448971 CD207Q9UJ71 328 aa16.17■□□□□ 0.18
USP39-206ENST00000448971 MRPL42Q9Y6G3 142 aaKnown RBP16.17■□□□□ 0.18
USP39-206ENST00000448971 USP34Q70CQ2 3546 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms