RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 MEIS1O00470 390 aa6.1□□□□□ -1.43
CDC42BPA-209ENST00000448940 SLC4A1P02730 911 aa6.1□□□□□ -1.43
CDC42BPA-209ENST00000448940 CYP2C18P33260 490 aa6.1□□□□□ -1.43
CDC42BPA-209ENST00000448940 DGKEP52429 567 aa6.1□□□□□ -1.43
CDC42BPA-209ENST00000448940 KIF11P52732 1056 aa6.1□□□□□ -1.43
CDC42BPA-209ENST00000448940 PWP2Q15269 919 aaKnown RBP6.1□□□□□ -1.43
CDC42BPA-209ENST00000448940 MTFR1Q15390 333 aa6.1□□□□□ -1.43
CDC42BPA-209ENST00000448940 ATL3Q6DD88 541 aa6.1□□□□□ -1.43
CDC42BPA-209ENST00000448940 ERLEC1Q96DZ1 483 aa6.1□□□□□ -1.43
CDC42BPA-209ENST00000448940 PARVGQ9HBI0 331 aa6.1□□□□□ -1.43
CDC42BPA-209ENST00000448940 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.1□□□□□ -1.43
CDC42BPA-209ENST00000448940 CA14Q9ULX7 337 aa6.1□□□□□ -1.43
CDC42BPA-209ENST00000448940 BIN1O00499 593 aa6.1□□□□□ -1.43
CDC42BPA-209ENST00000448940 STK10O94804 968 aaKnown RBP6.1□□□□□ -1.43
CDC42BPA-209ENST00000448940 XRCC5P13010 732 aaKnown RBP6.1□□□□□ -1.43
CDC42BPA-209ENST00000448940 ACTR2P61160 394 aa6.1□□□□□ -1.43
CDC42BPA-209ENST00000448940 GRIK4Q16099 956 aa6.1□□□□□ -1.43
CDC42BPA-209ENST00000448940 BHMTQ93088 406 aa6.1□□□□□ -1.43
CDC42BPA-209ENST00000448940 NXF1Q9UBU9 619 aaKnown RBP6.1□□□□□ -1.43
CDC42BPA-209ENST00000448940 SALL3Q9BXA9 1300 aa6.1□□□□□ -1.43
CDC42BPA-209ENST00000448940 KNTC1P50748 2209 aa6.1□□□□□ -1.43
CDC42BPA-209ENST00000448940 ZNF197O14709 1029 aa6.1□□□□□ -1.43
CDC42BPA-209ENST00000448940 DDHD2O94830 711 aa6.1□□□□□ -1.43
CDC42BPA-209ENST00000448940 PFKPQ01813 784 aa6.1□□□□□ -1.43
CDC42BPA-209ENST00000448940 SIX6OS1Q8N1H7 587 aa6.1□□□□□ -1.43
CDC42BPA-209ENST00000448940 USP38Q8NB14 1042 aa6.1□□□□□ -1.43
CDC42BPA-209ENST00000448940 SMG7Q92540 1137 aaKnown RBP6.1□□□□□ -1.43
CDC42BPA-209ENST00000448940 MAML3Q96JK9 1138 aa6.1□□□□□ -1.43
CDC42BPA-209ENST00000448940 AK8Q96MA6 479 aa6.1□□□□□ -1.43
CDC42BPA-209ENST00000448940 ATXN3LQ9H3M9 355 aa6.1□□□□□ -1.43
CDC42BPA-209ENST00000448940 CUEDC2Q9H467 287 aa6.1□□□□□ -1.43
CDC42BPA-209ENST00000448940 OSBPL3Q9H4L5 887 aa6.1□□□□□ -1.43
CDC42BPA-209ENST00000448940 JMJD4Q9H9V9 463 aa6.1□□□□□ -1.43
CDC42BPA-209ENST00000448940 DDX19AQ9NUU7 478 aaKnown RBP6.1□□□□□ -1.43
CDC42BPA-209ENST00000448940 PLA2G4CQ9UP65 541 aa6.1□□□□□ -1.43
CDC42BPA-209ENST00000448940 NEDD4P46934 1319 aa6.1□□□□□ -1.43
CDC42BPA-209ENST00000448940 ASXL3Q9C0F0 2248 aa6.1□□□□□ -1.43
CDC42BPA-209ENST00000448940 ZNF609O15014 1411 aa6.1□□□□□ -1.43
CDC42BPA-209ENST00000448940 PRKCBP05771 671 aa6.1□□□□□ -1.43
CDC42BPA-209ENST00000448940 PRKCEQ02156 737 aa6.1□□□□□ -1.43
CDC42BPA-209ENST00000448940 CACNB2Q08289 660 aaPredicted RBP6.1□□□□□ -1.43
CDC42BPA-209ENST00000448940 PFKFB3Q16875 520 aaPredicted RBP6.1□□□□□ -1.43
CDC42BPA-209ENST00000448940 NFRKBQ6P4R8 1299 aa6.1□□□□□ -1.43
CDC42BPA-209ENST00000448940 DNAJB3Q8WWF6 145 aa6.1□□□□□ -1.43
CDC42BPA-209ENST00000448940 RIT2Q99578 217 aa6.1□□□□□ -1.43
CDC42BPA-209ENST00000448940 PLVAPQ9BX97 442 aa6.1□□□□□ -1.43
CDC42BPA-209ENST00000448940 H3BQ06 376 aaPredicted RBP6.1□□□□□ -1.43
CDC42BPA-209ENST00000448940 DNM1LO00429 736 aa6.1□□□□□ -1.43
CDC42BPA-209ENST00000448940 CTSEP14091 401 aa6.1□□□□□ -1.43
CDC42BPA-209ENST00000448940 PUS10Q3MIT2 529 aaKnown RBP6.1□□□□□ -1.43
CDC42BPA-209ENST00000448940 FAM26FQ5R3K3 315 aa6.1□□□□□ -1.43
CDC42BPA-209ENST00000448940 ZNF746Q6NUN9 644 aaPredicted RBP6.1□□□□□ -1.43
CDC42BPA-209ENST00000448940 LRRC8DQ7L1W4 858 aa6.1□□□□□ -1.43
CDC42BPA-209ENST00000448940 APBB2Q92870 758 aa6.1□□□□□ -1.43
CDC42BPA-209ENST00000448940 LXNQ9BS40 222 aa6.1□□□□□ -1.43
CDC42BPA-209ENST00000448940 ARVCFO00192 962 aa6.09□□□□□ -1.43
CDC42BPA-209ENST00000448940 CREMQ03060 361 aa6.09□□□□□ -1.43
CDC42BPA-209ENST00000448940 MUM1L1Q5H9M0 696 aa6.09□□□□□ -1.43
CDC42BPA-209ENST00000448940 PTCRAQ6ISU1 281 aaPredicted RBP6.09□□□□□ -1.43
CDC42BPA-209ENST00000448940 SCG3Q8WXD2 468 aaKnown RBP6.09□□□□□ -1.43
CDC42BPA-209ENST00000448940 GMLQ99445 158 aa6.09□□□□□ -1.43
CDC42BPA-209ENST00000448940 NRCAMQ92823 1304 aa6.09□□□□□ -1.43
CDC42BPA-209ENST00000448940 MAP2P11137 1827 aaKnown RBP6.09□□□□□ -1.43
CDC42BPA-209ENST00000448940 IKBKBO14920 756 aa6.09□□□□□ -1.43
CDC42BPA-209ENST00000448940 INSRRP14616 1297 aa6.09□□□□□ -1.43
CDC42BPA-209ENST00000448940 CCDC14Q49A88 953 aa6.09□□□□□ -1.43
CDC42BPA-209ENST00000448940 CST9Q5W186 159 aa6.09□□□□□ -1.43
CDC42BPA-209ENST00000448940 LRRC71Q8N4P6 559 aa6.09□□□□□ -1.43
CDC42BPA-209ENST00000448940 SAMD11Q96NU1 681 aa6.09□□□□□ -1.43
CDC42BPA-209ENST00000448940 BARHL2Q9NY43 387 aa6.09□□□□□ -1.43
CDC42BPA-209ENST00000448940 TPRP12270 2363 aaKnown RBP6.09□□□□□ -1.43
CDC42BPA-209ENST00000448940 LAG3P18627 525 aa6.09□□□□□ -1.43
CDC42BPA-209ENST00000448940 GRIK5Q16478 980 aa6.09□□□□□ -1.43
CDC42BPA-209ENST00000448940 LY6KQ17RY6 165 aa6.09□□□□□ -1.43
CDC42BPA-209ENST00000448940 C2orf27AQ580R0 203 aa6.09□□□□□ -1.43
CDC42BPA-209ENST00000448940 TRMT2AQ8IZ69 625 aaKnown RBP6.09□□□□□ -1.43
CDC42BPA-209ENST00000448940 FAM177A1Q8N128 213 aaPredicted RBP6.09□□□□□ -1.43
CDC42BPA-209ENST00000448940 STAG2Q8N3U4 1231 aa6.09□□□□□ -1.43
CDC42BPA-209ENST00000448940 ZNF830Q96NB3 372 aaPredicted RBP6.09□□□□□ -1.43
CDC42BPA-209ENST00000448940 CIPCQ9C0C6 399 aa6.09□□□□□ -1.43
CDC42BPA-209ENST00000448940 KCNH7Q9NS40 1196 aa6.09□□□□□ -1.43
CDC42BPA-209ENST00000448940 PAXBP1Q9Y5B6 917 aa6.09□□□□□ -1.43
CDC42BPA-209ENST00000448940 NHSL1Q5SYE7 1610 aa6.09□□□□□ -1.43
CDC42BPA-209ENST00000448940 NRXN3Q9Y4C0 1643 aa6.09□□□□□ -1.43
CDC42BPA-209ENST00000448940 PFKFB2O60825 505 aa6.09□□□□□ -1.43
CDC42BPA-209ENST00000448940 N4BP1O75113 896 aaKnown RBP6.09□□□□□ -1.43
CDC42BPA-209ENST00000448940 B3GAT3O94766 335 aa6.09□□□□□ -1.43
CDC42BPA-209ENST00000448940 MMP3P08254 477 aa6.09□□□□□ -1.43
CDC42BPA-209ENST00000448940 SMARCA1P28370 1054 aa6.09□□□□□ -1.43
CDC42BPA-209ENST00000448940 MAGEA10P43363 369 aaPredicted RBP6.09□□□□□ -1.43
CDC42BPA-209ENST00000448940 TJAP1Q5JTD0 557 aa6.09□□□□□ -1.43
CDC42BPA-209ENST00000448940 ADAM2Q99965 735 aa6.09□□□□□ -1.43
CDC42BPA-209ENST00000448940 PXMP2Q9NR77 195 aa6.09□□□□□ -1.43
CDC42BPA-209ENST00000448940 NRLP54845 237 aa6.09□□□□□ -1.43
CDC42BPA-209ENST00000448940 BCAR1P56945 870 aa6.09□□□□□ -1.43
CDC42BPA-209ENST00000448940 ZNF667Q5HYK9 610 aa6.09□□□□□ -1.43
CDC42BPA-209ENST00000448940 AFAP1L1Q8TED9 768 aa6.09□□□□□ -1.43
CDC42BPA-209ENST00000448940 NKD2Q969F2 451 aaPredicted RBP6.09□□□□□ -1.43
CDC42BPA-209ENST00000448940 TCF25Q9BQ70 676 aa6.09□□□□□ -1.43
CDC42BPA-209ENST00000448940 USP25Q9UHP3 1055 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms