RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 KRT32Q14532 448 aa20.27■□□□□ 0.84
CHCHD3-203ENST00000448878 GPR149Q86SP6 731 aa20.27■□□□□ 0.84
CHCHD3-203ENST00000448878 RASEFQ8IZ41 740 aa20.27■□□□□ 0.84
CHCHD3-203ENST00000448878 SIX5Q8N196 739 aa20.27■□□□□ 0.84
CHCHD3-203ENST00000448878 URGCPQ8TCY9 931 aa20.27■□□□□ 0.84
CHCHD3-203ENST00000448878 KCNG4Q8TDN1 519 aa20.27■□□□□ 0.84
CHCHD3-203ENST00000448878 BCL7CQ8WUZ0 217 aaPredicted RBP20.27■□□□□ 0.84
CHCHD3-203ENST00000448878 PHKBQ93100 1093 aa20.27■□□□□ 0.84
CHCHD3-203ENST00000448878 LENG9Q96B70 501 aa20.27■□□□□ 0.84
CHCHD3-203ENST00000448878 NLRP4Q96MN2 994 aa20.27■□□□□ 0.84
CHCHD3-203ENST00000448878 FAM193BQ96PV7 902 aaPredicted RBP20.27■□□□□ 0.84
CHCHD3-203ENST00000448878 SUCLA2Q9P2R7 463 aaPredicted RBP20.27■□□□□ 0.84
CHCHD3-203ENST00000448878 DDX11L8A8MPP1 907 aa20.26■□□□□ 0.83
CHCHD3-203ENST00000448878 PRPF3O43395 683 aaKnown RBP20.26■□□□□ 0.83
CHCHD3-203ENST00000448878 OFD1O75665 1012 aa20.26■□□□□ 0.83
CHCHD3-203ENST00000448878 CPA1P15085 419 aa20.26■□□□□ 0.83
CHCHD3-203ENST00000448878 CWF19L1Q69YN2 538 aaKnown RBP20.26■□□□□ 0.83
CHCHD3-203ENST00000448878 RSPH1Q8WYR4 309 aa20.26■□□□□ 0.83
CHCHD3-203ENST00000448878 PGBD4Q96DM1 585 aa20.26■□□□□ 0.83
CHCHD3-203ENST00000448878 KLHL5Q96PQ7 755 aa20.26■□□□□ 0.83
CHCHD3-203ENST00000448878 RIT2Q99578 217 aa20.26■□□□□ 0.83
CHCHD3-203ENST00000448878 KCNK12Q9HB15 430 aa20.26■□□□□ 0.83
CHCHD3-203ENST00000448878 C2CD2LO14523 706 aa20.25■□□□□ 0.83
CHCHD3-203ENST00000448878 ALDH2P05091 517 aa20.25■□□□□ 0.83
CHCHD3-203ENST00000448878 HMGB1P09429 215 aaKnown RBP20.25■□□□□ 0.83
CHCHD3-203ENST00000448878 MYBP10242 640 aa20.25■□□□□ 0.83
CHCHD3-203ENST00000448878 AOC1P19801 751 aa20.25■□□□□ 0.83
CHCHD3-203ENST00000448878 RCAN1P53805 252 aa20.25■□□□□ 0.83
CHCHD3-203ENST00000448878 ANGPT1Q15389 498 aa20.25■□□□□ 0.83
CHCHD3-203ENST00000448878 TARBP2Q15633 366 aaKnown RBP20.25■□□□□ 0.83
CHCHD3-203ENST00000448878 PTPN14Q15678 1187 aa20.25■□□□□ 0.83
CHCHD3-203ENST00000448878 XKR3Q5GH77 459 aa20.25■□□□□ 0.83
CHCHD3-203ENST00000448878 Q6ZUG5 572 aa20.25■□□□□ 0.83
CHCHD3-203ENST00000448878 ZNF280BQ86YH2 543 aa20.25■□□□□ 0.83
CHCHD3-203ENST00000448878 KSR1Q8IVT5 923 aa20.25■□□□□ 0.83
CHCHD3-203ENST00000448878 CCDC148Q8NFR7 591 aa20.25■□□□□ 0.83
CHCHD3-203ENST00000448878 BRF1Q92994 677 aa20.25■□□□□ 0.83
CHCHD3-203ENST00000448878 RTP3Q9BQQ7 232 aa20.25■□□□□ 0.83
CHCHD3-203ENST00000448878 WDR81Q562E7 1941 aa20.24■□□□□ 0.83
CHCHD3-203ENST00000448878 CFHP08603 1231 aa20.24■□□□□ 0.83
CHCHD3-203ENST00000448878 CNPP09543 421 aaKnown RBP20.24■□□□□ 0.83
CHCHD3-203ENST00000448878 GBP2P32456 591 aaPredicted RBP20.24■□□□□ 0.83
CHCHD3-203ENST00000448878 RAB27AP51159 221 aa20.24■□□□□ 0.83
CHCHD3-203ENST00000448878 USP11P51784 963 aa20.24■□□□□ 0.83
CHCHD3-203ENST00000448878 CLCN4P51793 760 aa20.24■□□□□ 0.83
CHCHD3-203ENST00000448878 NLRP5P59047 1200 aa20.24■□□□□ 0.83
CHCHD3-203ENST00000448878 LETM2Q2VYF4 491 aa20.24■□□□□ 0.83
CHCHD3-203ENST00000448878 ZNF410Q86VK4 478 aa20.24■□□□□ 0.83
CHCHD3-203ENST00000448878 DTWD2Q8NBA8 298 aa20.24■□□□□ 0.83
CHCHD3-203ENST00000448878 SLC5A5Q92911 643 aa20.24■□□□□ 0.83
CHCHD3-203ENST00000448878 TRAIPQ9BWF2 469 aa20.24■□□□□ 0.83
CHCHD3-203ENST00000448878 SLC26A6Q9BXS9 759 aa20.24■□□□□ 0.83
CHCHD3-203ENST00000448878 NIFKQ9BYG3 293 aaKnown RBP20.24■□□□□ 0.83
CHCHD3-203ENST00000448878 MRPL17Q9NRX2 175 aaKnown RBP20.24■□□□□ 0.83
CHCHD3-203ENST00000448878 VPS54Q9P1Q0 977 aa20.24■□□□□ 0.83
CHCHD3-203ENST00000448878 DUSP12Q9UNI6 340 aa20.24■□□□□ 0.83
CHCHD3-203ENST00000448878 FAN1Q9Y2M0 1017 aa20.24■□□□□ 0.83
CHCHD3-203ENST00000448878 NPR3P17342 541 aa20.23■□□□□ 0.83
CHCHD3-203ENST00000448878 AK2P54819 239 aa20.23■□□□□ 0.83
CHCHD3-203ENST00000448878 TSGA10IPQ3SY00 556 aa20.23■□□□□ 0.83
CHCHD3-203ENST00000448878 CCDC105Q8IYK2 499 aa20.23■□□□□ 0.83
CHCHD3-203ENST00000448878 VN1R3Q9BXE9 311 aa20.23■□□□□ 0.83
CHCHD3-203ENST00000448878 PCDHB2Q9Y5E7 798 aa20.23■□□□□ 0.83
CHCHD3-203ENST00000448878 NARSO43776 548 aaKnown RBP20.22■□□□□ 0.83
CHCHD3-203ENST00000448878 DDHD2O94830 711 aa20.22■□□□□ 0.83
CHCHD3-203ENST00000448878 ERMP1Q7Z2K6 904 aa20.22■□□□□ 0.83
CHCHD3-203ENST00000448878 TBCKQ8TEA7 893 aa20.22■□□□□ 0.83
CHCHD3-203ENST00000448878 STK39Q9UEW8 545 aa20.22■□□□□ 0.83
CHCHD3-203ENST00000448878 CACNA1HO95180 2353 aa20.22■□□□□ 0.83
CHCHD3-203ENST00000448878 CCDC195A0A1B0GUA6 201 aa20.21■□□□□ 0.83
CHCHD3-203ENST00000448878 ZNF623O75123 536 aa20.21■□□□□ 0.83
CHCHD3-203ENST00000448878 MAFO75444 373 aaPredicted RBP20.21■□□□□ 0.83
CHCHD3-203ENST00000448878 PSMD10O75832 226 aa20.21■□□□□ 0.83
CHCHD3-203ENST00000448878 POMCP01189 267 aa20.21■□□□□ 0.83
CHCHD3-203ENST00000448878 URODP06132 367 aa20.21■□□□□ 0.83
CHCHD3-203ENST00000448878 RDM1Q8NG50 284 aa20.21■□□□□ 0.83
CHCHD3-203ENST00000448878 RSAD2Q8WXG1 361 aa20.21■□□□□ 0.83
CHCHD3-203ENST00000448878 JPH2Q9BR39 696 aaPredicted RBP20.21■□□□□ 0.83
CHCHD3-203ENST00000448878 RSAD1Q9HA92 442 aa20.21■□□□□ 0.83
CHCHD3-203ENST00000448878 MAN1C1Q9NR34 630 aa20.21■□□□□ 0.83
CHCHD3-203ENST00000448878 IGSF9Q9P2J2 1179 aa20.21■□□□□ 0.83
CHCHD3-203ENST00000448878 KANSL3Q9P2N6 904 aa20.21■□□□□ 0.83
CHCHD3-203ENST00000448878 MYO15AQ9UKN7 3530 aa20.2■□□□□ 0.82
CHCHD3-203ENST00000448878 PTPRZ1P23471 2315 aaPredicted RBP20.2■□□□□ 0.82
CHCHD3-203ENST00000448878 IGKV6-21A0A0C4DH24 114 aa20.2■□□□□ 0.82
CHCHD3-203ENST00000448878 NRP1O14786 923 aa20.2■□□□□ 0.82
CHCHD3-203ENST00000448878 EDIL3O43854 480 aa20.2■□□□□ 0.82
CHCHD3-203ENST00000448878 B4GALT3O60512 393 aa20.2■□□□□ 0.82
CHCHD3-203ENST00000448878 SRGAP2CP0DJJ0 459 aa20.2■□□□□ 0.82
CHCHD3-203ENST00000448878 AFF1P51825 1210 aaKnown RBP20.2■□□□□ 0.82
CHCHD3-203ENST00000448878 NONOQ15233 471 aaKnown RBP eCLIP20.2■□□□□ 0.822e-6■■□□□ 12.7
CHCHD3-203ENST00000448878 PLA2G4FQ68DD2 849 aa20.2■□□□□ 0.82
CHCHD3-203ENST00000448878 ELMSAN1Q6PJG2 1045 aa20.2■□□□□ 0.82
CHCHD3-203ENST00000448878 AGMOQ6ZNB7 445 aa20.2■□□□□ 0.82
CHCHD3-203ENST00000448878 C15orf39Q6ZRI6 1047 aa20.2■□□□□ 0.82
CHCHD3-203ENST00000448878 JAKMIP1Q96N16 626 aaKnown RBP20.2■□□□□ 0.82
CHCHD3-203ENST00000448878 SLKQ9H2G2 1235 aaPredicted RBP20.2■□□□□ 0.82
CHCHD3-203ENST00000448878 CA14Q9ULX7 337 aa20.2■□□□□ 0.82
CHCHD3-203ENST00000448878 PRG3Q9Y2Y8 225 aaPredicted RBP20.2■□□□□ 0.82
CHCHD3-203ENST00000448878 TDP2O95551 362 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms