RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 FBXO18Q8NFZ0 1043 aa21.95■■□□□ 1.1
VCP-203ENST00000448530 MRPS27Q92552 414 aaKnown RBP21.95■■□□□ 1.1
VCP-203ENST00000448530 PGBD4Q96DM1 585 aa21.95■■□□□ 1.1
VCP-203ENST00000448530 KIF2CQ99661 725 aa21.95■■□□□ 1.1
VCP-203ENST00000448530 C1QTNF1Q9BXJ1 281 aa21.95■■□□□ 1.1
VCP-203ENST00000448530 UPF2Q9HAU5 1272 aaKnown RBP21.95■■□□□ 1.1
VCP-203ENST00000448530 AGPAT5Q9NUQ2 364 aa21.95■■□□□ 1.1
VCP-203ENST00000448530 FAM105AQ9NUU6 356 aa21.95■■□□□ 1.1
VCP-203ENST00000448530 SPG21Q9NZD8 308 aa21.95■■□□□ 1.1
VCP-203ENST00000448530 LZTS1Q9Y250 596 aa21.95■■□□□ 1.1
VCP-203ENST00000448530 FSD2A1L4K1 749 aa21.94■■□□□ 1.1
VCP-203ENST00000448530 LINC01565O15544 149 aa21.94■■□□□ 1.1
VCP-203ENST00000448530 ATF7P17544 494 aaPredicted RBP21.94■■□□□ 1.1
VCP-203ENST00000448530 PLCB3Q01970 1234 aa21.94■■□□□ 1.1
VCP-203ENST00000448530 ORC2Q13416 577 aaPredicted RBP21.94■■□□□ 1.1
VCP-203ENST00000448530 TFDP1Q14186 410 aa21.94■■□□□ 1.1
VCP-203ENST00000448530 GJD3Q8N144 294 aa21.94■■□□□ 1.1
VCP-203ENST00000448530 TMEM60Q9H2L4 133 aa21.94■■□□□ 1.1
VCP-203ENST00000448530 ENTPD7Q9NQZ7 604 aa21.94■■□□□ 1.1
VCP-203ENST00000448530 CD207Q9UJ71 328 aa21.94■■□□□ 1.1
VCP-203ENST00000448530 NOL7Q9UMY1 257 aaKnown RBP21.94■■□□□ 1.1
VCP-203ENST00000448530 PCDHGC5Q9Y5F6 944 aa21.94■■□□□ 1.1
VCP-203ENST00000448530 POTEMA6NI47 508 aa21.93■■□□□ 1.1
VCP-203ENST00000448530 ST18O60284 1047 aa21.93■■□□□ 1.1
VCP-203ENST00000448530 TBX10O75333 385 aa21.93■■□□□ 1.1
VCP-203ENST00000448530 DGAT1O75907 488 aa21.93■■□□□ 1.1
VCP-203ENST00000448530 ERLIN2O94905 339 aa21.93■■□□□ 1.1
VCP-203ENST00000448530 ALDH7A1P49419 539 aaKnown RBP21.93■■□□□ 1.1
VCP-203ENST00000448530 ERVFC1P60507 584 aa21.93■■□□□ 1.1
VCP-203ENST00000448530 DLX2Q07687 328 aaPredicted RBP21.93■■□□□ 1.1
VCP-203ENST00000448530 NCBP1Q09161 790 aaKnown RBP21.93■■□□□ 1.1
VCP-203ENST00000448530 RABEP1Q15276 862 aa21.93■■□□□ 1.1
VCP-203ENST00000448530 ZNF174Q15697 407 aa21.93■■□□□ 1.1
VCP-203ENST00000448530 LONRF3Q496Y0 759 aa21.93■■□□□ 1.1
VCP-203ENST00000448530 ERMNQ8TAM6 284 aa21.93■■□□□ 1.1
VCP-203ENST00000448530 LPPQ93052 612 aa21.93■■□□□ 1.1
VCP-203ENST00000448530 PRKAG3Q9UGI9 489 aa21.93■■□□□ 1.1
VCP-203ENST00000448530 CARNS1A5YM72 827 aa21.92■■□□□ 1.1
VCP-203ENST00000448530 ZNF623O75123 536 aa21.92■■□□□ 1.1
VCP-203ENST00000448530 OR52Z1P0C646 297 aa21.92■■□□□ 1.1
VCP-203ENST00000448530 XRCC6P12956 609 aaKnown RBP eCLIP21.92■■□□□ 1.1
VCP-203ENST00000448530 PBX3P40426 434 aa21.92■■□□□ 1.1
VCP-203ENST00000448530 RNASELQ05823 741 aaKnown RBP21.92■■□□□ 1.1
VCP-203ENST00000448530 SMAD4Q13485 552 aaKnown RBP21.92■■□□□ 1.1
VCP-203ENST00000448530 PLPP4Q5VZY2 271 aa21.92■■□□□ 1.1
VCP-203ENST00000448530 NOSTRINQ8IVI9 506 aa21.92■■□□□ 1.1
VCP-203ENST00000448530 PIGOQ8TEQ8 1089 aa21.92■■□□□ 1.1
VCP-203ENST00000448530 CDCA3Q99618 268 aaPredicted RBP21.92■■□□□ 1.1
VCP-203ENST00000448530 TCF25Q9BQ70 676 aa21.92■■□□□ 1.1
VCP-203ENST00000448530 MINDY3Q9H8M7 445 aa21.92■■□□□ 1.1
VCP-203ENST00000448530 TUFT1Q9NNX1 390 aa21.92■■□□□ 1.1
VCP-203ENST00000448530 INPP5FQ9Y2H2 1132 aa21.92■■□□□ 1.1
VCP-203ENST00000448530 KIF3AQ9Y496 699 aa21.92■■□□□ 1.1
VCP-203ENST00000448530 PCDHB2Q9Y5E7 798 aa21.92■■□□□ 1.1
VCP-203ENST00000448530 PER2O15055 1255 aa21.91■■□□□ 1.1
VCP-203ENST00000448530 MBTPS2O43462 519 aa21.91■■□□□ 1.1
VCP-203ENST00000448530 SRGAP2BP0DMP2 458 aa21.91■■□□□ 1.1
VCP-203ENST00000448530 TECP42680 631 aa21.91■■□□□ 1.1
VCP-203ENST00000448530 RARRES1P49788 294 aa21.91■■□□□ 1.1
VCP-203ENST00000448530 BMS1Q14692 1282 aaKnown RBP21.91■■□□□ 1.1
VCP-203ENST00000448530 PCBP1Q15365 356 aaKnown RBP eCLIP21.91■■□□□ 1.1
VCP-203ENST00000448530 NOMO2Q5JPE7 1267 aa21.91■■□□□ 1.1
VCP-203ENST00000448530 TTC38Q5R3I4 469 aa21.91■■□□□ 1.1
VCP-203ENST00000448530 TMC7Q7Z402 723 aa21.91■■□□□ 1.1
VCP-203ENST00000448530 URGCPQ8TCY9 931 aa21.91■■□□□ 1.1
VCP-203ENST00000448530 NGRNQ9NPE2 291 aaKnown RBP21.91■■□□□ 1.1
VCP-203ENST00000448530 CD320Q9NPF0 282 aa21.91■■□□□ 1.1
VCP-203ENST00000448530 XPNPEP1Q9NQW7 623 aa21.91■■□□□ 1.1
VCP-203ENST00000448530 INO80B-WBP1J3KQ70 363 aa21.9■■□□□ 1.1
VCP-203ENST00000448530 FSCN2O14926 492 aa21.9■■□□□ 1.1
VCP-203ENST00000448530 ZC3H11AO75152 810 aaKnown RBP eCLIP21.9■■□□□ 1.1
VCP-203ENST00000448530 TRAPPC10P48553 1259 aa21.9■■□□□ 1.1
VCP-203ENST00000448530 BCAR1P56945 870 aa21.9■■□□□ 1.1
VCP-203ENST00000448530 SLC39A11Q8N1S5 342 aa21.9■■□□□ 1.1
VCP-203ENST00000448530 TMEM169Q96HH4 297 aa21.9■■□□□ 1.1
VCP-203ENST00000448530 POP1Q99575 1024 aaKnown RBP21.9■■□□□ 1.1
VCP-203ENST00000448530 USO1O60763 962 aaKnown RBP21.89■■□□□ 1.09
VCP-203ENST00000448530 AXLP30530 894 aa21.89■■□□□ 1.09
VCP-203ENST00000448530 PTENP60484 403 aa21.89■■□□□ 1.09
VCP-203ENST00000448530 POU5F1BQ06416 359 aa21.89■■□□□ 1.09
VCP-203ENST00000448530 SMAD2Q15796 467 aaKnown RBP21.89■■□□□ 1.09
VCP-203ENST00000448530 DUSP6Q16828 381 aa21.89■■□□□ 1.09
VCP-203ENST00000448530 CATSPER3Q86XQ3 398 aa21.89■■□□□ 1.09
VCP-203ENST00000448530 ADHFE1Q8IWW8 467 aa21.89■■□□□ 1.09
VCP-203ENST00000448530 CNNM3Q8NE01 707 aa21.89■■□□□ 1.09
VCP-203ENST00000448530 NACC1Q96RE7 527 aa21.89■■□□□ 1.09
VCP-203ENST00000448530 POLR3CQ9BUI4 534 aaPredicted RBP21.89■■□□□ 1.09
VCP-203ENST00000448530 EPHX3Q9H6B9 360 aa21.89■■□□□ 1.09
VCP-203ENST00000448530 CNTNAP2Q9UHC6 1331 aa21.88■■□□□ 1.09
VCP-203ENST00000448530 A0A087WWV3 80 aa21.88■■□□□ 1.09
VCP-203ENST00000448530 OFD1O75665 1012 aa21.88■■□□□ 1.09
VCP-203ENST00000448530 SPATA31C1P0DKV0 1188 aa21.88■■□□□ 1.09
VCP-203ENST00000448530 HOXA11P31270 313 aaPredicted RBP21.88■■□□□ 1.09
VCP-203ENST00000448530 CA8P35219 290 aa21.88■■□□□ 1.09
VCP-203ENST00000448530 ZP2Q05996 745 aa21.88■■□□□ 1.09
VCP-203ENST00000448530 SMC1AQ14683 1233 aaKnown RBP21.88■■□□□ 1.09
VCP-203ENST00000448530 NOTUMQ6P988 496 aa21.88■■□□□ 1.09
VCP-203ENST00000448530 ASAP3Q8TDY4 903 aa21.88■■□□□ 1.09
VCP-203ENST00000448530 CCDC51Q96ER9 411 aa21.88■■□□□ 1.09
VCP-203ENST00000448530 MSLNLQ96KJ4 702 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms