RNA–Protein interactions for RNA: ENST00000448078.1

USP49-205, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 3

Gene USP49, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-205ENST00000448078 RAB3GAP1Q15042 981 aa7.23□□□□□ -1.25
USP49-205ENST00000448078 BICRALQ6AI39 1079 aa7.23□□□□□ -1.25
USP49-205ENST00000448078 HHIPL2Q6UWX4 724 aa7.23□□□□□ -1.25
USP49-205ENST00000448078 FAM151AQ8WW52 585 aa7.23□□□□□ -1.25
USP49-205ENST00000448078 RCC1LQ96I51 464 aaKnown RBP7.23□□□□□ -1.25
USP49-205ENST00000448078 JMJD8Q96S16 334 aa7.23□□□□□ -1.25
USP49-205ENST00000448078 PLCD4Q9BRC7 762 aa7.23□□□□□ -1.25
USP49-205ENST00000448078 IFT57Q9NWB7 429 aa7.23□□□□□ -1.25
USP49-205ENST00000448078 SIRT5Q9NXA8 310 aa7.23□□□□□ -1.25
USP49-205ENST00000448078 ZHX2Q9Y6X8 837 aa7.23□□□□□ -1.25
USP49-205ENST00000448078 NPHP3-ACAD11A0A0J9YXS1 232 aa7.22□□□□□ -1.25
USP49-205ENST00000448078 TCAF2A6NFQ2 919 aa7.22□□□□□ -1.25
USP49-205ENST00000448078 NUDT19A8MXV4 375 aa7.22□□□□□ -1.25
USP49-205ENST00000448078 AURKAO14965 403 aa7.22□□□□□ -1.25
USP49-205ENST00000448078 FGF10O15520 208 aaPredicted RBP7.22□□□□□ -1.25
USP49-205ENST00000448078 IGKV5-2P06315 115 aa7.22□□□□□ -1.25
USP49-205ENST00000448078 C8AP07357 584 aa7.22□□□□□ -1.25
USP49-205ENST00000448078 PNLIPP16233 465 aa7.22□□□□□ -1.25
USP49-205ENST00000448078 PAMP19021 973 aa7.22□□□□□ -1.25
USP49-205ENST00000448078 TACR1P25103 407 aa7.22□□□□□ -1.25
USP49-205ENST00000448078 CTGFP29279 349 aa7.22□□□□□ -1.25
USP49-205ENST00000448078 L1CAMP32004 1257 aa7.22□□□□□ -1.25
USP49-205ENST00000448078 RAP1GAPP47736 663 aa7.22□□□□□ -1.25
USP49-205ENST00000448078 CHAF1AQ13111 956 aaPredicted RBP7.22□□□□□ -1.25
USP49-205ENST00000448078 GRB10Q13322 594 aa7.22□□□□□ -1.25
USP49-205ENST00000448078 NLRX1Q86UT6 975 aa7.22□□□□□ -1.25
USP49-205ENST00000448078 CABP7Q86V35 215 aa7.22□□□□□ -1.25
USP49-205ENST00000448078 CCDC146Q8IYE0 955 aa7.22□□□□□ -1.25
USP49-205ENST00000448078 ARHGEF39Q8N4T4 335 aa7.22□□□□□ -1.25
USP49-205ENST00000448078 LINS1Q8NG48 757 aa7.22□□□□□ -1.25
USP49-205ENST00000448078 CDX2Q99626 313 aaPredicted RBP7.22□□□□□ -1.25
USP49-205ENST00000448078 CRTAC1Q9NQ79 661 aa7.22□□□□□ -1.25
USP49-205ENST00000448078 SSC5DA1L4H1 1573 aa7.21□□□□□ -1.25
USP49-205ENST00000448078 TRBV23OR9-2A0A075B6M9 112 aa7.21□□□□□ -1.26
USP49-205ENST00000448078 SUSD5O60279 629 aa7.21□□□□□ -1.26
USP49-205ENST00000448078 GLRX3O76003 335 aaKnown RBP7.21□□□□□ -1.26
USP49-205ENST00000448078 GJB6O95452 261 aa7.21□□□□□ -1.26
USP49-205ENST00000448078 FOSL2P15408 326 aa7.21□□□□□ -1.26
USP49-205ENST00000448078 ECI1P42126 302 aa7.21□□□□□ -1.26
USP49-205ENST00000448078 TMEM62Q0P6H9 643 aa7.21□□□□□ -1.26
USP49-205ENST00000448078 SCRN1Q12765 414 aa7.21□□□□□ -1.26
USP49-205ENST00000448078 KIR3DS1Q14943 382 aa7.21□□□□□ -1.26
USP49-205ENST00000448078 SLCO6A1Q86UG4 719 aa7.21□□□□□ -1.26
USP49-205ENST00000448078 CPNE8Q86YQ8 564 aa7.21□□□□□ -1.26
USP49-205ENST00000448078 ANKRD13CQ8N6S4 541 aa7.21□□□□□ -1.26
USP49-205ENST00000448078 WDR66Q8TBY9 1149 aa7.21□□□□□ -1.26
USP49-205ENST00000448078 LGR4Q9BXB1 951 aa7.21□□□□□ -1.26
USP49-205ENST00000448078 GOLGA2P5Q9HBQ8 144 aa7.21□□□□□ -1.26
USP49-205ENST00000448078 C9orf78Q9NZ63 289 aaPredicted RBP7.21□□□□□ -1.26
USP49-205ENST00000448078 ZNF112Q9UJU3 913 aa7.21□□□□□ -1.26
USP49-205ENST00000448078 OGDHLQ9ULD0 1010 aa7.21□□□□□ -1.26
USP49-205ENST00000448078 ZNF281Q9Y2X9 895 aa7.21□□□□□ -1.26
USP49-205ENST00000448078 MROH5Q6ZUA9 1318 aa7.21□□□□□ -1.26
USP49-205ENST00000448078 ZNF646O15015 1829 aaPredicted RBP7.2□□□□□ -1.26
USP49-205ENST00000448078 A0A0G2JLL6 359 aaPredicted RBP7.2□□□□□ -1.26
USP49-205ENST00000448078 SNAP23O00161 211 aa7.2□□□□□ -1.26
USP49-205ENST00000448078 CTNND1O60716 968 aaKnown RBP7.2□□□□□ -1.26
USP49-205ENST00000448078 SNRPB2P08579 225 aaKnown RBP7.2□□□□□ -1.26
USP49-205ENST00000448078 PLA2G5P39877 138 aa7.2□□□□□ -1.26
USP49-205ENST00000448078 GYG1P46976 350 aa7.2□□□□□ -1.26
USP49-205ENST00000448078 CACNB3P54284 484 aa7.2□□□□□ -1.26
USP49-205ENST00000448078 SRSF3P84103 164 aaKnown RBP7.2□□□□□ -1.26
USP49-205ENST00000448078 TCP10Q12799 353 aa7.2□□□□□ -1.26
USP49-205ENST00000448078 FAM110CQ1W6H9 321 aa7.2□□□□□ -1.26
USP49-205ENST00000448078 RCSD1Q6JBY9 416 aa7.2□□□□□ -1.26
USP49-205ENST00000448078 LMBR1LQ6UX01 489 aa7.2□□□□□ -1.26
USP49-205ENST00000448078 PRRT2Q7Z6L0 340 aaPredicted RBP7.2□□□□□ -1.26
USP49-205ENST00000448078 SCYL3Q8IZE3 742 aa7.2□□□□□ -1.26
USP49-205ENST00000448078 DIS3LQ8TF46 1054 aaKnown RBP7.2□□□□□ -1.26
USP49-205ENST00000448078 DNAAF4Q8WXU2 420 aa7.2□□□□□ -1.26
USP49-205ENST00000448078 FAM84BQ96KN1 310 aaPredicted RBP7.2□□□□□ -1.26
USP49-205ENST00000448078 GUCD1Q96NT3 240 aa7.2□□□□□ -1.26
USP49-205ENST00000448078 SP110Q9HB58 689 aa7.2□□□□□ -1.26
USP49-205ENST00000448078 IGSF5Q9NSI5 407 aa7.2□□□□□ -1.26
USP49-205ENST00000448078 USP40Q9NVE5 1235 aa7.2□□□□□ -1.26
USP49-205ENST00000448078 GNL3LQ9NVN8 582 aaKnown RBP7.2□□□□□ -1.26
USP49-205ENST00000448078 CLEC1BQ9P126 229 aa7.2□□□□□ -1.26
USP49-205ENST00000448078 SUSD2Q9UGT4 822 aa7.2□□□□□ -1.26
USP49-205ENST00000448078 PSME4Q14997 1843 aa7.2□□□□□ -1.26
USP49-205ENST00000448078 IFIT1P09914 478 aaKnown RBP7.19□□□□□ -1.26
USP49-205ENST00000448078 SMAD3P84022 425 aaKnown RBP7.19□□□□□ -1.26
USP49-205ENST00000448078 GTF2IRD2BQ6EKJ0 949 aa7.19□□□□□ -1.26
USP49-205ENST00000448078 APOBEC3HQ6NTF7 200 aaKnown RBP7.19□□□□□ -1.26
USP49-205ENST00000448078 GTF2IRD2Q86UP8 949 aa7.19□□□□□ -1.26
USP49-205ENST00000448078 C8orf58Q8NAV2 365 aa7.19□□□□□ -1.26
USP49-205ENST00000448078 ARRDC4Q8NCT1 418 aa7.19□□□□□ -1.26
USP49-205ENST00000448078 MICAL1Q8TDZ2 1067 aa7.19□□□□□ -1.26
USP49-205ENST00000448078 BTN2A2Q8WVV5 523 aa7.19□□□□□ -1.26
USP49-205ENST00000448078 SOCS4Q8WXH5 440 aa7.19□□□□□ -1.26
USP49-205ENST00000448078 C1QTNF1Q9BXJ1 281 aa7.19□□□□□ -1.26
USP49-205ENST00000448078 KRTAP4-8Q9BYQ9 185 aa7.19□□□□□ -1.26
USP49-205ENST00000448078 GPRC5CQ9NQ84 441 aa7.19□□□□□ -1.26
USP49-205ENST00000448078 AGTPBP1Q9UPW5 1226 aa7.19□□□□□ -1.26
USP49-205ENST00000448078 EMC9Q9Y3B6 208 aa7.19□□□□□ -1.26
USP49-205ENST00000448078 BRCA2P51587 3418 aa7.18□□□□□ -1.26
USP49-205ENST00000448078 TRIM75PA6NK02 468 aa7.18□□□□□ -1.26
USP49-205ENST00000448078 ABLIM1O14639 778 aa7.18□□□□□ -1.26
USP49-205ENST00000448078 NPHS1O60500 1241 aa7.18□□□□□ -1.26
USP49-205ENST00000448078 MSCO60682 206 aa7.18□□□□□ -1.26
USP49-205ENST00000448078 ITGAVP06756 1048 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms