RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 GPR62Q9BZJ7 368 aa4.51□□□□□ -1.69
PMS1-216ENST00000447734 FOXP3Q9BZS1 431 aa4.51□□□□□ -1.69
PMS1-216ENST00000447734 TRIT1Q9H3H1 467 aaKnown RBP4.51□□□□□ -1.69
PMS1-216ENST00000447734 ARMT1Q9H993 441 aa4.51□□□□□ -1.69
PMS1-216ENST00000447734 ZNF287Q9HBT7 754 aa4.51□□□□□ -1.69
PMS1-216ENST00000447734 ALG13Q9NP73 1137 aaKnown RBP4.51□□□□□ -1.69
PMS1-216ENST00000447734 ITM2CQ9NQX7 267 aa4.51□□□□□ -1.69
PMS1-216ENST00000447734 MARCH2Q9P0N8 246 aa4.51□□□□□ -1.69
PMS1-216ENST00000447734 OGDHLQ9ULD0 1010 aa4.51□□□□□ -1.69
PMS1-216ENST00000447734 ZNF281Q9Y2X9 895 aa4.51□□□□□ -1.69
PMS1-216ENST00000447734 A0A088AWK7 358 aa4.5□□□□□ -1.69
PMS1-216ENST00000447734 UBA6A0AVT1 1052 aaPredicted RBP4.5□□□□□ -1.69
PMS1-216ENST00000447734 KIAA1324LA8MWY0 1029 aaPredicted RBP4.5□□□□□ -1.69
PMS1-216ENST00000447734 K7ENM7 598 aa4.5□□□□□ -1.69
PMS1-216ENST00000447734 ELL2O00472 640 aaPredicted RBP4.5□□□□□ -1.69
PMS1-216ENST00000447734 KRIT1O00522 736 aa4.5□□□□□ -1.69
PMS1-216ENST00000447734 DDX3XO00571 662 aaKnown RBP eCLIP4.5□□□□□ -1.697e-11■■■□□ 18.9
PMS1-216ENST00000447734 APOL1O14791 398 aa4.5□□□□□ -1.69
PMS1-216ENST00000447734 FOXP2O15409 715 aa4.5□□□□□ -1.69
PMS1-216ENST00000447734 ANP32CO43423 234 aa4.5□□□□□ -1.69
PMS1-216ENST00000447734 MAFKO60675 156 aa4.5□□□□□ -1.69
PMS1-216ENST00000447734 BAIAP3O94812 1187 aa4.5□□□□□ -1.69
PMS1-216ENST00000447734 IL18RAPO95256 599 aa4.5□□□□□ -1.69
PMS1-216ENST00000447734 TAL1P17542 331 aaPredicted RBP4.5□□□□□ -1.69
PMS1-216ENST00000447734 FSTP19883 344 aa4.5□□□□□ -1.69
PMS1-216ENST00000447734 PDIA3P30101 505 aaKnown RBP4.5□□□□□ -1.69
PMS1-216ENST00000447734 SDHAP31040 664 aa4.5□□□□□ -1.69
PMS1-216ENST00000447734 GJA4P35212 333 aa4.5□□□□□ -1.69
PMS1-216ENST00000447734 HSPA7P48741 367 aa4.5□□□□□ -1.69
PMS1-216ENST00000447734 TERF1P54274 439 aa4.5□□□□□ -1.69
PMS1-216ENST00000447734 ARL4CP56559 192 aa4.5□□□□□ -1.69
PMS1-216ENST00000447734 PRKG2Q13237 762 aa4.5□□□□□ -1.69
PMS1-216ENST00000447734 GRM1Q13255 1194 aa4.5□□□□□ -1.69
PMS1-216ENST00000447734 TUSC3Q13454 348 aa4.5□□□□□ -1.69
PMS1-216ENST00000447734 DAG1Q14118 895 aa4.5□□□□□ -1.69
PMS1-216ENST00000447734 FGL2Q14314 439 aa4.5□□□□□ -1.69
PMS1-216ENST00000447734 CATSPEREQ5SY80 951 aa4.5□□□□□ -1.69
PMS1-216ENST00000447734 THEMIS2Q5TEJ8 643 aa4.5□□□□□ -1.69
PMS1-216ENST00000447734 TIGD7Q6NT04 549 aaPredicted RBP4.5□□□□□ -1.69
PMS1-216ENST00000447734 PDXDC1Q6P996 788 aa4.5□□□□□ -1.69
PMS1-216ENST00000447734 KLHDC10Q6PID8 442 aa4.5□□□□□ -1.69
PMS1-216ENST00000447734 C16orf54Q6UWD8 224 aa4.5□□□□□ -1.69
PMS1-216ENST00000447734 C4orf50Q6ZRC1 276 aa4.5□□□□□ -1.69
PMS1-216ENST00000447734 MIGA2Q7L4E1 593 aa4.5□□□□□ -1.69
PMS1-216ENST00000447734 COLGALT2Q8IYK4 626 aa4.5□□□□□ -1.69
PMS1-216ENST00000447734 CACNA2D3Q8IZS8 1091 aa4.5□□□□□ -1.69
PMS1-216ENST00000447734 Q8N1Y9 231 aa4.5□□□□□ -1.69
PMS1-216ENST00000447734 AGGF1Q8N302 714 aaeCLIP4.5□□□□□ -1.69
PMS1-216ENST00000447734 MFSD4AQ8N468 514 aa4.5□□□□□ -1.69
PMS1-216ENST00000447734 USHBP1Q8N6Y0 703 aa4.5□□□□□ -1.69
PMS1-216ENST00000447734 UHMK1Q8TAS1 419 aaKnown RBP4.5□□□□□ -1.69
PMS1-216ENST00000447734 DPF3Q92784 378 aa4.5□□□□□ -1.69
PMS1-216ENST00000447734 ERCC4Q92889 916 aaPredicted RBP4.5□□□□□ -1.69
PMS1-216ENST00000447734 KAT5Q92993 513 aa4.5□□□□□ -1.69
PMS1-216ENST00000447734 HDAC10Q969S8 669 aa4.5□□□□□ -1.69
PMS1-216ENST00000447734 TUBGCP5Q96RT8 1024 aa4.5□□□□□ -1.69
PMS1-216ENST00000447734 SERINC2Q96SA4 455 aa4.5□□□□□ -1.69
PMS1-216ENST00000447734 RMDN3Q96TC7 470 aa4.5□□□□□ -1.69
PMS1-216ENST00000447734 MYL10Q9BUA6 226 aa4.5□□□□□ -1.69
PMS1-216ENST00000447734 UNKQ9C0B0 810 aaKnown RBP4.5□□□□□ -1.69
PMS1-216ENST00000447734 RSPH9Q9H1X1 276 aaPredicted RBP4.5□□□□□ -1.69
PMS1-216ENST00000447734 ZMAT3Q9HA38 289 aaKnown RBP4.5□□□□□ -1.69
PMS1-216ENST00000447734 SLC6A20Q9NP91 592 aa4.5□□□□□ -1.69
PMS1-216ENST00000447734 BLOC1S4Q9NUP1 217 aa4.5□□□□□ -1.69
PMS1-216ENST00000447734 LRFN1Q9P244 771 aa4.5□□□□□ -1.69
PMS1-216ENST00000447734 GRHPRQ9UBQ7 328 aa4.5□□□□□ -1.69
PMS1-216ENST00000447734 CCDC39Q9UFE4 941 aa4.5□□□□□ -1.69
PMS1-216ENST00000447734 STAP2Q9UGK3 403 aa4.5□□□□□ -1.69
PMS1-216ENST00000447734 NUB1Q9Y5A7 615 aa4.5□□□□□ -1.69
PMS1-216ENST00000447734 CFAP20Q9Y6A4 193 aaKnown RBP4.5□□□□□ -1.69
PMS1-216ENST00000447734 CAPN6Q9Y6Q1 641 aa4.5□□□□□ -1.69
PMS1-216ENST00000447734 A0A1W2PPL8 197 aa4.49□□□□□ -1.69
PMS1-216ENST00000447734 PRAMEF25A6NGN4 478 aa4.49□□□□□ -1.69
PMS1-216ENST00000447734 PRR33A8MZF0 331 aa4.49□□□□□ -1.69
PMS1-216ENST00000447734 C22orf46C9J442 243 aa4.49□□□□□ -1.69
PMS1-216ENST00000447734 ORC4O43929 436 aa4.49□□□□□ -1.69
PMS1-216ENST00000447734 BUB1BO60566 1050 aaPredicted RBP4.49□□□□□ -1.69
PMS1-216ENST00000447734 LEFTY1O75610 366 aa4.49□□□□□ -1.69
PMS1-216ENST00000447734 PRPF6O94906 941 aaKnown RBP4.49□□□□□ -1.69
PMS1-216ENST00000447734 RPLP2P05387 115 aaKnown RBP4.49□□□□□ -1.69
PMS1-216ENST00000447734 THP07101 528 aa4.49□□□□□ -1.69
PMS1-216ENST00000447734 PARP1P09874 1014 aaKnown RBP4.49□□□□□ -1.69
PMS1-216ENST00000447734 ZNF865P0CJ78 1059 aaPredicted RBP4.49□□□□□ -1.69
PMS1-216ENST00000447734 VDRP11473 427 aa4.49□□□□□ -1.69
PMS1-216ENST00000447734 SRFP11831 508 aa4.49□□□□□ -1.69
PMS1-216ENST00000447734 HARSP12081 509 aaKnown RBP4.49□□□□□ -1.69
PMS1-216ENST00000447734 VEGFAP15692 232 aaPredicted RBP4.49□□□□□ -1.69
PMS1-216ENST00000447734 ELF1P32519 619 aa4.49□□□□□ -1.69
PMS1-216ENST00000447734 ALDH9A1P49189 494 aa4.49□□□□□ -1.69
PMS1-216ENST00000447734 MALLQ13021 153 aa4.49□□□□□ -1.69
PMS1-216ENST00000447734 POSTNQ15063 836 aa4.49□□□□□ -1.69
PMS1-216ENST00000447734 TAF5Q15542 800 aa4.49□□□□□ -1.69
PMS1-216ENST00000447734 MPEG1Q2M385 716 aa4.49□□□□□ -1.69
PMS1-216ENST00000447734 ZACNQ401N2 412 aa4.49□□□□□ -1.69
PMS1-216ENST00000447734 CCDC184Q52MB2 194 aa4.49□□□□□ -1.69
PMS1-216ENST00000447734 FAM133BQ5BKY9 247 aaKnown RBP4.49□□□□□ -1.69
PMS1-216ENST00000447734 CIAPIN1Q6FI81 312 aa4.49□□□□□ -1.69
PMS1-216ENST00000447734 C22orf34Q6ZV56 151 aa4.49□□□□□ -1.69
PMS1-216ENST00000447734 KCTD1Q719H9 257 aa4.49□□□□□ -1.69
PMS1-216ENST00000447734 KRT77Q7Z794 578 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms