RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 SLC24A5Q71RS6 500 aa13.19□□□□□ -0.3
RFC4-208ENST00000447345 GPBP1Q86WP2 473 aa13.19□□□□□ -0.3
RFC4-208ENST00000447345 NPAS4Q8IUM7 802 aa13.19□□□□□ -0.3
RFC4-208ENST00000447345 ZBTB8OSQ8IWT0 167 aa13.19□□□□□ -0.3
RFC4-208ENST00000447345 PDILTQ8N807 584 aa13.19□□□□□ -0.3
RFC4-208ENST00000447345 SYT2Q8N9I0 419 aaPredicted RBP13.19□□□□□ -0.3
RFC4-208ENST00000447345 DEPTORQ8TB45 409 aa13.19□□□□□ -0.3
RFC4-208ENST00000447345 RAD54LQ92698 747 aa13.19□□□□□ -0.3
RFC4-208ENST00000447345 CPB2Q96IY4 423 aa13.19□□□□□ -0.3
RFC4-208ENST00000447345 IFT74Q96LB3 600 aa13.19□□□□□ -0.3
RFC4-208ENST00000447345 GUCD1Q96NT3 240 aa13.19□□□□□ -0.3
RFC4-208ENST00000447345 PANK2Q9BZ23 570 aa13.19□□□□□ -0.3
RFC4-208ENST00000447345 SEMA6BQ9H3T3 888 aa13.19□□□□□ -0.3
RFC4-208ENST00000447345 BLOC1S4Q9NUP1 217 aa13.19□□□□□ -0.3
RFC4-208ENST00000447345 AGPAT5Q9NUQ2 364 aa13.19□□□□□ -0.3
RFC4-208ENST00000447345 CFAP45Q9UL16 551 aa13.19□□□□□ -0.3
RFC4-208ENST00000447345 INSL6Q9Y581 213 aa13.19□□□□□ -0.3
RFC4-208ENST00000447345 PCDHB7Q9Y5E2 793 aa13.19□□□□□ -0.3
RFC4-208ENST00000447345 TRIP11Q15643 1979 aa13.19□□□□□ -0.3
RFC4-208ENST00000447345 TRANK1O15050 2925 aa13.19□□□□□ -0.3
RFC4-208ENST00000447345 TMEM265A0A087WTH1 108 aa13.18□□□□□ -0.3
RFC4-208ENST00000447345 LINC01553A4QN01 128 aa13.18□□□□□ -0.3
RFC4-208ENST00000447345 CCDC169A6NNP5 214 aa13.18□□□□□ -0.3
RFC4-208ENST00000447345 C9IYK1 514 aa13.18□□□□□ -0.3
RFC4-208ENST00000447345 B4GALT5O43286 388 aa13.18□□□□□ -0.3
RFC4-208ENST00000447345 TSPAN1O60635 241 aa13.18□□□□□ -0.3
RFC4-208ENST00000447345 CUTAO60888 179 aa13.18□□□□□ -0.3
RFC4-208ENST00000447345 KRT18P05783 430 aaKnown RBP13.18□□□□□ -0.3
RFC4-208ENST00000447345 STAG3L1P0CL83 205 aa13.18□□□□□ -0.3
RFC4-208ENST00000447345 FGFR1P11362 822 aa13.18□□□□□ -0.3
RFC4-208ENST00000447345 STAT6P42226 847 aa13.18□□□□□ -0.3
RFC4-208ENST00000447345 NAMPTP43490 491 aa13.18□□□□□ -0.3
RFC4-208ENST00000447345 PEX3P56589 373 aa13.18□□□□□ -0.3
RFC4-208ENST00000447345 KRT85P78386 507 aa13.18□□□□□ -0.3
RFC4-208ENST00000447345 MAPK7Q13164 816 aa13.18□□□□□ -0.3
RFC4-208ENST00000447345 GRIN2CQ14957 1233 aa13.18□□□□□ -0.3
RFC4-208ENST00000447345 PPP2R5AQ15172 486 aa13.18□□□□□ -0.3
RFC4-208ENST00000447345 RRAGBQ5VZM2 374 aa13.18□□□□□ -0.3
RFC4-208ENST00000447345 C1orf186Q6ZWK4 172 aa13.18□□□□□ -0.3
RFC4-208ENST00000447345 DAW1Q8N136 415 aa13.18□□□□□ -0.3
RFC4-208ENST00000447345 KCNG4Q8TDN1 519 aa13.18□□□□□ -0.3
RFC4-208ENST00000447345 ARNTL2Q8WYA1 636 aa13.18□□□□□ -0.3
RFC4-208ENST00000447345 LARP4BQ92615 738 aaKnown RBP13.18□□□□□ -0.3
RFC4-208ENST00000447345 KIFAP3Q92845 792 aa13.18□□□□□ -0.3
RFC4-208ENST00000447345 DRC1Q96MC2 740 aa13.18□□□□□ -0.3
RFC4-208ENST00000447345 PRDM12Q9H4Q4 367 aa13.18□□□□□ -0.3
RFC4-208ENST00000447345 DACT1Q9NYF0 836 aa13.18□□□□□ -0.3
RFC4-208ENST00000447345 MORC2Q9Y6X9 1032 aaPredicted RBP13.18□□□□□ -0.3
RFC4-208ENST00000447345 A0A087X0B3 334 aa13.17□□□□□ -0.3
RFC4-208ENST00000447345 SFI1A8K8P3 1242 aa13.17□□□□□ -0.3
RFC4-208ENST00000447345 DGKIO75912 1065 aa13.17□□□□□ -0.3
RFC4-208ENST00000447345 DMP1Q13316 513 aaPredicted RBP13.17□□□□□ -0.3
RFC4-208ENST00000447345 BTG3Q14201 252 aaPredicted RBP13.17□□□□□ -0.3
RFC4-208ENST00000447345 TMEM132AQ24JP5 1023 aa13.17□□□□□ -0.3
RFC4-208ENST00000447345 CDCA2Q69YH5 1023 aaPredicted RBP13.17□□□□□ -0.3
RFC4-208ENST00000447345 ATL3Q6DD88 541 aa13.17□□□□□ -0.3
RFC4-208ENST00000447345 SHC4Q6S5L8 630 aa13.17□□□□□ -0.3
RFC4-208ENST00000447345 CDR2LQ86X02 465 aaPredicted RBP13.17□□□□□ -0.3
RFC4-208ENST00000447345 ECHDC2Q86YB7 292 aa13.17□□□□□ -0.3
RFC4-208ENST00000447345 KCTD17Q8N5Z5 321 aa13.17□□□□□ -0.3
RFC4-208ENST00000447345 MYLIPQ8WY64 445 aa13.17□□□□□ -0.3
RFC4-208ENST00000447345 LPPQ93052 612 aa13.17□□□□□ -0.3
RFC4-208ENST00000447345 SPATA32Q96LK8 384 aa13.17□□□□□ -0.3
RFC4-208ENST00000447345 CDX2Q99626 313 aaPredicted RBP13.17□□□□□ -0.3
RFC4-208ENST00000447345 REEP2Q9BRK0 252 aa13.17□□□□□ -0.3
RFC4-208ENST00000447345 C17orf80Q9BSJ5 609 aa13.17□□□□□ -0.3
RFC4-208ENST00000447345 ZHX3Q9H4I2 956 aa13.17□□□□□ -0.3
RFC4-208ENST00000447345 RC3H2Q9HBD1 1191 aaKnown RBP13.17□□□□□ -0.3
RFC4-208ENST00000447345 TMEM161AQ9NX61 479 aa13.17□□□□□ -0.3
RFC4-208ENST00000447345 MTMR10Q9NXD2 777 aa13.17□□□□□ -0.3
RFC4-208ENST00000447345 PCDHA7Q9UN72 937 aa13.17□□□□□ -0.3
RFC4-208ENST00000447345 USP20Q9Y2K6 914 aa13.17□□□□□ -0.3
RFC4-208ENST00000447345 CITO14578 2027 aa13.17□□□□□ -0.3
RFC4-208ENST00000447345 EPOPA6NHQ4 379 aa13.16□□□□□ -0.3
RFC4-208ENST00000447345 TBKBP1A7MCY6 615 aa13.16□□□□□ -0.3
RFC4-208ENST00000447345 RFXAPO00287 272 aa13.16□□□□□ -0.3
RFC4-208ENST00000447345 PRKCBP05771 671 aa13.16□□□□□ -0.3
RFC4-208ENST00000447345 ATF7P17544 494 aaPredicted RBP13.16□□□□□ -0.3
RFC4-208ENST00000447345 GUCY2CP25092 1073 aa13.16□□□□□ -0.3
RFC4-208ENST00000447345 NPTX2P47972 431 aa13.16□□□□□ -0.3
RFC4-208ENST00000447345 POU5F1BQ06416 359 aa13.16□□□□□ -0.3
RFC4-208ENST00000447345 AMHR2Q16671 573 aa13.16□□□□□ -0.3
RFC4-208ENST00000447345 NAALADL2Q58DX5 795 aa13.16□□□□□ -0.3
RFC4-208ENST00000447345 ARSHQ5FYA8 562 aa13.16□□□□□ -0.3
RFC4-208ENST00000447345 AXDND1Q5T1B0 1012 aaPredicted RBP13.16□□□□□ -0.3
RFC4-208ENST00000447345 CCDC73Q6ZRK6 1079 aa13.16□□□□□ -0.3
RFC4-208ENST00000447345 IFNLR1Q8IU57 520 aaPredicted RBP13.16□□□□□ -0.3
RFC4-208ENST00000447345 CRIPAKQ8N1N5 446 aa13.16□□□□□ -0.3
RFC4-208ENST00000447345 FIBCD1Q8N539 461 aa13.16□□□□□ -0.3
RFC4-208ENST00000447345 SP7Q8TDD2 431 aaPredicted RBP13.16□□□□□ -0.3
RFC4-208ENST00000447345 GDPD5Q8WTR4 605 aa13.16□□□□□ -0.3
RFC4-208ENST00000447345 NFKBIZQ9BYH8 718 aa13.16□□□□□ -0.3
RFC4-208ENST00000447345 C2orf40Q9H1Z8 148 aa13.16□□□□□ -0.3
RFC4-208ENST00000447345 GDPD2Q9HCC8 539 aa13.16□□□□□ -0.3
RFC4-208ENST00000447345 KMT5AQ9NQR1 393 aa13.16□□□□□ -0.3
RFC4-208ENST00000447345 CHST12Q9NRB3 414 aa13.16□□□□□ -0.3
RFC4-208ENST00000447345 FAM105AQ9NUU6 356 aa13.16□□□□□ -0.3
RFC4-208ENST00000447345 HCSTQ9UBK5 93 aa13.16□□□□□ -0.3
RFC4-208ENST00000447345 STK17AQ9UEE5 414 aa13.16□□□□□ -0.3
RFC4-208ENST00000447345 ATP6V1DQ9Y5K8 247 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms