RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 MCPH1Q8NEM0 835 aa19.01■□□□□ 0.63
SMC6-206ENST00000446852 LMO3Q8TAP4 145 aa19.01■□□□□ 0.63
SMC6-206ENST00000446852 PACSIN1Q9BY11 444 aa19.01■□□□□ 0.63
SMC6-206ENST00000446852 C17orf75Q9HAS0 396 aa19.01■□□□□ 0.63
SMC6-206ENST00000446852 SIP14410 1827 aa19.01■□□□□ 0.63
SMC6-206ENST00000446852 ADRB2P07550 413 aa19.01■□□□□ 0.63
SMC6-206ENST00000446852 EAPPQ56P03 285 aaPredicted RBP19.01■□□□□ 0.63
SMC6-206ENST00000446852 HVCN1Q96D96 273 aa19.01■□□□□ 0.63
SMC6-206ENST00000446852 ATP6V0A4Q9HBG4 840 aa19.01■□□□□ 0.63
SMC6-206ENST00000446852 ZNF302Q9NR11 478 aa19.01■□□□□ 0.63
SMC6-206ENST00000446852 BZW2Q9Y6E2 419 aaKnown RBP19.01■□□□□ 0.63
SMC6-206ENST00000446852 GOLGA8IPA6NC78 632 aa19■□□□□ 0.63
SMC6-206ENST00000446852 GOLGA8JA6NMD2 632 aa19■□□□□ 0.63
SMC6-206ENST00000446852 F8VZ95 297 aa19■□□□□ 0.63
SMC6-206ENST00000446852 Q3C1V9 767 aa19■□□□□ 0.63
SMC6-206ENST00000446852 SLC39A4Q6P5W5 647 aa19■□□□□ 0.63
SMC6-206ENST00000446852 FGD4Q96M96 766 aa19■□□□□ 0.63
SMC6-206ENST00000446852 GPR88Q9GZN0 384 aa19■□□□□ 0.63
SMC6-206ENST00000446852 DNAJC12Q9UKB3 198 aa19■□□□□ 0.63
SMC6-206ENST00000446852 JRKLQ9Y4A0 524 aa19■□□□□ 0.63
SMC6-206ENST00000446852 BUB1O43683 1085 aa19■□□□□ 0.63
SMC6-206ENST00000446852 FARP2O94887 1054 aaPredicted RBP19■□□□□ 0.63
SMC6-206ENST00000446852 PGK2P07205 417 aa19■□□□□ 0.63
SMC6-206ENST00000446852 CNGA1P29973 690 aa19■□□□□ 0.63
SMC6-206ENST00000446852 GJA5P36382 358 aa19■□□□□ 0.63
SMC6-206ENST00000446852 GPAT2Q6NUI2 795 aa19■□□□□ 0.63
SMC6-206ENST00000446852 TXLNBQ8N3L3 684 aa19■□□□□ 0.63
SMC6-206ENST00000446852 POLR3FQ9H1D9 316 aaPredicted RBP19■□□□□ 0.63
SMC6-206ENST00000446852 APEX2Q9UBZ4 518 aa19■□□□□ 0.63
SMC6-206ENST00000446852 EXOC7Q9UPT5 735 aa19■□□□□ 0.63
SMC6-206ENST00000446852 IGKV6D-21A0A0A0MT36 114 aa18.99■□□□□ 0.63
SMC6-206ENST00000446852 CTAGE15A4D2H0 777 aa18.99■□□□□ 0.63
SMC6-206ENST00000446852 MAPK13O15264 365 aa18.99■□□□□ 0.63
SMC6-206ENST00000446852 GFPT2O94808 682 aa18.99■□□□□ 0.63
SMC6-206ENST00000446852 OATP04181 439 aa18.99■□□□□ 0.63
SMC6-206ENST00000446852 CTAGE8P0CG41 777 aa18.99■□□□□ 0.63
SMC6-206ENST00000446852 RTP1P59025 263 aa18.99■□□□□ 0.63
SMC6-206ENST00000446852 PHLDB3Q6NSJ2 640 aa18.99■□□□□ 0.63
SMC6-206ENST00000446852 EEPD1Q7L9B9 569 aa18.99■□□□□ 0.63
SMC6-206ENST00000446852 CTAGE6Q86UF2 777 aa18.99■□□□□ 0.63
SMC6-206ENST00000446852 CBWD2Q8IUF1 395 aa18.99■□□□□ 0.63
SMC6-206ENST00000446852 CTAGE4Q8IX94 777 aa18.99■□□□□ 0.63
SMC6-206ENST00000446852 SAAL1Q96ER3 474 aa18.99■□□□□ 0.63
SMC6-206ENST00000446852 PCYT2Q99447 389 aa18.99■□□□□ 0.63
SMC6-206ENST00000446852 STK33Q9BYT3 514 aa18.99■□□□□ 0.63
SMC6-206ENST00000446852 TAF1DQ9H5J8 278 aaPredicted RBP18.99■□□□□ 0.63
SMC6-206ENST00000446852 GSTTP1A0A1W2PQM5 241 aa18.99■□□□□ 0.63
SMC6-206ENST00000446852 LRRN2O75325 713 aa18.99■□□□□ 0.63
SMC6-206ENST00000446852 KLRC1P26715 233 aa18.99■□□□□ 0.63
SMC6-206ENST00000446852 GCLMP48507 274 aa18.99■□□□□ 0.63
SMC6-206ENST00000446852 DRAP1Q14919 205 aaPredicted RBP18.99■□□□□ 0.63
SMC6-206ENST00000446852 EMC2Q15006 297 aa18.99■□□□□ 0.63
SMC6-206ENST00000446852 TAS1R3Q7RTX0 852 aa18.99■□□□□ 0.63
SMC6-206ENST00000446852 NOA1Q8NC60 698 aaKnown RBP18.99■□□□□ 0.63
SMC6-206ENST00000446852 OLIG1Q8TAK6 271 aa18.99■□□□□ 0.63
SMC6-206ENST00000446852 MMS19Q96T76 1030 aa18.99■□□□□ 0.63
SMC6-206ENST00000446852 PARD6BQ9BYG5 372 aa18.99■□□□□ 0.63
SMC6-206ENST00000446852 ANKZF1Q9H8Y5 726 aa18.99■□□□□ 0.63
SMC6-206ENST00000446852 LUC7LQ9NQ29 371 aaKnown RBP18.99■□□□□ 0.63
SMC6-206ENST00000446852 NENFQ9UMX5 172 aa18.99■□□□□ 0.63
SMC6-206ENST00000446852 GLTPD2A6NH11 291 aa18.98■□□□□ 0.63
SMC6-206ENST00000446852 ZNF185O15231 689 aa18.98■□□□□ 0.63
SMC6-206ENST00000446852 EVI5O60447 810 aa18.98■□□□□ 0.63
SMC6-206ENST00000446852 SLC25A27O95847 323 aa18.98■□□□□ 0.63
SMC6-206ENST00000446852 STAT1P42224 750 aa18.98■□□□□ 0.63
SMC6-206ENST00000446852 NAB2Q15742 525 aa18.98■□□□□ 0.63
SMC6-206ENST00000446852 SNRNP35Q16560 246 aaKnown RBP18.98■□□□□ 0.63
SMC6-206ENST00000446852 KIAA0753Q2KHM9 967 aa18.98■□□□□ 0.63
SMC6-206ENST00000446852 RNF10Q8N5U6 811 aaKnown RBP18.98■□□□□ 0.63
SMC6-206ENST00000446852 CAPZA3Q96KX2 299 aa18.98■□□□□ 0.63
SMC6-206ENST00000446852 ALS2CR12Q96Q35 445 aa18.98■□□□□ 0.63
SMC6-206ENST00000446852 NAGPAQ9UK23 515 aa18.98■□□□□ 0.63
SMC6-206ENST00000446852 SOCS7O14512 581 aa18.98■□□□□ 0.63
SMC6-206ENST00000446852 FERP16591 822 aa18.98■□□□□ 0.63
SMC6-206ENST00000446852 SOX5P35711 763 aa18.98■□□□□ 0.63
SMC6-206ENST00000446852 ARMC9Q7Z3E5 817 aa18.98■□□□□ 0.63
SMC6-206ENST00000446852 DNAAF5Q86Y56 855 aa18.98■□□□□ 0.63
SMC6-206ENST00000446852 NOX5Q96PH1 765 aa18.98■□□□□ 0.63
SMC6-206ENST00000446852 ARHGAP28Q9P2N2 729 aa18.98■□□□□ 0.63
SMC6-206ENST00000446852 SNX12Q9UMY4 172 aa18.98■□□□□ 0.63
SMC6-206ENST00000446852 POLGP54098 1239 aaPredicted RBP18.97■□□□□ 0.63
SMC6-206ENST00000446852 MCCD1P59942 119 aaPredicted RBP18.97■□□□□ 0.63
SMC6-206ENST00000446852 EPC2Q52LR7 807 aa18.97■□□□□ 0.63
SMC6-206ENST00000446852 LDLRAD1Q5T700 205 aa18.97■□□□□ 0.63
SMC6-206ENST00000446852 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.97■□□□□ 0.63
SMC6-206ENST00000446852 FASTKD5Q7L8L6 764 aaKnown RBP18.97■□□□□ 0.63
SMC6-206ENST00000446852 CEP89Q96ST8 783 aa18.97■□□□□ 0.63
SMC6-206ENST00000446852 LY6KQ17RY6 165 aa18.97■□□□□ 0.63
SMC6-206ENST00000446852 TMEM143Q96AN5 459 aa18.97■□□□□ 0.63
SMC6-206ENST00000446852 DHX33Q9H6R0 707 aaKnown RBP18.97■□□□□ 0.63
SMC6-206ENST00000446852 DDX41Q9UJV9 622 aaKnown RBP18.97■□□□□ 0.63
SMC6-206ENST00000446852 ARIH2O95376 493 aa18.96■□□□□ 0.63
SMC6-206ENST00000446852 GGPS1O95749 300 aa18.96■□□□□ 0.63
SMC6-206ENST00000446852 IFT74Q96LB3 600 aa18.96■□□□□ 0.63
SMC6-206ENST00000446852 TMEM117Q9H0C3 514 aa18.96■□□□□ 0.63
SMC6-206ENST00000446852 ARGLU1Q9NWB6 273 aaPredicted RBP18.96■□□□□ 0.63
SMC6-206ENST00000446852 DNAJC25-GNG10A0A024R161 153 aa18.96■□□□□ 0.63
SMC6-206ENST00000446852 SPDYE4A6NLX3 237 aa18.96■□□□□ 0.63
SMC6-206ENST00000446852 PDE2AO00408 941 aaPredicted RBP18.96■□□□□ 0.63
SMC6-206ENST00000446852 DDX3XO00571 662 aaKnown RBP eCLIP18.96■□□□□ 0.632e-8■■■■□ 24.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms