RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 SALL4Q9UJQ4 1053 aa10.37□□□□□ -0.75
COL6A4P1-201ENST00000446690 KCNH4Q9UQ05 1017 aa10.37□□□□□ -0.75
COL6A4P1-201ENST00000446690 SYNGAP1Q96PV0 1343 aa10.37□□□□□ -0.75
COL6A4P1-201ENST00000446690 FAM170AA1A519 330 aa10.36□□□□□ -0.75
COL6A4P1-201ENST00000446690 CTAGE15A4D2H0 777 aa10.36□□□□□ -0.75
COL6A4P1-201ENST00000446690 SPDYE4A6NLX3 237 aa10.36□□□□□ -0.75
COL6A4P1-201ENST00000446690 SLC25A27O95847 323 aa10.36□□□□□ -0.75
COL6A4P1-201ENST00000446690 OATP04181 439 aa10.36□□□□□ -0.75
COL6A4P1-201ENST00000446690 POTEJP0CG39 1038 aa10.36□□□□□ -0.75
COL6A4P1-201ENST00000446690 CTAGE8P0CG41 777 aa10.36□□□□□ -0.75
COL6A4P1-201ENST00000446690 CYP2C8P10632 490 aa10.36□□□□□ -0.75
COL6A4P1-201ENST00000446690 ADSSP30520 456 aa10.36□□□□□ -0.75
COL6A4P1-201ENST00000446690 STAT1P42224 750 aa10.36□□□□□ -0.75
COL6A4P1-201ENST00000446690 AMPD2Q01433 879 aa10.36□□□□□ -0.75
COL6A4P1-201ENST00000446690 PPP3CAQ08209 521 aa10.36□□□□□ -0.75
COL6A4P1-201ENST00000446690 CETN1Q12798 172 aa10.36□□□□□ -0.75
COL6A4P1-201ENST00000446690 DRAP1Q14919 205 aaPredicted RBP10.36□□□□□ -0.75
COL6A4P1-201ENST00000446690 MAP1SQ66K74 1059 aaPredicted RBP10.36□□□□□ -0.75
COL6A4P1-201ENST00000446690 RSRC2Q7L4I2 434 aaKnown RBP10.36□□□□□ -0.75
COL6A4P1-201ENST00000446690 TRAPPC11Q7Z392 1133 aa10.36□□□□□ -0.75
COL6A4P1-201ENST00000446690 CTAGE6Q86UF2 777 aa10.36□□□□□ -0.75
COL6A4P1-201ENST00000446690 CBWD2Q8IUF1 395 aa10.36□□□□□ -0.75
COL6A4P1-201ENST00000446690 CTAGE4Q8IX94 777 aa10.36□□□□□ -0.75
COL6A4P1-201ENST00000446690 TXLNBQ8N3L3 684 aa10.36□□□□□ -0.75
COL6A4P1-201ENST00000446690 POMGNT1Q8WZA1 660 aa10.36□□□□□ -0.75
COL6A4P1-201ENST00000446690 ALS2CR12Q96Q35 445 aa10.36□□□□□ -0.75
COL6A4P1-201ENST00000446690 PACSIN1Q9BY11 444 aa10.36□□□□□ -0.75
COL6A4P1-201ENST00000446690 XPNPEP1Q9NQW7 623 aa10.36□□□□□ -0.75
COL6A4P1-201ENST00000446690 USP20Q9Y2K6 914 aa10.36□□□□□ -0.75
COL6A4P1-201ENST00000446690 MAFBQ9Y5Q3 323 aaPredicted RBP10.36□□□□□ -0.75
COL6A4P1-201ENST00000446690 BZW2Q9Y6E2 419 aaKnown RBP10.36□□□□□ -0.75
COL6A4P1-201ENST00000446690 RBAK-RBAKDNI3L0D1 243 aa10.36□□□□□ -0.75
COL6A4P1-201ENST00000446690 HNRNPDLO14979 420 aaKnown RBP10.36□□□□□ -0.75
COL6A4P1-201ENST00000446690 ZNF185O15231 689 aa10.36□□□□□ -0.75
COL6A4P1-201ENST00000446690 LRRN2O75325 713 aa10.36□□□□□ -0.75
COL6A4P1-201ENST00000446690 FARP2O94887 1054 aaPredicted RBP10.36□□□□□ -0.75
COL6A4P1-201ENST00000446690 ATG7O95352 703 aa10.36□□□□□ -0.75
COL6A4P1-201ENST00000446690 GGPS1O95749 300 aa10.36□□□□□ -0.75
COL6A4P1-201ENST00000446690 GJA5P36382 358 aa10.36□□□□□ -0.75
COL6A4P1-201ENST00000446690 NEDD9Q14511 834 aa10.36□□□□□ -0.75
COL6A4P1-201ENST00000446690 EMC2Q15006 297 aa10.36□□□□□ -0.75
COL6A4P1-201ENST00000446690 SNRNP35Q16560 246 aaKnown RBP10.36□□□□□ -0.75
COL6A4P1-201ENST00000446690 MAP4K3Q8IVH8 894 aa10.36□□□□□ -0.75
COL6A4P1-201ENST00000446690 CAGE1Q8TC20 777 aa10.36□□□□□ -0.75
COL6A4P1-201ENST00000446690 NOX5Q96PH1 765 aa10.36□□□□□ -0.75
COL6A4P1-201ENST00000446690 PSMB7Q99436 277 aa10.36□□□□□ -0.75
COL6A4P1-201ENST00000446690 MPHOSPH6Q99547 160 aaKnown RBP10.36□□□□□ -0.75
COL6A4P1-201ENST00000446690 POP1Q99575 1024 aaKnown RBP10.36□□□□□ -0.75
COL6A4P1-201ENST00000446690 NTPCRQ9BSD7 190 aaKnown RBP10.36□□□□□ -0.75
COL6A4P1-201ENST00000446690 C17orf75Q9HAS0 396 aa10.36□□□□□ -0.75
COL6A4P1-201ENST00000446690 GSTTP1A0A1W2PQM5 241 aa10.35□□□□□ -0.75
COL6A4P1-201ENST00000446690 IQCA1LA6NCM1 817 aa10.35□□□□□ -0.75
COL6A4P1-201ENST00000446690 RHOXF2BP0C7M4 288 aa10.35□□□□□ -0.75
COL6A4P1-201ENST00000446690 EDNRBP24530 442 aa10.35□□□□□ -0.75
COL6A4P1-201ENST00000446690 MARK3P27448 753 aa10.35□□□□□ -0.75
COL6A4P1-201ENST00000446690 STAT5BP51692 787 aa10.35□□□□□ -0.75
COL6A4P1-201ENST00000446690 JAM2P57087 298 aa10.35□□□□□ -0.75
COL6A4P1-201ENST00000446690 SNAPC2Q13487 334 aa10.35□□□□□ -0.75
COL6A4P1-201ENST00000446690 MOGSQ13724 837 aa10.35□□□□□ -0.75
COL6A4P1-201ENST00000446690 PAPD7Q5XG87 772 aaKnown RBP10.35□□□□□ -0.75
COL6A4P1-201ENST00000446690 PHLDB3Q6NSJ2 640 aa10.35□□□□□ -0.75
COL6A4P1-201ENST00000446690 GPAT2Q6NUI2 795 aa10.35□□□□□ -0.75
COL6A4P1-201ENST00000446690 C12orf56Q8IXR9 622 aa10.35□□□□□ -0.75
COL6A4P1-201ENST00000446690 GPR161Q8N6U8 529 aaKnown RBP10.35□□□□□ -0.75
COL6A4P1-201ENST00000446690 SPIRE2Q8WWL2 714 aa10.35□□□□□ -0.75
COL6A4P1-201ENST00000446690 RABGGTAQ92696 567 aa10.35□□□□□ -0.75
COL6A4P1-201ENST00000446690 RHOXF2Q9BQY4 288 aa10.35□□□□□ -0.75
COL6A4P1-201ENST00000446690 PARD6BQ9BYG5 372 aa10.35□□□□□ -0.75
COL6A4P1-201ENST00000446690 STK33Q9BYT3 514 aa10.35□□□□□ -0.75
COL6A4P1-201ENST00000446690 UBE2TQ9NPD8 197 aaPredicted RBP10.35□□□□□ -0.75
COL6A4P1-201ENST00000446690 PDLIM7Q9NR12 457 aa10.35□□□□□ -0.75
COL6A4P1-201ENST00000446690 ARGLU1Q9NWB6 273 aaPredicted RBP10.35□□□□□ -0.75
COL6A4P1-201ENST00000446690 APEX2Q9UBZ4 518 aa10.35□□□□□ -0.75
COL6A4P1-201ENST00000446690 FBXL5Q9UKA1 691 aa10.35□□□□□ -0.75
COL6A4P1-201ENST00000446690 JRKLQ9Y4A0 524 aa10.35□□□□□ -0.75
COL6A4P1-201ENST00000446690 ADGRA3Q8IWK6 1321 aa10.35□□□□□ -0.75
COL6A4P1-201ENST00000446690 IGSF9BQ9UPX0 1349 aa10.35□□□□□ -0.75
COL6A4P1-201ENST00000446690 WDR90Q96KV7 1748 aa10.35□□□□□ -0.75
COL6A4P1-201ENST00000446690 LRRIQ4A6NIV6 560 aa10.35□□□□□ -0.75
COL6A4P1-201ENST00000446690 F8VZ95 297 aa10.35□□□□□ -0.75
COL6A4P1-201ENST00000446690 PJA2O43164 708 aa10.35□□□□□ -0.75
COL6A4P1-201ENST00000446690 EVI5O60447 810 aa10.35□□□□□ -0.75
COL6A4P1-201ENST00000446690 ADRB2P07550 413 aa10.35□□□□□ -0.75
COL6A4P1-201ENST00000446690 FERP16591 822 aa10.35□□□□□ -0.75
COL6A4P1-201ENST00000446690 KLRC1P26715 233 aa10.35□□□□□ -0.75
COL6A4P1-201ENST00000446690 SOX5P35711 763 aa10.35□□□□□ -0.75
COL6A4P1-201ENST00000446690 TCF7P36402 384 aaPredicted RBP10.35□□□□□ -0.75
COL6A4P1-201ENST00000446690 CLCN6P51797 869 aa10.35□□□□□ -0.75
COL6A4P1-201ENST00000446690 SNRPFP62306 86 aaKnown RBP10.35□□□□□ -0.75
COL6A4P1-201ENST00000446690 MAP2K1Q02750 393 aaPredicted RBP10.35□□□□□ -0.75
COL6A4P1-201ENST00000446690 VPS36Q86VN1 386 aa10.35□□□□□ -0.75
COL6A4P1-201ENST00000446690 PLEKHO2Q8TD55 490 aa10.35□□□□□ -0.75
COL6A4P1-201ENST00000446690 SLC7A3Q8WY07 619 aa10.35□□□□□ -0.75
COL6A4P1-201ENST00000446690 GLG1Q92896 1179 aa10.35□□□□□ -0.75
COL6A4P1-201ENST00000446690 NRBP2Q9NSY0 501 aa10.35□□□□□ -0.75
COL6A4P1-201ENST00000446690 TMCO5BA8MYB1 307 aa10.34□□□□□ -0.75
COL6A4P1-201ENST00000446690 NOP56O00567 594 aaKnown RBP10.34□□□□□ -0.75
COL6A4P1-201ENST00000446690 NCK2O43639 380 aa10.34□□□□□ -0.75
COL6A4P1-201ENST00000446690 ARIH2O95376 493 aa10.34□□□□□ -0.75
COL6A4P1-201ENST00000446690 DLATP10515 647 aaKnown RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms