RNA–Protein interactions for RNA: ENST00000446425.2

UBXN2A-203, Transcript of UBX domain protein 2A, humanhuman

TSL 1 (best)

Gene UBXN2A, Length 2,195 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN2A-203ENST00000446425 SEC63Q9UGP8 760 aaKnown RBP18.2■□□□□ 0.5
UBXN2A-203ENST00000446425 AJAP1Q9UKB5 411 aaPredicted RBP18.2■□□□□ 0.5
UBXN2A-203ENST00000446425 POTEFA5A3E0 1075 aa18.19■□□□□ 0.5
UBXN2A-203ENST00000446425 TDP2O95551 362 aa18.19■□□□□ 0.5
UBXN2A-203ENST00000446425 GGPS1O95749 300 aa18.19■□□□□ 0.5
UBXN2A-203ENST00000446425 POTEIP0CG38 1075 aa18.19■□□□□ 0.5
UBXN2A-203ENST00000446425 POTEJP0CG39 1038 aa18.19■□□□□ 0.5
UBXN2A-203ENST00000446425 TSPY3P0CV98 308 aa18.19■□□□□ 0.5
UBXN2A-203ENST00000446425 TSPY8P0CW00 308 aa18.19■□□□□ 0.5
UBXN2A-203ENST00000446425 LONRF1Q17RB8 773 aa18.19■□□□□ 0.5
UBXN2A-203ENST00000446425 TMEM154Q6P9G4 183 aa18.19■□□□□ 0.5
UBXN2A-203ENST00000446425 POTEEQ6S8J3 1075 aa18.19■□□□□ 0.5
UBXN2A-203ENST00000446425 OTUD6AQ7L8S5 288 aa18.19■□□□□ 0.5
UBXN2A-203ENST00000446425 ANKRD42Q8N9B4 389 aa18.19■□□□□ 0.5
UBXN2A-203ENST00000446425 NT5C3AQ9H0P0 336 aa18.19■□□□□ 0.5
UBXN2A-203ENST00000446425 TMX4Q9H1E5 349 aaPredicted RBP18.19■□□□□ 0.5
UBXN2A-203ENST00000446425 TRAF3IP3Q9Y228 551 aa18.19■□□□□ 0.5
UBXN2A-203ENST00000446425 C2CD2Q9Y426 696 aa18.19■□□□□ 0.5
UBXN2A-203ENST00000446425 PFASO15067 1338 aa18.19■□□□□ 0.5
UBXN2A-203ENST00000446425 EDIL3O43854 480 aa18.18■□□□□ 0.5
UBXN2A-203ENST00000446425 PDHA1P08559 390 aa18.18■□□□□ 0.5
UBXN2A-203ENST00000446425 CREB1P16220 341 aa18.18■□□□□ 0.5
UBXN2A-203ENST00000446425 IL6STP40189 918 aaPredicted RBP18.18■□□□□ 0.5
UBXN2A-203ENST00000446425 INTS8Q75QN2 995 aaKnown RBP18.18■□□□□ 0.5
UBXN2A-203ENST00000446425 SLC17A8Q8NDX2 589 aa18.18■□□□□ 0.5
UBXN2A-203ENST00000446425 CFAP61Q8NHU2 1237 aa18.18■□□□□ 0.5
UBXN2A-203ENST00000446425 OLIG1Q8TAK6 271 aa18.18■□□□□ 0.5
UBXN2A-203ENST00000446425 ALG3Q92685 438 aa18.18■□□□□ 0.5
UBXN2A-203ENST00000446425 NUDCD1Q96RS6 583 aa18.18■□□□□ 0.5
UBXN2A-203ENST00000446425 VCXQ9H320 206 aa18.18■□□□□ 0.5
UBXN2A-203ENST00000446425 PLCG2P16885 1265 aa18.18■□□□□ 0.5
UBXN2A-203ENST00000446425 STX2P32856 288 aa18.18■□□□□ 0.5
UBXN2A-203ENST00000446425 SETDB1Q15047 1291 aa18.18■□□□□ 0.5
UBXN2A-203ENST00000446425 CCDC137Q6PK04 289 aaKnown RBP18.18■□□□□ 0.5
UBXN2A-203ENST00000446425 FAM13CQ8NE31 585 aa18.18■□□□□ 0.5
UBXN2A-203ENST00000446425 GDAP1Q8TB36 358 aa18.18■□□□□ 0.5
UBXN2A-203ENST00000446425 DNAJC9Q8WXX5 260 aa18.18■□□□□ 0.5
UBXN2A-203ENST00000446425 CPVLQ9H3G5 476 aa18.18■□□□□ 0.5
UBXN2A-203ENST00000446425 RGL1Q9NZL6 768 aa18.18■□□□□ 0.5
UBXN2A-203ENST00000446425 RPL26L1Q9UNX3 145 aaKnown RBP18.18■□□□□ 0.5
UBXN2A-203ENST00000446425 KDM3AQ9Y4C1 1321 aa18.17■□□□□ 0.5
UBXN2A-203ENST00000446425 SCN7AQ01118 1682 aa18.17■□□□□ 0.5
UBXN2A-203ENST00000446425 DCCP43146 1447 aa18.17■□□□□ 0.5
UBXN2A-203ENST00000446425 MIF4GDA9UHW6 222 aaKnown RBP18.17■□□□□ 0.5
UBXN2A-203ENST00000446425 TTLL1O95922 423 aa18.17■□□□□ 0.5
UBXN2A-203ENST00000446425 SP100P23497 879 aaPredicted RBP18.17■□□□□ 0.5
UBXN2A-203ENST00000446425 PPP1R15BQ5SWA1 713 aa18.17■□□□□ 0.5
UBXN2A-203ENST00000446425 TTC27Q6P3X3 843 aa18.17■□□□□ 0.5
UBXN2A-203ENST00000446425 ARHGEF18Q6ZSZ5 1173 aa18.17■□□□□ 0.5
UBXN2A-203ENST00000446425 FAM43BQ6ZT52 329 aaPredicted RBP18.17■□□□□ 0.5
UBXN2A-203ENST00000446425 VSIG1Q86XK7 387 aa18.17■□□□□ 0.5
UBXN2A-203ENST00000446425 FAM84BQ96KN1 310 aaPredicted RBP18.17■□□□□ 0.5
UBXN2A-203ENST00000446425 MYLK2Q9H1R3 596 aa18.17■□□□□ 0.5
UBXN2A-203ENST00000446425 METTL14Q9HCE5 456 aaKnown RBP18.17■□□□□ 0.5
UBXN2A-203ENST00000446425 ROBO3Q96MS0 1386 aa18.17■□□□□ 0.5
UBXN2A-203ENST00000446425 IGSF9BQ9UPX0 1349 aa18.17■□□□□ 0.5
UBXN2A-203ENST00000446425 GTPBP10A4D1E9 387 aaKnown RBP18.17■□□□□ 0.5
UBXN2A-203ENST00000446425 LMNAP02545 664 aaKnown RBP18.17■□□□□ 0.5
UBXN2A-203ENST00000446425 BRAFP15056 766 aa18.17■□□□□ 0.5
UBXN2A-203ENST00000446425 PTDSS1P48651 473 aaKnown RBP18.17■□□□□ 0.5
UBXN2A-203ENST00000446425 MPP2Q14168 576 aa18.17■□□□□ 0.5
UBXN2A-203ENST00000446425 RRP1BQ14684 758 aaKnown RBP18.17■□□□□ 0.5
UBXN2A-203ENST00000446425 IRGCQ6NXR0 463 aa18.17■□□□□ 0.5
UBXN2A-203ENST00000446425 GLYCTKQ8IVS8 523 aa18.17■□□□□ 0.5
UBXN2A-203ENST00000446425 ZNF444Q8N0Y2 327 aaPredicted RBP18.17■□□□□ 0.5
UBXN2A-203ENST00000446425 UBL4BQ8N7F7 174 aa18.17■□□□□ 0.5
UBXN2A-203ENST00000446425 RBBP8NLQ8NC74 664 aaPredicted RBP18.17■□□□□ 0.5
UBXN2A-203ENST00000446425 DYNLL2Q96FJ2 89 aa18.17■□□□□ 0.5
UBXN2A-203ENST00000446425 CRAMP1Q96RY5 1269 aa18.17■□□□□ 0.5
UBXN2A-203ENST00000446425 PIDD1Q9HB75 910 aa18.17■□□□□ 0.5
UBXN2A-203ENST00000446425 MLXIPLQ9NP71 852 aa18.17■□□□□ 0.5
UBXN2A-203ENST00000446425 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.17■□□□□ 0.54e-6■■■■■ 58.9
UBXN2A-203ENST00000446425 CTTNBP2NLQ9P2B4 639 aa18.17■□□□□ 0.5
UBXN2A-203ENST00000446425 STX8Q9UNK0 236 aa18.17■□□□□ 0.5
UBXN2A-203ENST00000446425 PLA2G4BP0C869 781 aa18.16■□□□□ 0.5
UBXN2A-203ENST00000446425 RXRBP28702 533 aa18.16■□□□□ 0.5
UBXN2A-203ENST00000446425 SOX5P35711 763 aa18.16■□□□□ 0.5
UBXN2A-203ENST00000446425 POLGP54098 1239 aaPredicted RBP18.16■□□□□ 0.5
UBXN2A-203ENST00000446425 CYP1B1Q16678 543 aa18.16■□□□□ 0.5
UBXN2A-203ENST00000446425 GPBP1Q86WP2 473 aa18.16■□□□□ 0.5
UBXN2A-203ENST00000446425 RPS6KC1Q96S38 1066 aa18.16■□□□□ 0.5
UBXN2A-203ENST00000446425 MXD3Q9BW11 206 aa18.16■□□□□ 0.5
UBXN2A-203ENST00000446425 PITPNM3Q9BZ71 974 aa18.16■□□□□ 0.5
UBXN2A-203ENST00000446425 CDC42EP4Q9H3Q1 356 aaKnown RBP18.16■□□□□ 0.5
UBXN2A-203ENST00000446425 TMOD4Q9NZQ9 345 aa18.16■□□□□ 0.5
UBXN2A-203ENST00000446425 GCNT4Q9P109 453 aa18.16■□□□□ 0.5
UBXN2A-203ENST00000446425 NPHP3-ACAD11A0A0J9YXS1 232 aa18.15■□□□□ 0.5
UBXN2A-203ENST00000446425 hCG_1984214I3L0E3 225 aa18.15■□□□□ 0.5
UBXN2A-203ENST00000446425 GH1P01241 217 aa18.15■□□□□ 0.5
UBXN2A-203ENST00000446425 GM2AP17900 193 aa18.15■□□□□ 0.5
UBXN2A-203ENST00000446425 TAC1P20366 129 aa18.15■□□□□ 0.5
UBXN2A-203ENST00000446425 ABCB4P21439 1286 aa18.15■□□□□ 0.5
UBXN2A-203ENST00000446425 YARSP54577 528 aaKnown RBP18.15■□□□□ 0.5
UBXN2A-203ENST00000446425 HADHBP55084 474 aaKnown RBP18.15■□□□□ 0.5
UBXN2A-203ENST00000446425 STRN3Q13033 797 aa18.15■□□□□ 0.5
UBXN2A-203ENST00000446425 LAMB3Q13751 1172 aa18.15■□□□□ 0.5
UBXN2A-203ENST00000446425 DCAF17Q5H9S7 520 aaPredicted RBP18.15■□□□□ 0.5
UBXN2A-203ENST00000446425 ZNF713Q8N859 430 aaPredicted RBP18.15■□□□□ 0.5
UBXN2A-203ENST00000446425 FBXO41Q8TF61 875 aa18.15■□□□□ 0.5
UBXN2A-203ENST00000446425 FAM136AQ96C01 138 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms