RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 DNAJC25-GNG10A0A024R161 153 aa17.08■□□□□ 0.32
SNX13-204ENST00000444712 GFPT2O94808 682 aa17.08■□□□□ 0.32
SNX13-204ENST00000444712 ERVK-9P63128 1117 aa17.08■□□□□ 0.32
SNX13-204ENST00000444712 BRDTQ58F21 947 aaPredicted RBP17.08■□□□□ 0.32
SNX13-204ENST00000444712 EXOC8Q8IYI6 725 aa17.08■□□□□ 0.32
SNX13-204ENST00000444712 SLC7A3Q8WY07 619 aa17.08■□□□□ 0.32
SNX13-204ENST00000444712 SEPT1Q8WYJ6 367 aa17.08■□□□□ 0.32
SNX13-204ENST00000444712 CBWD1Q9BRT8 395 aa17.08■□□□□ 0.32
SNX13-204ENST00000444712 POLR3FQ9H1D9 316 aaPredicted RBP17.08■□□□□ 0.32
SNX13-204ENST00000444712 PDCL3Q9H2J4 239 aa17.08■□□□□ 0.32
SNX13-204ENST00000444712 TXNRD2Q9NNW7 524 aa17.08■□□□□ 0.32
SNX13-204ENST00000444712 XPNPEP1Q9NQW7 623 aa17.08■□□□□ 0.32
SNX13-204ENST00000444712 PLXNA1Q9UIW2 1896 aa17.07■□□□□ 0.32
SNX13-204ENST00000444712 PLXNB2O15031 1838 aa17.07■□□□□ 0.32
SNX13-204ENST00000444712 RCCD1A6NED2 376 aa17.07■□□□□ 0.32
SNX13-204ENST00000444712 KIAA0391O15091 583 aaKnown RBP17.07■□□□□ 0.32
SNX13-204ENST00000444712 CETPP11597 493 aa17.07■□□□□ 0.32
SNX13-204ENST00000444712 GARTP22102 1010 aa17.07■□□□□ 0.32
SNX13-204ENST00000444712 GFPT1Q06210 699 aaPredicted RBP17.07■□□□□ 0.32
SNX13-204ENST00000444712 ERCC6LQ2NKX8 1250 aa17.07■□□□□ 0.32
SNX13-204ENST00000444712 STK33Q9BYT3 514 aa17.07■□□□□ 0.32
SNX13-204ENST00000444712 INTS2Q9H0H0 1204 aaKnown RBP17.07■□□□□ 0.32
SNX13-204ENST00000444712 PCIF1Q9H4Z3 704 aa17.07■□□□□ 0.32
SNX13-204ENST00000444712 DHX33Q9H6R0 707 aaKnown RBP17.07■□□□□ 0.32
SNX13-204ENST00000444712 MLXIPQ9HAP2 919 aa17.07■□□□□ 0.32
SNX13-204ENST00000444712 APEX2Q9UBZ4 518 aa17.07■□□□□ 0.32
SNX13-204ENST00000444712 ASB14A6NK59 587 aa17.06■□□□□ 0.32
SNX13-204ENST00000444712 PEX10O60683 326 aa17.06■□□□□ 0.32
SNX13-204ENST00000444712 TRIM49P0CI25 452 aa17.06■□□□□ 0.32
SNX13-204ENST00000444712 TRIM49CP0CI26 452 aa17.06■□□□□ 0.32
SNX13-204ENST00000444712 CNGA1P29973 690 aa17.06■□□□□ 0.32
SNX13-204ENST00000444712 APBA1Q02410 837 aa17.06■□□□□ 0.32
SNX13-204ENST00000444712 FSTL1Q12841 308 aa17.06■□□□□ 0.32
SNX13-204ENST00000444712 PAPD7Q5XG87 772 aaKnown RBP17.06■□□□□ 0.32
SNX13-204ENST00000444712 IRF2BP2Q7Z5L9 587 aa17.06■□□□□ 0.32
SNX13-204ENST00000444712 RDH13Q8NBN7 331 aa17.06■□□□□ 0.32
SNX13-204ENST00000444712 MORC4Q8TE76 937 aa17.06■□□□□ 0.32
SNX13-204ENST00000444712 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.06■□□□□ 0.32
SNX13-204ENST00000444712 AZI2Q9H6S1 392 aa17.06■□□□□ 0.32
SNX13-204ENST00000444712 ARGLU1Q9NWB6 273 aaPredicted RBP17.06■□□□□ 0.32
SNX13-204ENST00000444712 ARHGAP28Q9P2N2 729 aa17.06■□□□□ 0.32
SNX13-204ENST00000444712 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.06■□□□□ 0.32
SNX13-204ENST00000444712 V9GYY5 206 aaPredicted RBP17.06■□□□□ 0.32
SNX13-204ENST00000444712 GSTTP1A0A1W2PQM5 241 aa17.06■□□□□ 0.32
SNX13-204ENST00000444712 MACROD2A1Z1Q3 448 aa17.06■□□□□ 0.32
SNX13-204ENST00000444712 GGPS1O95749 300 aa17.06■□□□□ 0.32
SNX13-204ENST00000444712 NAMPTP43490 491 aa17.06■□□□□ 0.32
SNX13-204ENST00000444712 STAT5BP51692 787 aa17.06■□□□□ 0.32
SNX13-204ENST00000444712 GTF2A2P52657 109 aa17.06■□□□□ 0.32
SNX13-204ENST00000444712 CHMP4BP1P59074 171 aa17.06■□□□□ 0.32
SNX13-204ENST00000444712 AMPD2Q01433 879 aa17.06■□□□□ 0.32
SNX13-204ENST00000444712 ARID5AQ03989 594 aa17.06■□□□□ 0.32
SNX13-204ENST00000444712 NAA30Q147X3 362 aaPredicted RBP17.06■□□□□ 0.32
SNX13-204ENST00000444712 CBWD6Q4V339 395 aa17.06■□□□□ 0.32
SNX13-204ENST00000444712 CBWD3Q5JTY5 395 aa17.06■□□□□ 0.32
SNX13-204ENST00000444712 CBWD5Q5RIA9 395 aa17.06■□□□□ 0.32
SNX13-204ENST00000444712 IQCEQ6IPM2 695 aa17.06■□□□□ 0.32
SNX13-204ENST00000444712 BSNDQ8WZ55 320 aa17.06■□□□□ 0.32
SNX13-204ENST00000444712 RABGGTAQ92696 567 aa17.06■□□□□ 0.32
SNX13-204ENST00000444712 KIAA1586Q9HCI6 787 aa17.06■□□□□ 0.32
SNX13-204ENST00000444712 JRKLQ9Y4A0 524 aa17.06■□□□□ 0.32
SNX13-204ENST00000444712 SAR1BQ9Y6B6 198 aa17.06■□□□□ 0.32
SNX13-204ENST00000444712 EMSYQ7Z589 1322 aa17.06■□□□□ 0.32
SNX13-204ENST00000444712 GAS2O43903 313 aaKnown RBP17.05■□□□□ 0.32
SNX13-204ENST00000444712 SORBS3O60504 671 aa17.05■□□□□ 0.32
SNX13-204ENST00000444712 GJA5P36382 358 aa17.05■□□□□ 0.32
SNX13-204ENST00000444712 STRN3Q13033 797 aa17.05■□□□□ 0.32
SNX13-204ENST00000444712 Q3C1V9 767 aa17.05■□□□□ 0.32
SNX13-204ENST00000444712 RSRC2Q7L4I2 434 aaKnown RBP17.05■□□□□ 0.32
SNX13-204ENST00000444712 TRAPPC11Q7Z392 1133 aa17.05■□□□□ 0.32
SNX13-204ENST00000444712 GPR161Q8N6U8 529 aaKnown RBP17.05■□□□□ 0.32
SNX13-204ENST00000444712 TMC2Q8TDI7 906 aa17.05■□□□□ 0.32
SNX13-204ENST00000444712 NOX5Q96PH1 765 aa17.05■□□□□ 0.32
SNX13-204ENST00000444712 PORCNQ9H237 461 aa17.05■□□□□ 0.32
SNX13-204ENST00000444712 DNAJC12Q9UKB3 198 aa17.05■□□□□ 0.32
SNX13-204ENST00000444712 BTNL10A8MVZ5 291 aa17.04■□□□□ 0.32
SNX13-204ENST00000444712 ATP4AP20648 1035 aa17.04■□□□□ 0.32
SNX13-204ENST00000444712 GTF2H1P32780 548 aa17.04■□□□□ 0.32
SNX13-204ENST00000444712 SOX5P35711 763 aa17.04■□□□□ 0.32
SNX13-204ENST00000444712 CKAP4Q07065 602 aaKnown RBP17.04■□□□□ 0.32
SNX13-204ENST00000444712 BMS1Q14692 1282 aaKnown RBP17.04■□□□□ 0.32
SNX13-204ENST00000444712 SNRNP35Q16560 246 aaKnown RBP17.04■□□□□ 0.32
SNX13-204ENST00000444712 BICD1Q96G01 975 aa17.04■□□□□ 0.32
SNX13-204ENST00000444712 RPGRIP1Q96KN7 1286 aa17.04■□□□□ 0.32
SNX13-204ENST00000444712 FBXL18Q96ME1 805 aa17.04■□□□□ 0.32
SNX13-204ENST00000444712 DDX41Q9UJV9 622 aaKnown RBP17.04■□□□□ 0.32
SNX13-204ENST00000444712 USP20Q9Y2K6 914 aa17.04■□□□□ 0.32
SNX13-204ENST00000444712 MCM3APO60318 1980 aa17.04■□□□□ 0.32
SNX13-204ENST00000444712 MYH10P35580 1976 aa17.04■□□□□ 0.32
SNX13-204ENST00000444712 CTAGE15A4D2H0 777 aa17.04■□□□□ 0.32
SNX13-204ENST00000444712 HNRNPDLO14979 420 aaKnown RBP17.04■□□□□ 0.32
SNX13-204ENST00000444712 CTAGE8P0CG41 777 aa17.04■□□□□ 0.32
SNX13-204ENST00000444712 TCF7P36402 384 aaPredicted RBP17.04■□□□□ 0.32
SNX13-204ENST00000444712 GCLCP48506 637 aaPredicted RBP17.04■□□□□ 0.32
SNX13-204ENST00000444712 PTK2Q05397 1052 aa17.04■□□□□ 0.32
SNX13-204ENST00000444712 WDR78Q5VTH9 848 aa17.04■□□□□ 0.32
SNX13-204ENST00000444712 CTAGE6Q86UF2 777 aa17.04■□□□□ 0.32
SNX13-204ENST00000444712 CTAGE4Q8IX94 777 aa17.04■□□□□ 0.32
SNX13-204ENST00000444712 LRRN4CLQ8ND94 238 aa17.04■□□□□ 0.32
SNX13-204ENST00000444712 GPRC5AQ8NFJ5 357 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms