RNA–Protein interactions for RNA: ENST00000444621.1

HLA-F-221, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-221ENST00000444621 M0R296 226 aa12.33□□□□□ -0.44
HLA-F-221ENST00000444621 GFRA3O60609 400 aa12.33□□□□□ -0.44
HLA-F-221ENST00000444621 EOMESO95936 686 aa12.33□□□□□ -0.44
HLA-F-221ENST00000444621 BMPR1AP36894 532 aa12.33□□□□□ -0.44
HLA-F-221ENST00000444621 CCT6AP40227 531 aaKnown RBP12.33□□□□□ -0.44
HLA-F-221ENST00000444621 PHKA2P46019 1235 aa12.33□□□□□ -0.44
HLA-F-221ENST00000444621 PCBP1Q15365 356 aaKnown RBP eCLIP12.33□□□□□ -0.44
HLA-F-221ENST00000444621 CTC1Q2NKJ3 1217 aa12.33□□□□□ -0.44
HLA-F-221ENST00000444621 KRT79Q5XKE5 535 aa12.33□□□□□ -0.44
HLA-F-221ENST00000444621 TWF2Q6IBS0 349 aaKnown RBP12.33□□□□□ -0.44
HLA-F-221ENST00000444621 SRGAP1Q7Z6B7 1085 aa12.33□□□□□ -0.44
HLA-F-221ENST00000444621 PRPF31Q8WWY3 499 aaKnown RBP12.33□□□□□ -0.44
HLA-F-221ENST00000444621 TMEM143Q96AN5 459 aa12.33□□□□□ -0.44
HLA-F-221ENST00000444621 PBXIP1Q96AQ6 731 aa12.33□□□□□ -0.44
HLA-F-221ENST00000444621 ZNF689Q96CS4 500 aaPredicted RBP12.33□□□□□ -0.44
HLA-F-221ENST00000444621 ZNF668Q96K58 619 aaPredicted RBP12.33□□□□□ -0.44
HLA-F-221ENST00000444621 PRRX2Q99811 253 aa12.33□□□□□ -0.44
HLA-F-221ENST00000444621 FDXACB1Q9BRP7 624 aaPredicted RBP12.33□□□□□ -0.44
HLA-F-221ENST00000444621 LMAN2LQ9H0V9 348 aa12.33□□□□□ -0.44
HLA-F-221ENST00000444621 TMEM60Q9H2L4 133 aa12.33□□□□□ -0.44
HLA-F-221ENST00000444621 TTC3P53804 2025 aa12.32□□□□□ -0.44
HLA-F-221ENST00000444621 ARHGEF35A5YM69 484 aa12.32□□□□□ -0.44
HLA-F-221ENST00000444621 CARNS1A5YM72 827 aa12.32□□□□□ -0.44
HLA-F-221ENST00000444621 TBKBP1A7MCY6 615 aa12.32□□□□□ -0.44
HLA-F-221ENST00000444621 C9IYK1 514 aa12.32□□□□□ -0.44
HLA-F-221ENST00000444621 NCK2O43639 380 aa12.32□□□□□ -0.44
HLA-F-221ENST00000444621 ERLIN2O94905 339 aa12.32□□□□□ -0.44
HLA-F-221ENST00000444621 RPA1P27694 616 aa12.32□□□□□ -0.44
HLA-F-221ENST00000444621 PRPHP41219 470 aa12.32□□□□□ -0.44
HLA-F-221ENST00000444621 FXR2P51116 673 aaKnown RBP eCLIP12.32□□□□□ -0.44
HLA-F-221ENST00000444621 RAB27AP51159 221 aa12.32□□□□□ -0.44
HLA-F-221ENST00000444621 FAM189BP81408 668 aa12.32□□□□□ -0.44
HLA-F-221ENST00000444621 LAMTOR4Q0VGL1 99 aa12.32□□□□□ -0.44
HLA-F-221ENST00000444621 HYAL1Q12794 435 aa12.32□□□□□ -0.44
HLA-F-221ENST00000444621 PTGDRQ13258 359 aa12.32□□□□□ -0.44
HLA-F-221ENST00000444621 PAN2Q504Q3 1202 aaKnown RBP12.32□□□□□ -0.44
HLA-F-221ENST00000444621 TRIM67Q6ZTA4 783 aa12.32□□□□□ -0.44
HLA-F-221ENST00000444621 CATSPER3Q86XQ3 398 aa12.32□□□□□ -0.44
HLA-F-221ENST00000444621 SUGP1Q8IWZ8 645 aaKnown RBP12.32□□□□□ -0.44
HLA-F-221ENST00000444621 RNF169Q8NCN4 708 aa12.32□□□□□ -0.44
HLA-F-221ENST00000444621 MCPH1Q8NEM0 835 aa12.32□□□□□ -0.44
HLA-F-221ENST00000444621 PIGOQ8TEQ8 1089 aa12.32□□□□□ -0.44
HLA-F-221ENST00000444621 LINC01599Q8WXQ3 324 aa12.32□□□□□ -0.44
HLA-F-221ENST00000444621 RSPH1Q8WYR4 309 aa12.32□□□□□ -0.44
HLA-F-221ENST00000444621 PPP2R3CQ969Q6 453 aa12.32□□□□□ -0.44
HLA-F-221ENST00000444621 PGBD4Q96DM1 585 aa12.32□□□□□ -0.44
HLA-F-221ENST00000444621 CEP89Q96ST8 783 aa12.32□□□□□ -0.44
HLA-F-221ENST00000444621 FAM86C1Q9NVL1 165 aa12.32□□□□□ -0.44
HLA-F-221ENST00000444621 DBR1Q9UK59 544 aaKnown RBP12.32□□□□□ -0.44
HLA-F-221ENST00000444621 PIN4Q9Y237 131 aaKnown RBP12.32□□□□□ -0.44
HLA-F-221ENST00000444621 COL4A6Q14031 1691 aa12.32□□□□□ -0.44
HLA-F-221ENST00000444621 BMP15O95972 392 aa12.31□□□□□ -0.44
HLA-F-221ENST00000444621 HSP90AA1P07900 732 aaKnown RBP12.31□□□□□ -0.44
HLA-F-221ENST00000444621 DRP2Q13474 957 aa12.31□□□□□ -0.44
HLA-F-221ENST00000444621 SMAD4Q13485 552 aaKnown RBP12.31□□□□□ -0.44
HLA-F-221ENST00000444621 DSC3Q14574 896 aa12.31□□□□□ -0.44
HLA-F-221ENST00000444621 BMS1Q14692 1282 aaKnown RBP12.31□□□□□ -0.44
HLA-F-221ENST00000444621 BRAPQ7Z569 592 aa12.31□□□□□ -0.44
HLA-F-221ENST00000444621 FERMT3Q86UX7 667 aa12.31□□□□□ -0.44
HLA-F-221ENST00000444621 KSR1Q8IVT5 923 aa12.31□□□□□ -0.44
HLA-F-221ENST00000444621 RNF149Q8NC42 400 aa12.31□□□□□ -0.44
HLA-F-221ENST00000444621 CLP1Q92989 425 aaKnown RBP12.31□□□□□ -0.44
HLA-F-221ENST00000444621 P2RX5Q93086 422 aa12.31□□□□□ -0.44
HLA-F-221ENST00000444621 CDK5RAP3Q96JB5 506 aa12.31□□□□□ -0.44
HLA-F-221ENST00000444621 TMEM117Q9H0C3 514 aa12.31□□□□□ -0.44
HLA-F-221ENST00000444621 BMP2KQ9NSY1 1161 aaPredicted RBP12.31□□□□□ -0.44
HLA-F-221ENST00000444621 WRAP73Q9P2S5 460 aaPredicted RBP12.31□□□□□ -0.44
HLA-F-221ENST00000444621 DNM3Q9UQ16 869 aa12.31□□□□□ -0.44
HLA-F-221ENST00000444621 PCDHB6Q9Y5E3 794 aa12.31□□□□□ -0.44
HLA-F-221ENST00000444621 PLXNA3P51805 1871 aa12.31□□□□□ -0.44
HLA-F-221ENST00000444621 A0A0U1RQF3 1178 aa12.3□□□□□ -0.44
HLA-F-221ENST00000444621 VPS37CA5D8V6 355 aaPredicted RBP12.3□□□□□ -0.44
HLA-F-221ENST00000444621 C5orf67F2Z3F1 127 aa12.3□□□□□ -0.44
HLA-F-221ENST00000444621 WNT7AO00755 349 aa12.3□□□□□ -0.44
HLA-F-221ENST00000444621 ZBTB39O15060 712 aa12.3□□□□□ -0.44
HLA-F-221ENST00000444621 GRM6O15303 877 aa12.3□□□□□ -0.44
HLA-F-221ENST00000444621 MGEA5O60502 916 aa12.3□□□□□ -0.44
HLA-F-221ENST00000444621 TBX10O75333 385 aa12.3□□□□□ -0.44
HLA-F-221ENST00000444621 CD2BP2O95400 341 aaKnown RBP12.3□□□□□ -0.44
HLA-F-221ENST00000444621 FGFR4P22455 802 aa12.3□□□□□ -0.44
HLA-F-221ENST00000444621 AXLP30530 894 aa12.3□□□□□ -0.44
HLA-F-221ENST00000444621 RARRES1P49788 294 aa12.3□□□□□ -0.44
HLA-F-221ENST00000444621 FOXK2Q01167 660 aa12.3□□□□□ -0.44
HLA-F-221ENST00000444621 POU5F1BQ06416 359 aa12.3□□□□□ -0.44
HLA-F-221ENST00000444621 TMEM132AQ24JP5 1023 aa12.3□□□□□ -0.44
HLA-F-221ENST00000444621 FAM102BQ5T8I3 360 aa12.3□□□□□ -0.44
HLA-F-221ENST00000444621 ECHDC2Q86YB7 292 aa12.3□□□□□ -0.44
HLA-F-221ENST00000444621 ZBTB8OSQ8IWT0 167 aa12.3□□□□□ -0.44
HLA-F-221ENST00000444621 HACE1Q8IYU2 909 aa12.3□□□□□ -0.44
HLA-F-221ENST00000444621 ZNF579Q8NAF0 562 aaKnown RBP12.3□□□□□ -0.44
HLA-F-221ENST00000444621 CNNM3Q8NE01 707 aa12.3□□□□□ -0.44
HLA-F-221ENST00000444621 SNX29Q8TEQ0 813 aa12.3□□□□□ -0.44
HLA-F-221ENST00000444621 MRPL9Q9BYD2 267 aaKnown RBP12.3□□□□□ -0.44
HLA-F-221ENST00000444621 DAXXQ9UER7 740 aaPredicted RBP12.3□□□□□ -0.44
HLA-F-221ENST00000444621 PUF60Q9UHX1 559 aaKnown RBP12.3□□□□□ -0.44
HLA-F-221ENST00000444621 CD207Q9UJ71 328 aa12.3□□□□□ -0.44
HLA-F-221ENST00000444621 MRPL42Q9Y6G3 142 aaKnown RBP12.3□□□□□ -0.44
HLA-F-221ENST00000444621 ARID2Q68CP9 1835 aa12.3□□□□□ -0.44
HLA-F-221ENST00000444621 INO80B-WBP1J3KQ70 363 aa12.29□□□□□ -0.44
HLA-F-221ENST00000444621 LINC01565O15544 149 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms