RNA–Protein interactions for RNA: ENST00000443711.2

USP40-206, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2 BASIC

Gene USP40, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-206ENST00000443711 PARNO95453 639 aaKnown RBP17.39■□□□□ 0.37
USP40-206ENST00000443711 DARSP14868 501 aaKnown RBP17.39■□□□□ 0.37
USP40-206ENST00000443711 EIF4BP23588 611 aaKnown RBP17.39■□□□□ 0.37
USP40-206ENST00000443711 CYP2C18P33260 490 aa17.39■□□□□ 0.37
USP40-206ENST00000443711 ALCAMQ13740 583 aa17.39■□□□□ 0.37
USP40-206ENST00000443711 CDCA2Q69YH5 1023 aaPredicted RBP17.39■□□□□ 0.37
USP40-206ENST00000443711 TRAF7Q6Q0C0 670 aa17.39■□□□□ 0.37
USP40-206ENST00000443711 STXBP4Q6ZWJ1 553 aa17.39■□□□□ 0.37
USP40-206ENST00000443711 ZNF720Q7Z2F6 126 aa17.39■□□□□ 0.37
USP40-206ENST00000443711 C7orf61Q8IZ16 206 aa17.39■□□□□ 0.37
USP40-206ENST00000443711 USP38Q8NB14 1042 aa17.39■□□□□ 0.37
USP40-206ENST00000443711 TMEM161BQ8NDZ6 487 aa17.39■□□□□ 0.37
USP40-206ENST00000443711 FIZ1Q96SL8 496 aa17.39■□□□□ 0.37
USP40-206ENST00000443711 ST6GALNAC4Q9H4F1 302 aa17.39■□□□□ 0.37
USP40-206ENST00000443711 TMEM134Q9H6X4 195 aa17.39■□□□□ 0.37
USP40-206ENST00000443711 ARHGAP28Q9P2N2 729 aa17.39■□□□□ 0.37
USP40-206ENST00000443711 PCDHB13Q9Y5F0 798 aa17.39■□□□□ 0.37
USP40-206ENST00000443711 SQORQ9Y6N5 450 aa17.39■□□□□ 0.37
USP40-206ENST00000443711 DNAH12Q6ZR08 3092 aa17.39■□□□□ 0.37
USP40-206ENST00000443711 BRCA2P51587 3418 aa17.39■□□□□ 0.37
USP40-206ENST00000443711 SIP14410 1827 aa17.38■□□□□ 0.37
USP40-206ENST00000443711 TRIM43BA6NCK2 446 aa17.38■□□□□ 0.37
USP40-206ENST00000443711 INO80B-WBP1J3KQ70 363 aa17.38■□□□□ 0.37
USP40-206ENST00000443711 LETM1O95202 739 aaPredicted RBP17.38■□□□□ 0.37
USP40-206ENST00000443711 TIMP1P01033 207 aa17.38■□□□□ 0.37
USP40-206ENST00000443711 IQCF3P0C7M6 154 aa17.38■□□□□ 0.37
USP40-206ENST00000443711 RAG1P15918 1043 aa17.38■□□□□ 0.37
USP40-206ENST00000443711 FBXO47Q5MNV8 452 aa17.38■□□□□ 0.37
USP40-206ENST00000443711 RBM43Q6ZSC3 357 aaKnown RBP17.38■□□□□ 0.37
USP40-206ENST00000443711 TRIML1Q8N9V2 468 aa17.38■□□□□ 0.37
USP40-206ENST00000443711 KCNN1Q92952 543 aa17.38■□□□□ 0.37
USP40-206ENST00000443711 HPS3Q969F9 1004 aa17.38■□□□□ 0.37
USP40-206ENST00000443711 TRIM43Q96BQ3 446 aaPredicted RBP17.38■□□□□ 0.37
USP40-206ENST00000443711 KIFC3Q9BVG8 833 aa17.38■□□□□ 0.37
USP40-206ENST00000443711 SLC39A2Q9NP94 309 aa17.38■□□□□ 0.37
USP40-206ENST00000443711 MAN1B1Q9UKM7 699 aa17.38■□□□□ 0.37
USP40-206ENST00000443711 UMODL1Q5DID0 1318 aa17.38■□□□□ 0.37
USP40-206ENST00000443711 ADGRA3Q8IWK6 1321 aa17.38■□□□□ 0.37
USP40-206ENST00000443711 DENND3A2RUS2 1198 aa17.37■□□□□ 0.37
USP40-206ENST00000443711 BIN1O00499 593 aa17.37■□□□□ 0.37
USP40-206ENST00000443711 GCNT3O95395 438 aa17.37■□□□□ 0.37
USP40-206ENST00000443711 CCL23P55773 120 aa17.37■□□□□ 0.37
USP40-206ENST00000443711 GTF2BQ00403 316 aa17.37■□□□□ 0.37
USP40-206ENST00000443711 MBTD1Q05BQ5 628 aa17.37■□□□□ 0.37
USP40-206ENST00000443711 STRN3Q13033 797 aa17.37■□□□□ 0.37
USP40-206ENST00000443711 STK4Q13043 487 aa17.37■□□□□ 0.37
USP40-206ENST00000443711 PCBP1Q15365 356 aaKnown RBP eCLIP17.37■□□□□ 0.37
USP40-206ENST00000443711 MAPK6Q16659 721 aa17.37■□□□□ 0.37
USP40-206ENST00000443711 ZNF658Q5TYW1 1059 aaPredicted RBP17.37■□□□□ 0.37
USP40-206ENST00000443711 HVCN1Q96D96 273 aa17.37■□□□□ 0.37
USP40-206ENST00000443711 FZD8Q9H461 694 aa17.37■□□□□ 0.37
USP40-206ENST00000443711 MINDY3Q9H8M7 445 aa17.37■□□□□ 0.37
USP40-206ENST00000443711 PRMT7Q9NVM4 692 aaPredicted RBP17.37■□□□□ 0.37
USP40-206ENST00000443711 TANC1Q9C0D5 1861 aa17.37■□□□□ 0.37
USP40-206ENST00000443711 GPR182O15218 404 aa17.36■□□□□ 0.37
USP40-206ENST00000443711 EIF3DO15371 548 aaKnown RBP eCLIP17.36■□□□□ 0.37
USP40-206ENST00000443711 RPS6KA5O75582 802 aa17.36■□□□□ 0.37
USP40-206ENST00000443711 MYBP10242 640 aa17.36■□□□□ 0.37
USP40-206ENST00000443711 SFPQP23246 707 aaKnown RBP eCLIP17.36■□□□□ 0.37
USP40-206ENST00000443711 RFC2P35250 354 aa17.36■□□□□ 0.37
USP40-206ENST00000443711 MORC3Q14149 939 aa17.36■□□□□ 0.37
USP40-206ENST00000443711 LPIN1Q14693 890 aa17.36■□□□□ 0.37
USP40-206ENST00000443711 FAM187BQ17R55 369 aa17.36■□□□□ 0.37
USP40-206ENST00000443711 ZC2HC1CQ53FD0 456 aaPredicted RBP17.36■□□□□ 0.37
USP40-206ENST00000443711 ISM2Q6H9L7 571 aa17.36■□□□□ 0.37
USP40-206ENST00000443711 TSHZ1Q6ZSZ6 1077 aa17.36■□□□□ 0.37
USP40-206ENST00000443711 CATSPER4Q7RTX7 472 aa17.36■□□□□ 0.37
USP40-206ENST00000443711 TMEM40Q8WWA1 233 aa17.36■□□□□ 0.37
USP40-206ENST00000443711 SCLYQ96I15 445 aa17.36■□□□□ 0.37
USP40-206ENST00000443711 STRA6Q9BX79 667 aa17.36■□□□□ 0.37
USP40-206ENST00000443711 CCDC113Q9H0I3 377 aa17.36■□□□□ 0.37
USP40-206ENST00000443711 WNT8AQ9H1J5 351 aa17.36■□□□□ 0.37
USP40-206ENST00000443711 TBX20Q9UMR3 447 aa17.36■□□□□ 0.37
USP40-206ENST00000443711 NOC2LQ9Y3T9 749 aaKnown RBP17.36■□□□□ 0.37
USP40-206ENST00000443711 SCN5AQ14524 2016 aa17.35■□□□□ 0.37
USP40-206ENST00000443711 ACKR2O00590 384 aa17.35■□□□□ 0.37
USP40-206ENST00000443711 CSDE1O75534 798 aaKnown RBP17.35■□□□□ 0.37
USP40-206ENST00000443711 PPP1R37O75864 691 aa17.35■□□□□ 0.37
USP40-206ENST00000443711 ERLIN2O94905 339 aa17.35■□□□□ 0.37
USP40-206ENST00000443711 KIF20AO95235 890 aa17.35■□□□□ 0.37
USP40-206ENST00000443711 PRKCBP05771 671 aa17.35■□□□□ 0.37
USP40-206ENST00000443711 GHRP10912 638 aa17.35■□□□□ 0.37
USP40-206ENST00000443711 CASP5P51878 434 aa17.35■□□□□ 0.37
USP40-206ENST00000443711 NCBP1Q09161 790 aaKnown RBP17.35■□□□□ 0.37
USP40-206ENST00000443711 MBTPS1Q14703 1052 aa17.35■□□□□ 0.37
USP40-206ENST00000443711 L1TD1Q5T7N2 865 aaKnown RBP17.35■□□□□ 0.37
USP40-206ENST00000443711 MFSD5Q6N075 450 aa17.35■□□□□ 0.37
USP40-206ENST00000443711 SASS6Q6UVJ0 657 aa17.35■□□□□ 0.37
USP40-206ENST00000443711 PPP4R3CPQ6ZMV5 832 aa17.35■□□□□ 0.37
USP40-206ENST00000443711 EPM2AIP1Q7L775 607 aaPredicted RBP17.35■□□□□ 0.37
USP40-206ENST00000443711 MYOCDQ8IZQ8 938 aa17.35■□□□□ 0.37
USP40-206ENST00000443711 TMEM199Q8N511 208 aa17.35■□□□□ 0.37
USP40-206ENST00000443711 KIAA0895Q8NCT3 520 aa17.35■□□□□ 0.37
USP40-206ENST00000443711 ZNF507Q8TCN5 953 aa17.35■□□□□ 0.37
USP40-206ENST00000443711 PRIMPOLQ96LW4 560 aa17.35■□□□□ 0.37
USP40-206ENST00000443711 ACCSQ96QU6 501 aa17.35■□□□□ 0.37
USP40-206ENST00000443711 FGFBP2Q9BYJ0 223 aa17.35■□□□□ 0.37
USP40-206ENST00000443711 EXOC7Q9UPT5 735 aa17.35■□□□□ 0.37
USP40-206ENST00000443711 GDAQ9Y2T3 454 aa17.35■□□□□ 0.37
USP40-206ENST00000443711 NR2E3Q9Y5X4 410 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms