RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 VAV2P52735 878 aa3.08□□□□□ -1.92
LINC00393-201ENST00000443621 POLGP54098 1239 aaPredicted RBP3.08□□□□□ -1.92
LINC00393-201ENST00000443621 ADKP55263 362 aaKnown RBP3.08□□□□□ -1.92
LINC00393-201ENST00000443621 PRMT2P55345 433 aa3.08□□□□□ -1.92
LINC00393-201ENST00000443621 STX17P56962 302 aa3.08□□□□□ -1.92
LINC00393-201ENST00000443621 JAM2P57087 298 aa3.08□□□□□ -1.92
LINC00393-201ENST00000443621 SNAP25P60880 206 aa3.08□□□□□ -1.92
LINC00393-201ENST00000443621 PRKCEQ02156 737 aa3.08□□□□□ -1.92
LINC00393-201ENST00000443621 CYP4A11Q02928 519 aa3.08□□□□□ -1.92
LINC00393-201ENST00000443621 KIF5AQ12840 1032 aa3.08□□□□□ -1.92
LINC00393-201ENST00000443621 FSTL1Q12841 308 aa3.08□□□□□ -1.92
LINC00393-201ENST00000443621 LRMPQ12912 555 aa3.08□□□□□ -1.92
LINC00393-201ENST00000443621 STRN3Q13033 797 aa3.08□□□□□ -1.92
LINC00393-201ENST00000443621 TTLL12Q14166 644 aaPredicted RBP3.08□□□□□ -1.92
LINC00393-201ENST00000443621 CTTNQ14247 550 aaKnown RBP3.08□□□□□ -1.92
LINC00393-201ENST00000443621 PLS1Q14651 629 aa3.08□□□□□ -1.92
LINC00393-201ENST00000443621 ARHGEF6Q15052 776 aa3.08□□□□□ -1.92
LINC00393-201ENST00000443621 PPP2R5EQ16537 467 aa3.08□□□□□ -1.92
LINC00393-201ENST00000443621 SLC18A3Q16572 532 aa3.08□□□□□ -1.92
LINC00393-201ENST00000443621 CCL15Q16663 113 aa3.08□□□□□ -1.92
LINC00393-201ENST00000443621 ARHGAP29Q52LW3 1261 aa3.08□□□□□ -1.92
LINC00393-201ENST00000443621 DNTTIP2Q5QJE6 756 aaKnown RBP3.08□□□□□ -1.92
LINC00393-201ENST00000443621 MORN1Q5T089 497 aa3.08□□□□□ -1.92
LINC00393-201ENST00000443621 KLHDC7AQ5VTJ3 777 aa3.08□□□□□ -1.92
LINC00393-201ENST00000443621 SFMBT2Q5VUG0 894 aa3.08□□□□□ -1.92
LINC00393-201ENST00000443621 CEP135Q66GS9 1140 aa3.08□□□□□ -1.92
LINC00393-201ENST00000443621 HGSNATQ68CP4 663 aa3.08□□□□□ -1.92
LINC00393-201ENST00000443621 KRT39Q6A163 491 aa3.08□□□□□ -1.92
LINC00393-201ENST00000443621 IQCEQ6IPM2 695 aa3.08□□□□□ -1.92
LINC00393-201ENST00000443621 SWSAP1Q6NVH7 229 aa3.08□□□□□ -1.92
LINC00393-201ENST00000443621 DPY19L2P1Q6NXN4 242 aa3.08□□□□□ -1.92
LINC00393-201ENST00000443621 TAPT1Q6NXT6 567 aa3.08□□□□□ -1.92
LINC00393-201ENST00000443621 TRIM65Q6PJ69 517 aa3.08□□□□□ -1.92
LINC00393-201ENST00000443621 WDR59Q6PJI9 974 aa3.08□□□□□ -1.92
LINC00393-201ENST00000443621 C17orf99Q6UX52 265 aa3.08□□□□□ -1.92
LINC00393-201ENST00000443621 GADL1Q6ZQY3 521 aa3.08□□□□□ -1.92
LINC00393-201ENST00000443621 C15orf39Q6ZRI6 1047 aa3.08□□□□□ -1.92
LINC00393-201ENST00000443621 ZNF572Q7Z3I7 529 aaPredicted RBP3.08□□□□□ -1.92
LINC00393-201ENST00000443621 PLEKHH3Q7Z736 793 aa3.08□□□□□ -1.92
LINC00393-201ENST00000443621 RPAINQ86UA6 219 aa3.08□□□□□ -1.92
LINC00393-201ENST00000443621 SAPCD2Q86UD0 394 aa3.08□□□□□ -1.92
LINC00393-201ENST00000443621 NCAPG2Q86XI2 1143 aa3.08□□□□□ -1.92
LINC00393-201ENST00000443621 CCDC60Q8IWA6 550 aaPredicted RBP3.08□□□□□ -1.92
LINC00393-201ENST00000443621 ZBTB8OSQ8IWT0 167 aa3.08□□□□□ -1.92
LINC00393-201ENST00000443621 FAM186BQ8IYM0 893 aa3.08□□□□□ -1.92
LINC00393-201ENST00000443621 SYCP3Q8IZU3 236 aa3.08□□□□□ -1.92
LINC00393-201ENST00000443621 GPD1LQ8N335 351 aa3.08□□□□□ -1.92
LINC00393-201ENST00000443621 NME8Q8N427 588 aa3.08□□□□□ -1.92
LINC00393-201ENST00000443621 CEP112Q8N8E3 955 aa3.08□□□□□ -1.92
LINC00393-201ENST00000443621 EIF1ADQ8N9N8 165 aaKnown RBP3.08□□□□□ -1.92
LINC00393-201ENST00000443621 BANK1Q8NDB2 785 aa3.08□□□□□ -1.92
LINC00393-201ENST00000443621 MNS1Q8NEH6 495 aa3.08□□□□□ -1.92
LINC00393-201ENST00000443621 IL31RAQ8NI17 732 aa3.08□□□□□ -1.92
LINC00393-201ENST00000443621 PARD3BQ8TEW8 1205 aa3.08□□□□□ -1.92
LINC00393-201ENST00000443621 LMBR1Q8WVP7 490 aa3.08□□□□□ -1.92
LINC00393-201ENST00000443621 PSPC1Q8WXF1 523 aaKnown RBP3.08□□□□□ -1.92
LINC00393-201ENST00000443621 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.08□□□□□ -1.921e-10■■■□□ 16.5
LINC00393-201ENST00000443621 BAP1Q92560 729 aa3.08□□□□□ -1.92
LINC00393-201ENST00000443621 USP6NLQ92738 828 aa3.08□□□□□ -1.92
LINC00393-201ENST00000443621 VCPIP1Q96JH7 1222 aa3.08□□□□□ -1.92
LINC00393-201ENST00000443621 PPP1R13BQ96KQ4 1090 aa3.08□□□□□ -1.92
LINC00393-201ENST00000443621 CCDC42Q96M95 316 aa3.08□□□□□ -1.92
LINC00393-201ENST00000443621 FGD4Q96M96 766 aa3.08□□□□□ -1.92
LINC00393-201ENST00000443621 PURBQ96QR8 312 aaKnown RBP3.08□□□□□ -1.92
LINC00393-201ENST00000443621 GPR20Q99678 358 aa3.08□□□□□ -1.92
LINC00393-201ENST00000443621 TINF2Q9BSI4 451 aa3.08□□□□□ -1.92
LINC00393-201ENST00000443621 KATNAL1Q9BW62 490 aa3.08□□□□□ -1.92
LINC00393-201ENST00000443621 DNAI2Q9GZS0 605 aa3.08□□□□□ -1.92
LINC00393-201ENST00000443621 KATNBL1Q9H079 304 aa3.08□□□□□ -1.92
LINC00393-201ENST00000443621 ASB7Q9H672 318 aa3.08□□□□□ -1.92
LINC00393-201ENST00000443621 VRTNQ9H8Y1 702 aa3.08□□□□□ -1.92
LINC00393-201ENST00000443621 NHEJ1Q9H9Q4 299 aaPredicted RBP3.08□□□□□ -1.92
LINC00393-201ENST00000443621 TMEM8AQ9HCN3 771 aa3.08□□□□□ -1.92
LINC00393-201ENST00000443621 KMT5AQ9NQR1 393 aa3.08□□□□□ -1.92
LINC00393-201ENST00000443621 HOMER2Q9NSB8 354 aa3.08□□□□□ -1.92
LINC00393-201ENST00000443621 PRMT7Q9NVM4 692 aaPredicted RBP3.08□□□□□ -1.92
LINC00393-201ENST00000443621 TMEM51Q9NW97 253 aa3.08□□□□□ -1.92
LINC00393-201ENST00000443621 TAB2Q9NYJ8 693 aa3.08□□□□□ -1.92
LINC00393-201ENST00000443621 WRAP73Q9P2S5 460 aaPredicted RBP3.08□□□□□ -1.92
LINC00393-201ENST00000443621 GABBR1Q9UBS5 961 aa3.08□□□□□ -1.92
LINC00393-201ENST00000443621 APEX2Q9UBZ4 518 aa3.08□□□□□ -1.92
LINC00393-201ENST00000443621 DNAI1Q9UI46 699 aa3.08□□□□□ -1.92
LINC00393-201ENST00000443621 ZNF215Q9UL58 517 aaPredicted RBP3.08□□□□□ -1.92
LINC00393-201ENST00000443621 PYCARDQ9ULZ3 195 aa3.08□□□□□ -1.92
LINC00393-201ENST00000443621 CNTN6Q9UQ52 1028 aa3.08□□□□□ -1.92
LINC00393-201ENST00000443621 MAPK8IP1Q9UQF2 711 aa3.08□□□□□ -1.92
LINC00393-201ENST00000443621 DERAQ9Y315 318 aa3.08□□□□□ -1.92
LINC00393-201ENST00000443621 TLL2Q9Y6L7 1015 aa3.08□□□□□ -1.92
LINC00393-201ENST00000443621 SQORQ9Y6N5 450 aa3.08□□□□□ -1.92
LINC00393-201ENST00000443621 NRCAMQ92823 1304 aa3.08□□□□□ -1.92
LINC00393-201ENST00000443621 PASKQ96RG2 1323 aa3.08□□□□□ -1.92
LINC00393-201ENST00000443621 A0A0B4J269 797 aa3.07□□□□□ -1.92
LINC00393-201ENST00000443621 SMIM35A0A1B0GVV1 85 aa3.07□□□□□ -1.92
LINC00393-201ENST00000443621 DENND3A2RUS2 1198 aa3.07□□□□□ -1.92
LINC00393-201ENST00000443621 CTAGE9A4FU28 777 aa3.07□□□□□ -1.92
LINC00393-201ENST00000443621 ANKRD62A6NC57 917 aa3.07□□□□□ -1.92
LINC00393-201ENST00000443621 RASSF10A6NK89 507 aa3.07□□□□□ -1.92
LINC00393-201ENST00000443621 H3BRB1 525 aa3.07□□□□□ -1.92
LINC00393-201ENST00000443621 K7ENM7 598 aa3.07□□□□□ -1.92
LINC00393-201ENST00000443621 HAS3O00219 553 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms