RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 CLMNQ96JQ2 1002 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 NDUFA13Q9P0J0 144 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 PCDHA6Q9UN73 950 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 PCDHA8Q9Y5H6 950 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 MROH5Q6ZUA9 1318 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 A0A1B0GVG6 124 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 HNRNPRO43390 633 aaKnown RBP5.37□□□□□ -1.55
HERC1-201ENST00000443617 EXOC3O60645 756 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 GGPS1O95749 300 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 TTC4O95801 387 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 PENKP01210 267 aaPredicted RBP5.37□□□□□ -1.55
HERC1-201ENST00000443617 COASYQ13057 564 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 PPP1R14CQ8TAE6 165 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 RFFLQ8WZ73 363 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 NEUROG2Q9H2A3 272 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 DNAJC17Q9NVM6 304 aaKnown RBP5.37□□□□□ -1.55
HERC1-201ENST00000443617 POLGP54098 1239 aaPredicted RBP5.37□□□□□ -1.55
HERC1-201ENST00000443617 FAM47AQ5JRC9 791 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 OR52E8Q6IFG1 317 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 SYDE1Q6ZW31 735 aaPredicted RBP5.37□□□□□ -1.55
HERC1-201ENST00000443617 NKX2-3Q8TAU0 364 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 DEPDC5O75140 1603 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 KRT36O76013 467 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 TAC1P20366 129 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 TNNI2P48788 182 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 KCNH2Q12809 1159 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 KHDC1Q4VXA5 237 aaKnown RBP5.37□□□□□ -1.55
HERC1-201ENST00000443617 HGSNATQ68CP4 663 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 STKLD1Q8NE28 680 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 BTBD7Q9P203 1132 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 MLH3Q9UHC1 1453 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 WNT7AO00755 349 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 TPBGLP0DKB5 382 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 VPS41P49754 854 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 ZCWPW2Q504Y3 356 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 KIAA0895Q8NCT3 520 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 METTL5Q9NRN9 209 aaKnown RBP5.37□□□□□ -1.55
HERC1-201ENST00000443617 R3HDM2Q9Y2K5 976 aaKnown RBP5.37□□□□□ -1.55
HERC1-201ENST00000443617 PHF2O75151 1096 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 PCP11498 1178 aaKnown RBP5.37□□□□□ -1.55
HERC1-201ENST00000443617 SOX5P35711 763 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 NEK8Q86SG6 692 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 SNX29Q8TEQ0 813 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 TXLNGYQ9BZA5 131 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 NAALADL1Q9UQQ1 740 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 CNTRLQ7Z7A1 2325 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 PCDH11XQ9BZA7 1347 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 EXOC1LA0A1B0GW35 172 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 USP17L12C9JPN9 530 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 USP17L21D6R901 530 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 CCNFP41002 786 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 CASP7P55210 303 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 SGO2Q562F6 1265 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 MARK2Q7KZI7 788 aaKnown RBP5.37□□□□□ -1.55
HERC1-201ENST00000443617 FRMD5Q7Z6J6 570 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 GSDMBQ8TAX9 411 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 ZNF333Q96JL9 665 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 TYW1Q9NV66 732 aaKnown RBP5.37□□□□□ -1.55
HERC1-201ENST00000443617 HAUS5O94927 633 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 GCP02774 474 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 SERPINB6P35237 376 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 CC2D2BQ6DHV5 1058 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 STK33Q9BYT3 514 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 KANSL2Q9H9L4 492 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 NPHS2Q9NP85 383 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 UBN1Q9NPG3 1134 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 SAR1AQ9NR31 198 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 SMG5Q9UPR3 1016 aaKnown RBP5.37□□□□□ -1.55
HERC1-201ENST00000443617 MIF4GDA9UHW6 222 aaKnown RBP5.37□□□□□ -1.55
HERC1-201ENST00000443617 CEP70Q8NHQ1 597 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 STX18Q9P2W9 335 aaKnown RBP5.37□□□□□ -1.55
HERC1-201ENST00000443617 BLOC1S6Q9UL45 172 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 UCHL3P15374 230 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 AP2B1P63010 937 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 THOC5Q13769 683 aaKnown RBP5.37□□□□□ -1.55
HERC1-201ENST00000443617 LRRC74BQ6ZQY2 392 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 SYT2Q8N9I0 419 aaPredicted RBP5.37□□□□□ -1.55
HERC1-201ENST00000443617 C1orf54Q8WWF1 131 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 PLA2G12BQ9BX93 195 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 ARPP21Q9UBL0 812 aaPredicted RBP5.37□□□□□ -1.55
HERC1-201ENST00000443617 TXNDC9O14530 226 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 FOXN2P32314 431 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 CTSWP56202 376 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 NCAPG2Q86XI2 1143 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 ECHDC2Q86YB7 292 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 MAML1Q92585 1016 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 ALG13Q9NP73 1137 aaKnown RBP5.37□□□□□ -1.55
HERC1-201ENST00000443617 CIDEBQ9UHD4 219 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 CPS1P31327 1500 aa5.36□□□□□ -1.55
HERC1-201ENST00000443617 TLR2O60603 784 aa5.36□□□□□ -1.55
HERC1-201ENST00000443617 NOL4O94818 638 aa5.36□□□□□ -1.55
HERC1-201ENST00000443617 OLFML2BQ68BL8 750 aa5.36□□□□□ -1.55
HERC1-201ENST00000443617 GRAMD4Q6IC98 578 aa5.36□□□□□ -1.55
HERC1-201ENST00000443617 NAGPAQ9UK23 515 aa5.36□□□□□ -1.55
HERC1-201ENST00000443617 RIPK2O43353 540 aa5.36□□□□□ -1.55
HERC1-201ENST00000443617 FTLP02792 175 aaPredicted RBP5.36□□□□□ -1.55
HERC1-201ENST00000443617 ITIH2P19823 946 aa5.36□□□□□ -1.55
HERC1-201ENST00000443617 ECHS1P30084 290 aa5.36□□□□□ -1.55
HERC1-201ENST00000443617 COILP38432 576 aaPredicted RBP5.36□□□□□ -1.55
HERC1-201ENST00000443617 MESDQ14696 234 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms