RNA–Protein interactions for RNA: ENST00000442971.1

SSXP3-201, Transcript of SSX family pseudogene 3, humanhuman

BASIC

Gene SSXP3, Length 1,300 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP3-201ENST00000442971 SPATA33Q96N06 139 aa8.5□□□□□ -1.05
SSXP3-201ENST00000442971 CASD1Q96PB1 797 aa8.5□□□□□ -1.05
SSXP3-201ENST00000442971 RIOK1Q9BRS2 568 aaKnown RBP8.5□□□□□ -1.05
SSXP3-201ENST00000442971 MKNK2Q9HBH9 465 aa8.5□□□□□ -1.05
SSXP3-201ENST00000442971 CLIP2Q9UDT6 1046 aa8.5□□□□□ -1.05
SSXP3-201ENST00000442971 SEPT9Q9UHD8 586 aaPredicted RBP8.5□□□□□ -1.05
SSXP3-201ENST00000442971 DPP7Q9UHL4 492 aa8.5□□□□□ -1.05
SSXP3-201ENST00000442971 APOBEC2Q9Y235 224 aaKnown RBP8.5□□□□□ -1.05
SSXP3-201ENST00000442971 GREB1LQ9C091 1923 aaPredicted RBP8.49□□□□□ -1.05
SSXP3-201ENST00000442971 BLACEA4D250 179 aa8.49□□□□□ -1.05
SSXP3-201ENST00000442971 CLEC18AA5D8T8 446 aa8.49□□□□□ -1.05
SSXP3-201ENST00000442971 MGEA5O60502 916 aa8.49□□□□□ -1.05
SSXP3-201ENST00000442971 ZMYND10O75800 440 aa8.49□□□□□ -1.05
SSXP3-201ENST00000442971 PAPLNO95428 1278 aa8.49□□□□□ -1.05
SSXP3-201ENST00000442971 ICAM1P05362 532 aa8.49□□□□□ -1.05
SSXP3-201ENST00000442971 RPS6P62753 249 aaKnown RBP8.49□□□□□ -1.05
SSXP3-201ENST00000442971 LRRC32Q14392 662 aa8.49□□□□□ -1.05
SSXP3-201ENST00000442971 PKDCCQ504Y2 493 aa8.49□□□□□ -1.05
SSXP3-201ENST00000442971 MYSM1Q5VVJ2 828 aa8.49□□□□□ -1.05
SSXP3-201ENST00000442971 CLEC18BQ6UXF7 455 aa8.49□□□□□ -1.05
SSXP3-201ENST00000442971 ATG14Q6ZNE5 492 aa8.49□□□□□ -1.05
SSXP3-201ENST00000442971 C16orf86Q6ZW13 317 aa8.49□□□□□ -1.05
SSXP3-201ENST00000442971 SLC24A5Q71RS6 500 aa8.49□□□□□ -1.05
SSXP3-201ENST00000442971 DDX53Q86TM3 631 aaKnown RBP8.49□□□□□ -1.05
SSXP3-201ENST00000442971 MARCH9Q86YJ5 346 aa8.49□□□□□ -1.05
SSXP3-201ENST00000442971 CMTR1Q8N1G2 835 aaKnown RBP8.49□□□□□ -1.05
SSXP3-201ENST00000442971 HDDC3Q8N4P3 179 aa8.49□□□□□ -1.05
SSXP3-201ENST00000442971 CLEC18CQ8NCF0 446 aa8.49□□□□□ -1.05
SSXP3-201ENST00000442971 STAG1Q8WVM7 1258 aa8.49□□□□□ -1.05
SSXP3-201ENST00000442971 DNAJB3Q8WWF6 145 aa8.49□□□□□ -1.05
SSXP3-201ENST00000442971 KIF2CQ99661 725 aa8.49□□□□□ -1.05
SSXP3-201ENST00000442971 CRNKL1Q9BZJ0 848 aaKnown RBP8.49□□□□□ -1.05
SSXP3-201ENST00000442971 NT5C3AQ9H0P0 336 aa8.49□□□□□ -1.05
SSXP3-201ENST00000442971 LRRC4CQ9HCJ2 640 aa8.49□□□□□ -1.05
SSXP3-201ENST00000442971 DCP1AQ9NPI6 582 aaPredicted RBP8.49□□□□□ -1.05
SSXP3-201ENST00000442971 C1orf112Q9NSG2 853 aa8.49□□□□□ -1.05
SSXP3-201ENST00000442971 RBM12Q9NTZ6 932 aaKnown RBP8.49□□□□□ -1.05
SSXP3-201ENST00000442971 TMEM161AQ9NX61 479 aa8.49□□□□□ -1.05
SSXP3-201ENST00000442971 NID2Q14112 1375 aa8.49□□□□□ -1.05
SSXP3-201ENST00000442971 MTORP42345 2549 aa8.48□□□□□ -1.05
SSXP3-201ENST00000442971 C9IYK1 514 aa8.48□□□□□ -1.05
SSXP3-201ENST00000442971 TLX3O43711 291 aaPredicted RBP8.48□□□□□ -1.05
SSXP3-201ENST00000442971 SORBS3O60504 671 aa8.48□□□□□ -1.05
SSXP3-201ENST00000442971 IDH1O75874 414 aaKnown RBP8.48□□□□□ -1.05
SSXP3-201ENST00000442971 LGALS2P05162 132 aa8.48□□□□□ -1.05
SSXP3-201ENST00000442971 MRPS6P82932 125 aaKnown RBP8.48□□□□□ -1.05
SSXP3-201ENST00000442971 C6orf132Q5T0Z8 1188 aa8.48□□□□□ -1.05
SSXP3-201ENST00000442971 TMC8Q8IU68 726 aa8.48□□□□□ -1.05
SSXP3-201ENST00000442971 SDR42E1Q8WUS8 393 aa8.48□□□□□ -1.05
SSXP3-201ENST00000442971 FGF13Q92913 245 aa8.48□□□□□ -1.05
SSXP3-201ENST00000442971 ADAM2Q99965 735 aa8.48□□□□□ -1.05
SSXP3-201ENST00000442971 USP44Q9H0E7 712 aa8.48□□□□□ -1.05
SSXP3-201ENST00000442971 RGS18Q9NS28 235 aa8.48□□□□□ -1.05
SSXP3-201ENST00000442971 EVLQ9UI08 416 aaPredicted RBP8.48□□□□□ -1.05
SSXP3-201ENST00000442971 PCDHB9Q9Y5E1 797 aa8.48□□□□□ -1.05
SSXP3-201ENST00000442971 MRVI1Q9Y6F6 885 aa8.48□□□□□ -1.05
SSXP3-201ENST00000442971 ABCA7Q8IZY2 2146 aa8.48□□□□□ -1.05
SSXP3-201ENST00000442971 DENND3A2RUS2 1198 aa8.47□□□□□ -1.05
SSXP3-201ENST00000442971 DCLK1O15075 740 aa8.47□□□□□ -1.05
SSXP3-201ENST00000442971 ENGP17813 658 aa8.47□□□□□ -1.05
SSXP3-201ENST00000442971 ZAP70P43403 619 aa8.47□□□□□ -1.05
SSXP3-201ENST00000442971 BCAR1P56945 870 aa8.47□□□□□ -1.05
SSXP3-201ENST00000442971 NFATC3Q12968 1075 aa8.47□□□□□ -1.05
SSXP3-201ENST00000442971 TRIM61Q5EBN2 209 aa8.47□□□□□ -1.05
SSXP3-201ENST00000442971 SLFN13Q68D06 897 aa8.47□□□□□ -1.05
SSXP3-201ENST00000442971 SLCO6A1Q86UG4 719 aa8.47□□□□□ -1.05
SSXP3-201ENST00000442971 TMEM173Q86WV6 379 aaPredicted RBP8.47□□□□□ -1.05
SSXP3-201ENST00000442971 GMCL1P1Q8NEA9 526 aa8.47□□□□□ -1.05
SSXP3-201ENST00000442971 CAMK1GQ96NX5 476 aa8.47□□□□□ -1.05
SSXP3-201ENST00000442971 NUSAP1Q9BXS6 441 aaKnown RBP8.47□□□□□ -1.05
SSXP3-201ENST00000442971 PLA2G2FQ9BZM2 168 aa8.47□□□□□ -1.05
SSXP3-201ENST00000442971 CDHR5Q9HBB8 845 aa8.47□□□□□ -1.05
SSXP3-201ENST00000442971 COPRSQ9NQ92 184 aa8.47□□□□□ -1.05
SSXP3-201ENST00000442971 MBD1Q9UIS9 605 aaPredicted RBP8.47□□□□□ -1.05
SSXP3-201ENST00000442971 PIAS3Q9Y6X2 628 aa8.47□□□□□ -1.05
SSXP3-201ENST00000442971 IGSF9BQ9UPX0 1349 aa8.46□□□□□ -1.05
SSXP3-201ENST00000442971 CELSR2Q9HCU4 2923 aa8.46□□□□□ -1.06
SSXP3-201ENST00000442971 ADGRG4Q8IZF6 3080 aa8.46□□□□□ -1.06
SSXP3-201ENST00000442971 CYP2D7A0A087X1C5 515 aa8.46□□□□□ -1.06
SSXP3-201ENST00000442971 MAGEB6P1A0A0J9YX57 407 aa8.46□□□□□ -1.06
SSXP3-201ENST00000442971 HOXA2O43364 376 aa8.46□□□□□ -1.06
SSXP3-201ENST00000442971 EXTL3O43909 919 aa8.46□□□□□ -1.06
SSXP3-201ENST00000442971 ECI2O75521 394 aa8.46□□□□□ -1.06
SSXP3-201ENST00000442971 C8AP07357 584 aa8.46□□□□□ -1.06
SSXP3-201ENST00000442971 CCNE1P24864 410 aa8.46□□□□□ -1.06
SSXP3-201ENST00000442971 PI4KAP42356 2102 aa8.46□□□□□ -1.06
SSXP3-201ENST00000442971 TLE3Q04726 772 aa8.46□□□□□ -1.06
SSXP3-201ENST00000442971 NFX1Q12986 1120 aaKnown RBP8.46□□□□□ -1.06
SSXP3-201ENST00000442971 STXBP2Q15833 593 aa8.46□□□□□ -1.06
SSXP3-201ENST00000442971 TMEM266Q2M3C6 531 aa8.46□□□□□ -1.06
SSXP3-201ENST00000442971 CELF3Q5SZQ8 465 aaKnown RBP8.46□□□□□ -1.06
SSXP3-201ENST00000442971 IER5Q5VY09 327 aa8.46□□□□□ -1.06
SSXP3-201ENST00000442971 CYP2U1Q7Z449 544 aa8.46□□□□□ -1.06
SSXP3-201ENST00000442971 ZNF280BQ86YH2 543 aa8.46□□□□□ -1.06
SSXP3-201ENST00000442971 ABI1Q8IZP0 508 aa8.46□□□□□ -1.06
SSXP3-201ENST00000442971 CLEC4DQ8WXI8 215 aa8.46□□□□□ -1.06
SSXP3-201ENST00000442971 BAP1Q92560 729 aa8.46□□□□□ -1.06
SSXP3-201ENST00000442971 TTC9Q92623 222 aa8.46□□□□□ -1.06
SSXP3-201ENST00000442971 MKL1Q969V6 931 aa8.46□□□□□ -1.06
SSXP3-201ENST00000442971 PRKD2Q9BZL6 878 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms