RNA–Protein interactions for RNA: ENST00000442625.2

MCF2L-218, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-218ENST00000442625 ANKRD63C9JTQ0 380 aa15.25■□□□□ 0.03
MCF2L-218ENST00000442625 GBP2P32456 591 aaPredicted RBP15.25■□□□□ 0.03
MCF2L-218ENST00000442625 KLRC3Q07444 240 aa15.25■□□□□ 0.03
MCF2L-218ENST00000442625 TCP10Q12799 353 aa15.25■□□□□ 0.03
MCF2L-218ENST00000442625 ZDHHC24Q6UX98 284 aa15.25■□□□□ 0.03
MCF2L-218ENST00000442625 ZDHHC14Q8IZN3 488 aa15.25■□□□□ 0.03
MCF2L-218ENST00000442625 EIF1ADQ8N9N8 165 aaKnown RBP15.25■□□□□ 0.03
MCF2L-218ENST00000442625 ETNPPLQ8TBG4 499 aa15.25■□□□□ 0.03
MCF2L-218ENST00000442625 TBC1D22AQ8WUA7 517 aa15.25■□□□□ 0.03
MCF2L-218ENST00000442625 KRT35Q92764 455 aa15.25■□□□□ 0.03
MCF2L-218ENST00000442625 C8orf37Q96NL8 207 aa15.25■□□□□ 0.03
MCF2L-218ENST00000442625 ERP44Q9BS26 406 aa15.25■□□□□ 0.03
MCF2L-218ENST00000442625 HOXA7P31268 230 aaPredicted RBP15.25■□□□□ 0.03
MCF2L-218ENST00000442625 HOXA13P31271 388 aaPredicted RBP15.25■□□□□ 0.03
MCF2L-218ENST00000442625 JAM2P57087 298 aa15.25■□□□□ 0.03
MCF2L-218ENST00000442625 ZC2HC1CQ53FD0 456 aaPredicted RBP15.25■□□□□ 0.03
MCF2L-218ENST00000442625 C10orf76Q5T2E6 689 aa15.25■□□□□ 0.03
MCF2L-218ENST00000442625 DENND2CQ68D51 928 aa15.25■□□□□ 0.03
MCF2L-218ENST00000442625 DUPD1Q68J44 220 aa15.25■□□□□ 0.03
MCF2L-218ENST00000442625 TAX1BP1Q86VP1 789 aa15.25■□□□□ 0.03
MCF2L-218ENST00000442625 JAMLQ86YT9 394 aa15.25■□□□□ 0.03
MCF2L-218ENST00000442625 CCDC63Q8NA47 563 aa15.25■□□□□ 0.03
MCF2L-218ENST00000442625 PIGOQ8TEQ8 1089 aa15.25■□□□□ 0.03
MCF2L-218ENST00000442625 SEC14L1Q92503 715 aa15.25■□□□□ 0.03
MCF2L-218ENST00000442625 INTS9Q9NV88 658 aaKnown RBP15.25■□□□□ 0.03
MCF2L-218ENST00000442625 NENFQ9UMX5 172 aa15.25■□□□□ 0.03
MCF2L-218ENST00000442625 BZW2Q9Y6E2 419 aaKnown RBP15.25■□□□□ 0.03
MCF2L-218ENST00000442625 RPTORQ8N122 1335 aa15.24■□□□□ 0.03
MCF2L-218ENST00000442625 PITPNM2Q9BZ72 1349 aa15.24■□□□□ 0.03
MCF2L-218ENST00000442625 TCRBV7S2A1N4TA0A589 114 aa15.24■□□□□ 0.03
MCF2L-218ENST00000442625 ZBTB39O15060 712 aa15.24■□□□□ 0.03
MCF2L-218ENST00000442625 RGS16O15492 202 aaPredicted RBP15.24■□□□□ 0.03
MCF2L-218ENST00000442625 CALUO43852 315 aaPredicted RBP15.24■□□□□ 0.03
MCF2L-218ENST00000442625 TRIM49P0CI25 452 aa15.24■□□□□ 0.03
MCF2L-218ENST00000442625 TRIM49CP0CI26 452 aa15.24■□□□□ 0.03
MCF2L-218ENST00000442625 ADCY1Q08828 1119 aa15.24■□□□□ 0.03
MCF2L-218ENST00000442625 DOK7Q18PE1 504 aa15.24■□□□□ 0.03
MCF2L-218ENST00000442625 EPM2AIP1Q7L775 607 aaPredicted RBP15.24■□□□□ 0.03
MCF2L-218ENST00000442625 PIAS4Q8N2W9 510 aaPredicted RBP15.24■□□□□ 0.03
MCF2L-218ENST00000442625 SYT2Q8N9I0 419 aaPredicted RBP15.24■□□□□ 0.03
MCF2L-218ENST00000442625 RDH13Q8NBN7 331 aa15.24■□□□□ 0.03
MCF2L-218ENST00000442625 POP1Q99575 1024 aaKnown RBP15.24■□□□□ 0.03
MCF2L-218ENST00000442625 DNAJC17Q9NVM6 304 aaKnown RBP15.24■□□□□ 0.03
MCF2L-218ENST00000442625 PCDHAC2Q9Y5I4 1007 aa15.24■□□□□ 0.03
MCF2L-218ENST00000442625 DNAJC8O75937 253 aaPredicted RBP15.24■□□□□ 0.03
MCF2L-218ENST00000442625 EEF2P13639 858 aaKnown RBP15.24■□□□□ 0.03
MCF2L-218ENST00000442625 PRKCIP41743 596 aa15.24■□□□□ 0.03
MCF2L-218ENST00000442625 RPL21P46778 160 aaKnown RBP15.24■□□□□ 0.03
MCF2L-218ENST00000442625 KCNJ1P48048 391 aa15.24■□□□□ 0.03
MCF2L-218ENST00000442625 PTENP60484 403 aa15.24■□□□□ 0.03
MCF2L-218ENST00000442625 NEK9Q8TD19 979 aa15.24■□□□□ 0.03
MCF2L-218ENST00000442625 LMBR1Q8WVP7 490 aa15.24■□□□□ 0.03
MCF2L-218ENST00000442625 SWAP70Q9UH65 585 aa15.24■□□□□ 0.03
MCF2L-218ENST00000442625 TRIM33Q9UPN9 1127 aa15.24■□□□□ 0.03
MCF2L-218ENST00000442625 NUB1Q9Y5A7 615 aa15.24■□□□□ 0.03
MCF2L-218ENST00000442625 KIAA0391O15091 583 aaKnown RBP15.23■□□□□ 0.03
MCF2L-218ENST00000442625 NEBLO76041 1014 aa15.23■□□□□ 0.03
MCF2L-218ENST00000442625 UBOX5O94941 541 aa15.23■□□□□ 0.03
MCF2L-218ENST00000442625 NMT1P30419 496 aaKnown RBP15.23■□□□□ 0.03
MCF2L-218ENST00000442625 PLS1Q14651 629 aa15.23■□□□□ 0.03
MCF2L-218ENST00000442625 DRAP1Q14919 205 aaPredicted RBP15.23■□□□□ 0.03
MCF2L-218ENST00000442625 ZNF746Q6NUN9 644 aaPredicted RBP15.23■□□□□ 0.03
MCF2L-218ENST00000442625 TTC27Q6P3X3 843 aa15.23■□□□□ 0.03
MCF2L-218ENST00000442625 TLDC1Q6P9B6 456 aa15.23■□□□□ 0.03
MCF2L-218ENST00000442625 VPS36Q86VN1 386 aa15.23■□□□□ 0.03
MCF2L-218ENST00000442625 SLFN12Q8IYM2 578 aa15.23■□□□□ 0.03
MCF2L-218ENST00000442625 C3orf20Q8ND61 904 aa15.23■□□□□ 0.03
MCF2L-218ENST00000442625 NSMCE1Q8WV22 266 aa15.23■□□□□ 0.03
MCF2L-218ENST00000442625 LENG9Q96B70 501 aa15.23■□□□□ 0.03
MCF2L-218ENST00000442625 PABPC3Q9H361 631 aaKnown RBP15.23■□□□□ 0.03
MCF2L-218ENST00000442625 DNAJC18Q9H819 358 aa15.23■□□□□ 0.03
MCF2L-218ENST00000442625 KDM4FA0A1W2PPD8 638 aa15.23■□□□□ 0.03
MCF2L-218ENST00000442625 EML1O00423 815 aa15.23■□□□□ 0.03
MCF2L-218ENST00000442625 PDXKO00764 312 aa15.23■□□□□ 0.03
MCF2L-218ENST00000442625 ATMINO43313 823 aaPredicted RBP15.23■□□□□ 0.03
MCF2L-218ENST00000442625 TBCAO75347 108 aaKnown RBP15.23■□□□□ 0.03
MCF2L-218ENST00000442625 MMP13P45452 471 aa15.23■□□□□ 0.03
MCF2L-218ENST00000442625 IKQ13123 557 aaPredicted RBP15.23■□□□□ 0.03
MCF2L-218ENST00000442625 KIAA1755Q5JYT7 1200 aa15.23■□□□□ 0.03
MCF2L-218ENST00000442625 CDC42EP5Q6NZY7 148 aa15.23■□□□□ 0.03
MCF2L-218ENST00000442625 RBM17Q96I25 401 aaKnown RBP15.23■□□□□ 0.03
MCF2L-218ENST00000442625 TYW1Q9NV66 732 aaKnown RBP15.23■□□□□ 0.03
MCF2L-218ENST00000442625 ARFGEF1Q9Y6D6 1849 aa15.23■□□□□ 0.03
MCF2L-218ENST00000442625 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.23■□□□□ 0.03
MCF2L-218ENST00000442625 UBAP1LF5GYI3 381 aa15.23■□□□□ 0.03
MCF2L-218ENST00000442625 CHMP2AO43633 222 aa15.23■□□□□ 0.03
MCF2L-218ENST00000442625 SERPINB2P05120 415 aa15.23■□□□□ 0.03
MCF2L-218ENST00000442625 RPA1P27694 616 aa15.23■□□□□ 0.03
MCF2L-218ENST00000442625 CTTNQ14247 550 aaKnown RBP15.23■□□□□ 0.03
MCF2L-218ENST00000442625 CBWD6Q4V339 395 aa15.23■□□□□ 0.03
MCF2L-218ENST00000442625 CBWD3Q5JTY5 395 aa15.23■□□□□ 0.03
MCF2L-218ENST00000442625 CBWD5Q5RIA9 395 aa15.23■□□□□ 0.03
MCF2L-218ENST00000442625 SLFN13Q68D06 897 aa15.23■□□□□ 0.03
MCF2L-218ENST00000442625 SYCE1Q8N0S2 351 aa15.23■□□□□ 0.03
MCF2L-218ENST00000442625 SPICE1Q8N0Z3 855 aa15.23■□□□□ 0.03
MCF2L-218ENST00000442625 ERMNQ8TAM6 284 aa15.23■□□□□ 0.03
MCF2L-218ENST00000442625 SLC20A1Q8WUM9 679 aa15.23■□□□□ 0.03
MCF2L-218ENST00000442625 CNOT10Q9H9A5 744 aaKnown RBP15.23■□□□□ 0.03
MCF2L-218ENST00000442625 GRHL1Q9NZI5 618 aa15.23■□□□□ 0.03
MCF2L-218ENST00000442625 DNAJC12Q9UKB3 198 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms