RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 MUTYHQ9UIF7 546 aa13.16□□□□□ -0.3
TTC28-203ENST00000442232 INPP5FQ9Y2H2 1132 aa13.16□□□□□ -0.3
TTC28-203ENST00000442232 ERLIN2O94905 339 aa13.15□□□□□ -0.3
TTC28-203ENST00000442232 ATF7P17544 494 aaPredicted RBP13.15□□□□□ -0.3
TTC28-203ENST00000442232 NCBP1Q09161 790 aaKnown RBP13.15□□□□□ -0.3
TTC28-203ENST00000442232 EMC2Q15006 297 aa13.15□□□□□ -0.3
TTC28-203ENST00000442232 LONRF3Q496Y0 759 aa13.15□□□□□ -0.3
TTC28-203ENST00000442232 TPRNQ4KMQ1 711 aa13.15□□□□□ -0.3
TTC28-203ENST00000442232 HERC4Q5GLZ8 1057 aaPredicted RBP13.15□□□□□ -0.3
TTC28-203ENST00000442232 NOMO2Q5JPE7 1267 aa13.15□□□□□ -0.3
TTC28-203ENST00000442232 SRGAP1Q7Z6B7 1085 aa13.15□□□□□ -0.3
TTC28-203ENST00000442232 RNF135Q8IUD6 432 aa13.15□□□□□ -0.3
TTC28-203ENST00000442232 KSR1Q8IVT5 923 aa13.15□□□□□ -0.3
TTC28-203ENST00000442232 SLC39A11Q8N1S5 342 aa13.15□□□□□ -0.3
TTC28-203ENST00000442232 CASP10Q92851 521 aa13.15□□□□□ -0.3
TTC28-203ENST00000442232 DYDC2Q96IM9 177 aa13.15□□□□□ -0.3
TTC28-203ENST00000442232 RPGRIP1Q96KN7 1286 aa13.15□□□□□ -0.3
TTC28-203ENST00000442232 CEP89Q96ST8 783 aa13.15□□□□□ -0.3
TTC28-203ENST00000442232 MTRQ99707 1265 aa13.15□□□□□ -0.3
TTC28-203ENST00000442232 BMP2KQ9NSY1 1161 aaPredicted RBP13.15□□□□□ -0.3
TTC28-203ENST00000442232 GJB4Q9NTQ9 266 aa13.15□□□□□ -0.3
TTC28-203ENST00000442232 FAM105AQ9NUU6 356 aa13.15□□□□□ -0.3
TTC28-203ENST00000442232 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.14□□□□□ -0.31
TTC28-203ENST00000442232 HIDE1A8MVS5 230 aa13.14□□□□□ -0.31
TTC28-203ENST00000442232 ASAP2O43150 1006 aa13.14□□□□□ -0.31
TTC28-203ENST00000442232 CTDNEP1O95476 244 aa13.14□□□□□ -0.31
TTC28-203ENST00000442232 SRGAP2CP0DJJ0 459 aa13.14□□□□□ -0.31
TTC28-203ENST00000442232 HOXB8P17481 243 aaPredicted RBP13.14□□□□□ -0.31
TTC28-203ENST00000442232 FOSBP53539 338 aa13.14□□□□□ -0.31
TTC28-203ENST00000442232 CYP4A11Q02928 519 aa13.14□□□□□ -0.31
TTC28-203ENST00000442232 LAMTOR4Q0VGL1 99 aa13.14□□□□□ -0.31
TTC28-203ENST00000442232 NR5A1Q13285 461 aa13.14□□□□□ -0.31
TTC28-203ENST00000442232 TFDP1Q14186 410 aa13.14□□□□□ -0.31
TTC28-203ENST00000442232 SAFBQ15424 915 aaKnown RBP eCLIP13.14□□□□□ -0.31
TTC28-203ENST00000442232 CES5AQ6NT32 575 aa13.14□□□□□ -0.31
TTC28-203ENST00000442232 ANKRD54Q6NXT1 300 aa13.14□□□□□ -0.31
TTC28-203ENST00000442232 TPH2Q8IWU9 490 aa13.14□□□□□ -0.31
TTC28-203ENST00000442232 NECAB1Q8N987 351 aa13.14□□□□□ -0.31
TTC28-203ENST00000442232 PRPF31Q8WWY3 499 aaKnown RBP13.14□□□□□ -0.31
TTC28-203ENST00000442232 HAS1Q92839 578 aa13.14□□□□□ -0.31
TTC28-203ENST00000442232 LPPQ93052 612 aa13.14□□□□□ -0.31
TTC28-203ENST00000442232 TMEM143Q96AN5 459 aa13.14□□□□□ -0.31
TTC28-203ENST00000442232 MFSD14AQ96MC6 490 aa13.14□□□□□ -0.31
TTC28-203ENST00000442232 FAM193BQ96PV7 902 aaPredicted RBP13.14□□□□□ -0.31
TTC28-203ENST00000442232 GBP3Q9H0R5 595 aa13.14□□□□□ -0.31
TTC28-203ENST00000442232 DHX33Q9H6R0 707 aaKnown RBP13.14□□□□□ -0.31
TTC28-203ENST00000442232 AGPAT5Q9NUQ2 364 aa13.14□□□□□ -0.31
TTC28-203ENST00000442232 RGL1Q9NZL6 768 aa13.14□□□□□ -0.31
TTC28-203ENST00000442232 STK39Q9UEW8 545 aa13.14□□□□□ -0.31
TTC28-203ENST00000442232 CNTNAP2Q9UHC6 1331 aa13.13□□□□□ -0.31
TTC28-203ENST00000442232 SPDYE4A6NLX3 237 aa13.13□□□□□ -0.31
TTC28-203ENST00000442232 LOC730098B7Z3J9 87 aa13.13□□□□□ -0.31
TTC28-203ENST00000442232 NT5C1B-RDH14C9J2C7 533 aa13.13□□□□□ -0.31
TTC28-203ENST00000442232 NEMFO60524 1076 aa13.13□□□□□ -0.31
TTC28-203ENST00000442232 NEK4P51957 841 aa13.13□□□□□ -0.31
TTC28-203ENST00000442232 RBM10P98175 930 aaKnown RBP13.13□□□□□ -0.31
TTC28-203ENST00000442232 GIT2Q14161 759 aa13.13□□□□□ -0.31
TTC28-203ENST00000442232 CTTNQ14247 550 aaKnown RBP13.13□□□□□ -0.31
TTC28-203ENST00000442232 MXD4Q14582 209 aaPredicted RBP13.13□□□□□ -0.31
TTC28-203ENST00000442232 CBX2Q14781 532 aaPredicted RBP13.13□□□□□ -0.31
TTC28-203ENST00000442232 PCBP1Q15365 356 aaKnown RBP eCLIP13.13□□□□□ -0.31
TTC28-203ENST00000442232 ME3Q16798 604 aa13.13□□□□□ -0.31
TTC28-203ENST00000442232 TMEM184AQ6ZMB5 413 aa13.13□□□□□ -0.31
TTC28-203ENST00000442232 ZBTB33Q86T24 672 aa13.13□□□□□ -0.31
TTC28-203ENST00000442232 DIS3L2Q8IYB7 885 aaKnown RBP13.13□□□□□ -0.31
TTC28-203ENST00000442232 RNF149Q8NC42 400 aa13.13□□□□□ -0.31
TTC28-203ENST00000442232 VN1R2Q8NFZ6 395 aa13.13□□□□□ -0.31
TTC28-203ENST00000442232 EIF2AK1Q9BQI3 630 aaKnown RBP13.13□□□□□ -0.31
TTC28-203ENST00000442232 RSAD1Q9HA92 442 aa13.13□□□□□ -0.31
TTC28-203ENST00000442232 IFT122Q9HBG6 1241 aa13.13□□□□□ -0.31
TTC28-203ENST00000442232 TBC1D13Q9NVG8 400 aa13.13□□□□□ -0.31
TTC28-203ENST00000442232 DZANK1Q9NVP4 752 aa13.13□□□□□ -0.31
TTC28-203ENST00000442232 PCDHA12Q9UN75 941 aa13.13□□□□□ -0.31
TTC28-203ENST00000442232 NR2E1Q9Y466 385 aa13.13□□□□□ -0.31
TTC28-203ENST00000442232 PCDHB2Q9Y5E7 798 aa13.13□□□□□ -0.31
TTC28-203ENST00000442232 C5orf42Q9H799 3197 aa13.12□□□□□ -0.31
TTC28-203ENST00000442232 FAM205CA6NFA0 338 aa13.12□□□□□ -0.31
TTC28-203ENST00000442232 C2orf71A6NGG8 1288 aa13.12□□□□□ -0.31
TTC28-203ENST00000442232 DTNBO60941 627 aa13.12□□□□□ -0.31
TTC28-203ENST00000442232 ZNF623O75123 536 aa13.12□□□□□ -0.31
TTC28-203ENST00000442232 CXCL14O95715 111 aa13.12□□□□□ -0.31
TTC28-203ENST00000442232 AXLP30530 894 aa13.12□□□□□ -0.31
TTC28-203ENST00000442232 EARS2Q5JPH6 523 aaKnown RBP13.12□□□□□ -0.31
TTC28-203ENST00000442232 FERMT3Q86UX7 667 aa13.12□□□□□ -0.31
TTC28-203ENST00000442232 HACE1Q8IYU2 909 aa13.12□□□□□ -0.31
TTC28-203ENST00000442232 VPS52Q8N1B4 723 aa13.12□□□□□ -0.31
TTC28-203ENST00000442232 MRPL43Q8N983 215 aaKnown RBP13.12□□□□□ -0.31
TTC28-203ENST00000442232 CNNM3Q8NE01 707 aa13.12□□□□□ -0.31
TTC28-203ENST00000442232 NSUN7Q8NE18 718 aaKnown RBP13.12□□□□□ -0.31
TTC28-203ENST00000442232 SUSD6Q92537 303 aa13.12□□□□□ -0.31
TTC28-203ENST00000442232 EDAQ92838 391 aa13.12□□□□□ -0.31
TTC28-203ENST00000442232 APOL5Q9BWW9 433 aa13.12□□□□□ -0.31
TTC28-203ENST00000442232 UBN1Q9NPG3 1134 aa13.12□□□□□ -0.31
TTC28-203ENST00000442232 KANSL3Q9P2N6 904 aa13.12□□□□□ -0.31
TTC28-203ENST00000442232 WRAP73Q9P2S5 460 aaPredicted RBP13.12□□□□□ -0.31
TTC28-203ENST00000442232 TDRD15B5MCY1 1934 aaKnown RBP13.11□□□□□ -0.31
TTC28-203ENST00000442232 INO80B-WBP1J3KQ70 363 aa13.11□□□□□ -0.31
TTC28-203ENST00000442232 OFD1O75665 1012 aa13.11□□□□□ -0.31
TTC28-203ENST00000442232 DGAT1O75907 488 aa13.11□□□□□ -0.31
TTC28-203ENST00000442232 LARGE1O95461 756 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms