RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 NRCAMQ92823 1304 aa8.08□□□□□ -1.12
CDC42BPA-208ENST00000442054 TRAPPC10P48553 1259 aa8.08□□□□□ -1.12
CDC42BPA-208ENST00000442054 SLC26A2P50443 739 aa8.08□□□□□ -1.12
CDC42BPA-208ENST00000442054 RAB30Q15771 203 aa8.08□□□□□ -1.12
CDC42BPA-208ENST00000442054 HSP90AA4PQ58FG1 418 aa8.08□□□□□ -1.12
CDC42BPA-208ENST00000442054 ZNF572Q7Z3I7 529 aaPredicted RBP8.08□□□□□ -1.12
CDC42BPA-208ENST00000442054 TDHQ8IZJ6 230 aa8.08□□□□□ -1.12
CDC42BPA-208ENST00000442054 TRAPPC12Q8WVT3 735 aa8.08□□□□□ -1.12
CDC42BPA-208ENST00000442054 ATP6V0A4Q9HBG4 840 aa8.08□□□□□ -1.12
CDC42BPA-208ENST00000442054 KBTBD4Q9NVX7 518 aa8.08□□□□□ -1.12
CDC42BPA-208ENST00000442054 CDC25AP30304 524 aa8.08□□□□□ -1.12
CDC42BPA-208ENST00000442054 CASP14P31944 242 aa8.08□□□□□ -1.12
CDC42BPA-208ENST00000442054 HSD17B4P51659 736 aa8.08□□□□□ -1.12
CDC42BPA-208ENST00000442054 PRKCEQ02156 737 aa8.08□□□□□ -1.12
CDC42BPA-208ENST00000442054 RRAGBQ5VZM2 374 aa8.08□□□□□ -1.12
CDC42BPA-208ENST00000442054 SRGAP1Q7Z6B7 1085 aa8.08□□□□□ -1.12
CDC42BPA-208ENST00000442054 ADSSL1Q8N142 457 aa8.08□□□□□ -1.12
CDC42BPA-208ENST00000442054 CCDC51Q96ER9 411 aa8.08□□□□□ -1.12
CDC42BPA-208ENST00000442054 NACC1Q96RE7 527 aa8.08□□□□□ -1.12
CDC42BPA-208ENST00000442054 SUCLA2Q9P2R7 463 aaPredicted RBP8.08□□□□□ -1.12
CDC42BPA-208ENST00000442054 CCDC151A5D8V7 595 aa8.08□□□□□ -1.12
CDC42BPA-208ENST00000442054 GPR182O15218 404 aa8.08□□□□□ -1.12
CDC42BPA-208ENST00000442054 PARNO95453 639 aaKnown RBP8.08□□□□□ -1.12
CDC42BPA-208ENST00000442054 SREBF1P36956 1147 aa8.08□□□□□ -1.12
CDC42BPA-208ENST00000442054 CLCN3P51790 818 aa8.08□□□□□ -1.12
CDC42BPA-208ENST00000442054 YARSP54577 528 aaKnown RBP8.08□□□□□ -1.12
CDC42BPA-208ENST00000442054 AMPD3Q01432 767 aa8.08□□□□□ -1.12
CDC42BPA-208ENST00000442054 PTGDRQ13258 359 aa8.08□□□□□ -1.12
CDC42BPA-208ENST00000442054 TCP11X2Q5H9J9 407 aa8.08□□□□□ -1.12
CDC42BPA-208ENST00000442054 ARL6IP4Q66PJ3 421 aaKnown RBP8.08□□□□□ -1.12
CDC42BPA-208ENST00000442054 TRAPPC11Q7Z392 1133 aa8.08□□□□□ -1.12
CDC42BPA-208ENST00000442054 DEFB123Q8N688 67 aa8.08□□□□□ -1.12
CDC42BPA-208ENST00000442054 PIGOQ8TEQ8 1089 aa8.08□□□□□ -1.12
CDC42BPA-208ENST00000442054 DUSP9Q99956 384 aaKnown RBP8.08□□□□□ -1.12
CDC42BPA-208ENST00000442054 PHF24Q9UPV7 400 aa8.08□□□□□ -1.12
CDC42BPA-208ENST00000442054 NUB1Q9Y5A7 615 aa8.08□□□□□ -1.12
CDC42BPA-208ENST00000442054 ESYT2A0FGR8 921 aa8.07□□□□□ -1.12
CDC42BPA-208ENST00000442054 EFCAB14O75071 495 aa8.07□□□□□ -1.12
CDC42BPA-208ENST00000442054 FOSL2P15408 326 aa8.07□□□□□ -1.12
CDC42BPA-208ENST00000442054 STAT6P42226 847 aa8.07□□□□□ -1.12
CDC42BPA-208ENST00000442054 PHKA2P46019 1235 aa8.07□□□□□ -1.12
CDC42BPA-208ENST00000442054 PURAQ00577 322 aaKnown RBP8.07□□□□□ -1.12
CDC42BPA-208ENST00000442054 PPP2R5AQ15172 486 aa8.07□□□□□ -1.12
CDC42BPA-208ENST00000442054 ZNF484Q5JVG2 852 aa8.07□□□□□ -1.12
CDC42BPA-208ENST00000442054 ZNF746Q6NUN9 644 aaPredicted RBP8.07□□□□□ -1.12
CDC42BPA-208ENST00000442054 SESTD1Q86VW0 696 aa8.07□□□□□ -1.12
CDC42BPA-208ENST00000442054 SLC17A8Q8NDX2 589 aa8.07□□□□□ -1.12
CDC42BPA-208ENST00000442054 DBF4BQ8NFT6 615 aa8.07□□□□□ -1.12
CDC42BPA-208ENST00000442054 URGCPQ8TCY9 931 aa8.07□□□□□ -1.12
CDC42BPA-208ENST00000442054 RIT2Q99578 217 aa8.07□□□□□ -1.12
CDC42BPA-208ENST00000442054 OSMRQ99650 979 aa8.07□□□□□ -1.12
CDC42BPA-208ENST00000442054 KCNG1Q9UIX4 513 aa8.07□□□□□ -1.12
CDC42BPA-208ENST00000442054 CDC23Q9UJX2 597 aa8.07□□□□□ -1.12
CDC42BPA-208ENST00000442054 KIAA1024Q9UPX6 916 aa8.07□□□□□ -1.12
CDC42BPA-208ENST00000442054 DNAJC25-GNG10A0A024R161 153 aa8.07□□□□□ -1.12
CDC42BPA-208ENST00000442054 SPATA31C2B4DYI2 1134 aa8.07□□□□□ -1.12
CDC42BPA-208ENST00000442054 STK25O00506 426 aa8.07□□□□□ -1.12
CDC42BPA-208ENST00000442054 MEIS2O14770 477 aa8.07□□□□□ -1.12
CDC42BPA-208ENST00000442054 ATP9AO75110 1047 aa8.07□□□□□ -1.12
CDC42BPA-208ENST00000442054 ARIH2O95376 493 aa8.07□□□□□ -1.12
CDC42BPA-208ENST00000442054 ZNF200P98182 395 aaPredicted RBP8.07□□□□□ -1.12
CDC42BPA-208ENST00000442054 CDC42EP1Q00587 391 aa8.07□□□□□ -1.12
CDC42BPA-208ENST00000442054 MIIPQ5JXC2 388 aa8.07□□□□□ -1.12
CDC42BPA-208ENST00000442054 ZNF658Q5TYW1 1059 aaPredicted RBP8.07□□□□□ -1.12
CDC42BPA-208ENST00000442054 LHX8Q68G74 356 aa8.07□□□□□ -1.12
CDC42BPA-208ENST00000442054 TTI2Q6NXR4 508 aa8.07□□□□□ -1.12
CDC42BPA-208ENST00000442054 WDR93Q6P2C0 686 aa8.07□□□□□ -1.12
CDC42BPA-208ENST00000442054 BBXQ8WY36 941 aaPredicted RBP8.07□□□□□ -1.12
CDC42BPA-208ENST00000442054 GJA10Q969M2 543 aa8.07□□□□□ -1.12
CDC42BPA-208ENST00000442054 DYDC2Q96IM9 177 aa8.07□□□□□ -1.12
CDC42BPA-208ENST00000442054 INPP4AQ96PE3 977 aaPredicted RBP8.07□□□□□ -1.12
CDC42BPA-208ENST00000442054 DACH1Q9UI36 760 aa8.07□□□□□ -1.12
CDC42BPA-208ENST00000442054 EMSYQ7Z589 1322 aa8.07□□□□□ -1.12
CDC42BPA-208ENST00000442054 RCCD1A6NED2 376 aa8.07□□□□□ -1.12
CDC42BPA-208ENST00000442054 TREHO43280 583 aa8.07□□□□□ -1.12
CDC42BPA-208ENST00000442054 PPP1R11O60927 126 aaPredicted RBP8.07□□□□□ -1.12
CDC42BPA-208ENST00000442054 VTNP04004 478 aa8.07□□□□□ -1.12
CDC42BPA-208ENST00000442054 TPM1P09493 284 aa8.07□□□□□ -1.12
CDC42BPA-208ENST00000442054 KRT17Q04695 432 aa8.07□□□□□ -1.12
CDC42BPA-208ENST00000442054 KCNB1Q14721 858 aa8.07□□□□□ -1.12
CDC42BPA-208ENST00000442054 MFSD5Q6N075 450 aa8.07□□□□□ -1.12
CDC42BPA-208ENST00000442054 ELMSAN1Q6PJG2 1045 aa8.07□□□□□ -1.12
CDC42BPA-208ENST00000442054 GLB1LQ6UWU2 654 aa8.07□□□□□ -1.12
CDC42BPA-208ENST00000442054 IGSF22Q8N9C0 903 aa8.07□□□□□ -1.12
CDC42BPA-208ENST00000442054 RNF149Q8NC42 400 aa8.07□□□□□ -1.12
CDC42BPA-208ENST00000442054 AFAP1L1Q8TED9 768 aa8.07□□□□□ -1.12
CDC42BPA-208ENST00000442054 ATP8B4Q8TF62 1192 aa8.07□□□□□ -1.12
CDC42BPA-208ENST00000442054 LXNQ9BS40 222 aa8.07□□□□□ -1.12
CDC42BPA-208ENST00000442054 IGFLR1Q9H665 355 aa8.07□□□□□ -1.12
CDC42BPA-208ENST00000442054 AGO4Q9HCK5 861 aaKnown RBP8.07□□□□□ -1.12
CDC42BPA-208ENST00000442054 A0A1W2PQC6 194 aa8.06□□□□□ -1.12
CDC42BPA-208ENST00000442054 URI1O94763 535 aaPredicted RBP8.06□□□□□ -1.12
CDC42BPA-208ENST00000442054 CASQ1P31415 396 aa8.06□□□□□ -1.12
CDC42BPA-208ENST00000442054 PRCPP42785 496 aa8.06□□□□□ -1.12
CDC42BPA-208ENST00000442054 GNG11P61952 73 aa8.06□□□□□ -1.12
CDC42BPA-208ENST00000442054 EHHADHQ08426 723 aa8.06□□□□□ -1.12
CDC42BPA-208ENST00000442054 SEMA3FQ13275 785 aa8.06□□□□□ -1.12
CDC42BPA-208ENST00000442054 LONRF2Q1L5Z9 754 aa8.06□□□□□ -1.12
CDC42BPA-208ENST00000442054 MAP3K21Q5TCX8 1036 aa8.06□□□□□ -1.12
CDC42BPA-208ENST00000442054 PAPD7Q5XG87 772 aaKnown RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms