RNA–Protein interactions for RNA: ENST00000441222.7

USP46-201, Transcript of ubiquitin specific peptidase 46, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP46, Length 7,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-201ENST00000441222 PPP6R3Q5H9R7 873 aaPredicted RBP7.09□□□□□ -1.27
USP46-201ENST00000441222 MTHFD1LQ6UB35 978 aa7.09□□□□□ -1.27
USP46-201ENST00000441222 TMEM179Q6ZVK1 233 aa7.09□□□□□ -1.27
USP46-201ENST00000441222 KIAA2013Q8IYS2 634 aa7.09□□□□□ -1.27
USP46-201ENST00000441222 XXYLT1Q8NBI6 393 aa7.09□□□□□ -1.27
USP46-201ENST00000441222 SH3KBP1Q96B97 665 aa7.09□□□□□ -1.27
USP46-201ENST00000441222 TSPAN17Q96FV3 270 aa7.09□□□□□ -1.27
USP46-201ENST00000441222 ZWILCHQ9H900 591 aa7.09□□□□□ -1.27
USP46-201ENST00000441222 HOXC10Q9NYD6 342 aa7.09□□□□□ -1.27
USP46-201ENST00000441222 STMN3Q9NZ72 180 aa7.09□□□□□ -1.27
USP46-201ENST00000441222 GSPT1P15170 499 aaKnown RBP7.09□□□□□ -1.28
USP46-201ENST00000441222 LBRQ14739 615 aaKnown RBP7.09□□□□□ -1.28
USP46-201ENST00000441222 Q3C1V9 767 aa7.09□□□□□ -1.28
USP46-201ENST00000441222 CEP55Q53EZ4 464 aa7.09□□□□□ -1.28
USP46-201ENST00000441222 AARS2Q5JTZ9 985 aaKnown RBP7.09□□□□□ -1.28
USP46-201ENST00000441222 CENPPQ6IPU0 288 aa7.09□□□□□ -1.28
USP46-201ENST00000441222 KSR1Q8IVT5 923 aa7.09□□□□□ -1.28
USP46-201ENST00000441222 DCUN1D1Q96GG9 259 aa7.09□□□□□ -1.28
USP46-201ENST00000441222 SYTL2Q9HCH5 934 aa7.09□□□□□ -1.28
USP46-201ENST00000441222 PLAAQ9Y263 795 aa7.09□□□□□ -1.28
USP46-201ENST00000441222 BAZ2BQ9UIF8 2168 aaKnown RBP7.09□□□□□ -1.28
USP46-201ENST00000441222 MYO3BQ8WXR4 1341 aa7.08□□□□□ -1.28
USP46-201ENST00000441222 USP17L3A6NCW0 530 aa7.08□□□□□ -1.28
USP46-201ENST00000441222 USP17L4A6NCW7 530 aa7.08□□□□□ -1.28
USP46-201ENST00000441222 TBC1D4O60343 1298 aa7.08□□□□□ -1.28
USP46-201ENST00000441222 SORBS3O60504 671 aa7.08□□□□□ -1.28
USP46-201ENST00000441222 HSD17B4P51659 736 aa7.08□□□□□ -1.28
USP46-201ENST00000441222 VCPP55072 806 aaKnown RBP7.08□□□□□ -1.28
USP46-201ENST00000441222 RGS9BPQ6ZS82 235 aa7.08□□□□□ -1.28
USP46-201ENST00000441222 USP17L1Q7RTZ2 530 aa7.08□□□□□ -1.28
USP46-201ENST00000441222 CDKL3Q8IVW4 592 aaPredicted RBP7.08□□□□□ -1.28
USP46-201ENST00000441222 PPP2R3CQ969Q6 453 aa7.08□□□□□ -1.28
USP46-201ENST00000441222 EAF2Q96CJ1 260 aaPredicted RBP7.08□□□□□ -1.28
USP46-201ENST00000441222 FAM20AQ96MK3 541 aa7.08□□□□□ -1.28
USP46-201ENST00000441222 OSBPL3Q9H4L5 887 aa7.08□□□□□ -1.28
USP46-201ENST00000441222 AIPL1Q9NZN9 384 aa7.08□□□□□ -1.28
USP46-201ENST00000441222 ZNF229Q9UJW7 825 aa7.08□□□□□ -1.28
USP46-201ENST00000441222 NDUFB9Q9Y6M9 179 aa7.08□□□□□ -1.28
USP46-201ENST00000441222 HAUS5O94927 633 aa7.08□□□□□ -1.28
USP46-201ENST00000441222 NCKAP1LP55160 1127 aa7.08□□□□□ -1.28
USP46-201ENST00000441222 PSMC1P62191 440 aaKnown RBP7.08□□□□□ -1.28
USP46-201ENST00000441222 DHX34Q14147 1143 aaKnown RBP7.08□□□□□ -1.28
USP46-201ENST00000441222 DPCR1Q3MIW9 517 aa7.08□□□□□ -1.28
USP46-201ENST00000441222 EFHC2Q5JST6 749 aa7.08□□□□□ -1.28
USP46-201ENST00000441222 ZBTB33Q86T24 672 aa7.08□□□□□ -1.28
USP46-201ENST00000441222 TRIM69Q86WT6 500 aa7.08□□□□□ -1.28
USP46-201ENST00000441222 PCYOX1LQ8NBM8 494 aa7.08□□□□□ -1.28
USP46-201ENST00000441222 CNOT8Q9UFF9 292 aaKnown RBP7.08□□□□□ -1.28
USP46-201ENST00000441222 SHROOM2Q13796 1616 aa7.08□□□□□ -1.28
USP46-201ENST00000441222 NCKAP5LQ9HCH0 1330 aa7.08□□□□□ -1.28
USP46-201ENST00000441222 UBXN8O00124 270 aa7.08□□□□□ -1.28
USP46-201ENST00000441222 WDR47O94967 919 aa7.08□□□□□ -1.28
USP46-201ENST00000441222 RUNX1T1Q06455 604 aa7.08□□□□□ -1.28
USP46-201ENST00000441222 DMC1Q14565 340 aa7.08□□□□□ -1.28
USP46-201ENST00000441222 DEPDC1Q5TB30 811 aa7.08□□□□□ -1.28
USP46-201ENST00000441222 LINC00301Q8NCQ3 95 aa7.08□□□□□ -1.28
USP46-201ENST00000441222 PDCD6IPQ8WUM4 868 aaKnown RBP7.08□□□□□ -1.28
USP46-201ENST00000441222 RMDN1Q96DB5 314 aa7.08□□□□□ -1.28
USP46-201ENST00000441222 HEY1Q9Y5J3 304 aa7.08□□□□□ -1.28
USP46-201ENST00000441222 ATP7AQ04656 1500 aa7.08□□□□□ -1.28
USP46-201ENST00000441222 RALAP11233 206 aa7.08□□□□□ -1.28
USP46-201ENST00000441222 SLC9A1P19634 815 aa7.08□□□□□ -1.28
USP46-201ENST00000441222 SDC4P31431 198 aa7.08□□□□□ -1.28
USP46-201ENST00000441222 PEX3P56589 373 aa7.08□□□□□ -1.28
USP46-201ENST00000441222 PPP2R2AP63151 447 aa7.08□□□□□ -1.28
USP46-201ENST00000441222 UGP2Q16851 508 aa7.08□□□□□ -1.28
USP46-201ENST00000441222 SPICE1Q8N0Z3 855 aa7.08□□□□□ -1.28
USP46-201ENST00000441222 GPT2Q8TD30 523 aa7.08□□□□□ -1.28
USP46-201ENST00000441222 SLC10A4Q96EP9 437 aa7.08□□□□□ -1.28
USP46-201ENST00000441222 KIAA0556O60303 1618 aa7.08□□□□□ -1.28
USP46-201ENST00000441222 ZMYND10O75800 440 aa7.08□□□□□ -1.28
USP46-201ENST00000441222 GUCA1CO95843 209 aa7.08□□□□□ -1.28
USP46-201ENST00000441222 STXBP2Q15833 593 aa7.08□□□□□ -1.28
USP46-201ENST00000441222 PPP1R18Q6NYC8 613 aa7.08□□□□□ -1.28
USP46-201ENST00000441222 KCNV1Q6PIU1 500 aa7.08□□□□□ -1.28
USP46-201ENST00000441222 POTEAQ6S8J7 498 aa7.08□□□□□ -1.28
USP46-201ENST00000441222 RTKN2Q8IZC4 609 aa7.08□□□□□ -1.28
USP46-201ENST00000441222 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.08□□□□□ -1.28
USP46-201ENST00000441222 RAPGEF5Q92565 580 aa7.08□□□□□ -1.28
USP46-201ENST00000441222 WWP1Q9H0M0 922 aa7.08□□□□□ -1.28
USP46-201ENST00000441222 VPS11Q9H270 941 aa7.08□□□□□ -1.28
USP46-201ENST00000441222 UVRAGQ9P2Y5 699 aa7.08□□□□□ -1.28
USP46-201ENST00000441222 MAP3K13O43283 966 aa7.08□□□□□ -1.28
USP46-201ENST00000441222 PHKG2P15735 406 aa7.08□□□□□ -1.28
USP46-201ENST00000441222 ROR1Q01973 937 aa7.08□□□□□ -1.28
USP46-201ENST00000441222 POU5F1BQ06416 359 aa7.08□□□□□ -1.28
USP46-201ENST00000441222 KRR1Q13601 381 aaKnown RBP7.08□□□□□ -1.28
USP46-201ENST00000441222 RBBP7Q16576 425 aa7.08□□□□□ -1.28
USP46-201ENST00000441222 CDR2LQ86X02 465 aaPredicted RBP7.08□□□□□ -1.28
USP46-201ENST00000441222 COG1Q8WTW3 980 aa7.08□□□□□ -1.28
USP46-201ENST00000441222 MRPL4Q9BYD3 311 aaKnown RBP7.08□□□□□ -1.28
USP46-201ENST00000441222 LSG1Q9H089 658 aaKnown RBP7.08□□□□□ -1.28
USP46-201ENST00000441222 CASS4Q9NQ75 786 aa7.08□□□□□ -1.28
USP46-201ENST00000441222 H2AFY2Q9P0M6 372 aaPredicted RBP7.08□□□□□ -1.28
USP46-201ENST00000441222 G3BP2Q9UN86 482 aaKnown RBP7.08□□□□□ -1.28
USP46-201ENST00000441222 SYNMO15061 1565 aa7.08□□□□□ -1.28
USP46-201ENST00000441222 DENND3A2RUS2 1198 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 C5orf58C9J3I9 102 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 HADHAP40939 763 aa7.07□□□□□ -1.28
USP46-201ENST00000441222 PSMD7P51665 324 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms