RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 AURKAIP1Q9NWT8 199 aaPredicted RBP4.39□□□□□ -1.71
HMGB3P11-201ENST00000440127 NOP58Q9Y2X3 529 aaKnown RBP4.39□□□□□ -1.71
HMGB3P11-201ENST00000440127 VWA7Q9Y334 891 aa4.39□□□□□ -1.71
HMGB3P11-201ENST00000440127 COL4A3BPQ9Y5P4 624 aa4.39□□□□□ -1.71
HMGB3P11-201ENST00000440127 SLC30A1Q9Y6M5 507 aa4.39□□□□□ -1.71
HMGB3P11-201ENST00000440127 ABCC3O15438 1527 aa4.39□□□□□ -1.71
HMGB3P11-201ENST00000440127 BLMP54132 1417 aaPredicted RBP4.38□□□□□ -1.71
HMGB3P11-201ENST00000440127 ARHGAP31Q2M1Z3 1444 aa4.38□□□□□ -1.71
HMGB3P11-201ENST00000440127 ERVK-7P63135 1459 aa4.38□□□□□ -1.71
HMGB3P11-201ENST00000440127 ADGRB3O60242 1522 aa4.38□□□□□ -1.71
HMGB3P11-201ENST00000440127 ASXL1Q8IXJ9 1541 aa4.38□□□□□ -1.71
HMGB3P11-201ENST00000440127 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.38□□□□□ -1.71
HMGB3P11-201ENST00000440127 PMS2P1A4D2B8 440 aa4.38□□□□□ -1.71
HMGB3P11-201ENST00000440127 CYR61O00622 381 aa4.38□□□□□ -1.71
HMGB3P11-201ENST00000440127 CYP27B1O15528 508 aa4.38□□□□□ -1.71
HMGB3P11-201ENST00000440127 CDC45O75419 566 aa4.38□□□□□ -1.71
HMGB3P11-201ENST00000440127 CLSTN1O94985 981 aa4.38□□□□□ -1.71
HMGB3P11-201ENST00000440127 MMEP08473 750 aa4.38□□□□□ -1.71
HMGB3P11-201ENST00000440127 ZNF888P0CJ79 500 aaPredicted RBP4.38□□□□□ -1.71
HMGB3P11-201ENST00000440127 IGFALSP35858 605 aa4.38□□□□□ -1.71
HMGB3P11-201ENST00000440127 RRADP55042 308 aa4.38□□□□□ -1.71
HMGB3P11-201ENST00000440127 IRF9Q00978 393 aa4.38□□□□□ -1.71
HMGB3P11-201ENST00000440127 ROM1Q03395 351 aa4.38□□□□□ -1.71
HMGB3P11-201ENST00000440127 IDI1Q13907 227 aa4.38□□□□□ -1.71
HMGB3P11-201ENST00000440127 FNDC3BQ53EP0 1204 aaKnown RBP4.38□□□□□ -1.71
HMGB3P11-201ENST00000440127 TMEM177Q53S58 311 aa4.38□□□□□ -1.71
HMGB3P11-201ENST00000440127 AGBL4Q5VU57 503 aa4.38□□□□□ -1.71
HMGB3P11-201ENST00000440127 TMEM200BQ69YZ2 307 aa4.38□□□□□ -1.71
HMGB3P11-201ENST00000440127 CC2D1AQ6P1N0 951 aaPredicted RBP4.38□□□□□ -1.71
HMGB3P11-201ENST00000440127 USP30Q70CQ3 517 aa4.38□□□□□ -1.71
HMGB3P11-201ENST00000440127 FILIP1Q7Z7B0 1213 aa4.38□□□□□ -1.71
HMGB3P11-201ENST00000440127 KIAA0907Q7Z7F0 614 aaPredicted RBP4.38□□□□□ -1.71
HMGB3P11-201ENST00000440127 NOSTRINQ8IVI9 506 aa4.38□□□□□ -1.71
HMGB3P11-201ENST00000440127 PALM2Q8IXS6 379 aa4.38□□□□□ -1.71
HMGB3P11-201ENST00000440127 SYNPOQ8N3V7 929 aa4.38□□□□□ -1.71
HMGB3P11-201ENST00000440127 ZCRB1Q8TBF4 217 aaKnown RBP4.38□□□□□ -1.71
HMGB3P11-201ENST00000440127 Q8TCH9 128 aa4.38□□□□□ -1.71
HMGB3P11-201ENST00000440127 EDAQ92838 391 aa4.38□□□□□ -1.71
HMGB3P11-201ENST00000440127 GBP4Q96PP9 640 aa4.38□□□□□ -1.71
HMGB3P11-201ENST00000440127 ADOQ96SZ5 270 aa4.38□□□□□ -1.71
HMGB3P11-201ENST00000440127 NCOA5Q9HCD5 579 aaKnown RBP4.38□□□□□ -1.71
HMGB3P11-201ENST00000440127 PCDH12Q9NPG4 1184 aa4.38□□□□□ -1.71
HMGB3P11-201ENST00000440127 ACSS2Q9NR19 701 aa4.38□□□□□ -1.71
HMGB3P11-201ENST00000440127 FANCLQ9NW38 375 aa4.38□□□□□ -1.71
HMGB3P11-201ENST00000440127 IFT57Q9NWB7 429 aa4.38□□□□□ -1.71
HMGB3P11-201ENST00000440127 TMEM260Q9NX78 707 aa4.38□□□□□ -1.71
HMGB3P11-201ENST00000440127 BTBD7Q9P203 1132 aa4.38□□□□□ -1.71
HMGB3P11-201ENST00000440127 RCAN3Q9UKA8 241 aa4.38□□□□□ -1.71
HMGB3P11-201ENST00000440127 B3GALT1Q9Y5Z6 326 aa4.38□□□□□ -1.71
HMGB3P11-201ENST00000440127 PTCH2Q9Y6C5 1203 aa4.38□□□□□ -1.71
HMGB3P11-201ENST00000440127 SYNMO15061 1565 aa4.38□□□□□ -1.71
HMGB3P11-201ENST00000440127 GLI2P10070 1586 aa4.38□□□□□ -1.71
HMGB3P11-201ENST00000440127 SETBP1Q9Y6X0 1596 aa4.38□□□□□ -1.71
HMGB3P11-201ENST00000440127 ABCA6Q8N139 1617 aa4.38□□□□□ -1.71
HMGB3P11-201ENST00000440127 PIK3C2GO75747 1445 aa4.38□□□□□ -1.71
HMGB3P11-201ENST00000440127 KIF1BO60333 1816 aa4.37□□□□□ -1.71
HMGB3P11-201ENST00000440127 DIP2CQ9Y2E4 1556 aa4.37□□□□□ -1.71
HMGB3P11-201ENST00000440127 TCRBV16S1A1N1A0A5B0 115 aa4.37□□□□□ -1.71
HMGB3P11-201ENST00000440127 MARCH6O60337 910 aa4.37□□□□□ -1.71
HMGB3P11-201ENST00000440127 H2AFYO75367 372 aaKnown RBP4.37□□□□□ -1.71
HMGB3P11-201ENST00000440127 RASGRP1O95267 797 aa4.37□□□□□ -1.71
HMGB3P11-201ENST00000440127 ASLP04424 464 aa4.37□□□□□ -1.71
HMGB3P11-201ENST00000440127 ADCY8P40145 1251 aa4.37□□□□□ -1.71
HMGB3P11-201ENST00000440127 RRP1P56182 461 aaKnown RBP4.37□□□□□ -1.71
HMGB3P11-201ENST00000440127 SQSTM1Q13501 440 aa4.37□□□□□ -1.71
HMGB3P11-201ENST00000440127 TMEM132BQ14DG7 1078 aa4.37□□□□□ -1.71
HMGB3P11-201ENST00000440127 ZNF174Q15697 407 aa4.37□□□□□ -1.71
HMGB3P11-201ENST00000440127 TCTN3Q6NUS6 607 aa4.37□□□□□ -1.71
HMGB3P11-201ENST00000440127 UBE2R2Q712K3 238 aaPredicted RBP4.37□□□□□ -1.71
HMGB3P11-201ENST00000440127 RPUSD2Q8IZ73 545 aaKnown RBP4.37□□□□□ -1.71
HMGB3P11-201ENST00000440127 ASB15Q8WXK1 588 aa4.37□□□□□ -1.71
HMGB3P11-201ENST00000440127 GFM2Q969S9 779 aaKnown RBP4.37□□□□□ -1.71
HMGB3P11-201ENST00000440127 CCDC136Q96JN2 1154 aa4.37□□□□□ -1.71
HMGB3P11-201ENST00000440127 FOXB1Q99853 325 aa4.37□□□□□ -1.71
HMGB3P11-201ENST00000440127 UCKL1Q9NWZ5 548 aa4.37□□□□□ -1.71
HMGB3P11-201ENST00000440127 FAM184BQ9ULE4 1060 aa4.37□□□□□ -1.71
HMGB3P11-201ENST00000440127 COQ6Q9Y2Z9 468 aa4.37□□□□□ -1.71
HMGB3P11-201ENST00000440127 PRKAB1Q9Y478 270 aa4.37□□□□□ -1.71
HMGB3P11-201ENST00000440127 ZFYVE9O95405 1425 aa4.37□□□□□ -1.71
HMGB3P11-201ENST00000440127 YEATS2Q9ULM3 1422 aa4.37□□□□□ -1.71
HMGB3P11-201ENST00000440127 H7C1D1 291 aa4.36□□□□□ -1.71
HMGB3P11-201ENST00000440127 DNAJC6O75061 913 aa4.36□□□□□ -1.71
HMGB3P11-201ENST00000440127 CYP17A1P05093 508 aa4.36□□□□□ -1.71
HMGB3P11-201ENST00000440127 IBSPP21815 317 aaPredicted RBP4.36□□□□□ -1.71
HMGB3P11-201ENST00000440127 MC4RP32245 332 aa4.36□□□□□ -1.71
HMGB3P11-201ENST00000440127 MRE11P49959 708 aa4.36□□□□□ -1.71
HMGB3P11-201ENST00000440127 MOGSQ13724 837 aa4.36□□□□□ -1.71
HMGB3P11-201ENST00000440127 KANK2Q63ZY3 851 aa4.36□□□□□ -1.71
HMGB3P11-201ENST00000440127 KLHDC10Q6PID8 442 aa4.36□□□□□ -1.71
HMGB3P11-201ENST00000440127 CRIP3Q6Q6R5 217 aa4.36□□□□□ -1.71
HMGB3P11-201ENST00000440127 OVCH1Q7RTY7 1134 aa4.36□□□□□ -1.71
HMGB3P11-201ENST00000440127 ADGRE4PQ86SQ3 457 aa4.36□□□□□ -1.71
HMGB3P11-201ENST00000440127 MORC1Q86VD1 984 aa4.36□□□□□ -1.71
HMGB3P11-201ENST00000440127 NGEFQ8N5V2 710 aa4.36□□□□□ -1.71
HMGB3P11-201ENST00000440127 IGSF22Q8N9C0 903 aa4.36□□□□□ -1.71
HMGB3P11-201ENST00000440127 CHST14Q8NCH0 376 aa4.36□□□□□ -1.71
HMGB3P11-201ENST00000440127 SLC7A14Q8TBB6 771 aa4.36□□□□□ -1.71
HMGB3P11-201ENST00000440127 APPBP2Q92624 585 aa4.36□□□□□ -1.71
HMGB3P11-201ENST00000440127 DLG3Q92796 817 aa4.36□□□□□ -1.71
HMGB3P11-201ENST00000440127 RPGRQ92834 1020 aaKnown RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms