RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 PDE2AO00408 941 aaPredicted RBP15.39■□□□□ 0.05
LIMD1-202ENST00000440097 SLC16A4O15374 487 aa15.39■□□□□ 0.05
LIMD1-202ENST00000440097 MAFGO15525 162 aa15.39■□□□□ 0.05
LIMD1-202ENST00000440097 C2orf54Q08AI8 447 aa15.39■□□□□ 0.05
LIMD1-202ENST00000440097 ASIC2Q16515 512 aa15.39■□□□□ 0.05
LIMD1-202ENST00000440097 EAPPQ56P03 285 aaPredicted RBP15.39■□□□□ 0.05
LIMD1-202ENST00000440097 ZNF746Q6NUN9 644 aaPredicted RBP15.39■□□□□ 0.05
LIMD1-202ENST00000440097 SEPT14Q6ZU15 432 aa15.39■□□□□ 0.05
LIMD1-202ENST00000440097 ATP6V0A1Q93050 837 aa15.39■□□□□ 0.05
LIMD1-202ENST00000440097 CDHR1Q96JP9 859 aa15.39■□□□□ 0.05
LIMD1-202ENST00000440097 RPGRIP1Q96KN7 1286 aa15.39■□□□□ 0.05
LIMD1-202ENST00000440097 TSGA10Q9BZW7 698 aa15.39■□□□□ 0.05
LIMD1-202ENST00000440097 UBE4BO95155 1302 aa15.39■□□□□ 0.05
LIMD1-202ENST00000440097 TISP43B9A030 160 aa15.38■□□□□ 0.05
LIMD1-202ENST00000440097 ATP2A1O14983 1001 aa15.38■□□□□ 0.05
LIMD1-202ENST00000440097 RGS20O76081 388 aa15.38■□□□□ 0.05
LIMD1-202ENST00000440097 SERPING1P05155 500 aa15.38■□□□□ 0.05
LIMD1-202ENST00000440097 TRIM49P0CI25 452 aa15.38■□□□□ 0.05
LIMD1-202ENST00000440097 TRIM49CP0CI26 452 aa15.38■□□□□ 0.05
LIMD1-202ENST00000440097 UCHL3P15374 230 aa15.38■□□□□ 0.05
LIMD1-202ENST00000440097 PON1P27169 355 aa15.38■□□□□ 0.05
LIMD1-202ENST00000440097 GNGT1P63211 74 aa15.38■□□□□ 0.05
LIMD1-202ENST00000440097 TTC19Q6DKK2 380 aaPredicted RBP15.38■□□□□ 0.05
LIMD1-202ENST00000440097 KCNV1Q6PIU1 500 aa15.38■□□□□ 0.05
LIMD1-202ENST00000440097 OTUD6AQ7L8S5 288 aa15.38■□□□□ 0.05
LIMD1-202ENST00000440097 HAUS6Q7Z4H7 955 aa15.38■□□□□ 0.05
LIMD1-202ENST00000440097 SLC9A2Q9UBY0 812 aa15.38■□□□□ 0.05
LIMD1-202ENST00000440097 SEPT9Q9UHD8 586 aaPredicted RBP15.38■□□□□ 0.05
LIMD1-202ENST00000440097 GRIN2DO15399 1336 aa15.38■□□□□ 0.05
LIMD1-202ENST00000440097 PSAPP07602 524 aa15.38■□□□□ 0.05
LIMD1-202ENST00000440097 MNAT1P51948 309 aa15.38■□□□□ 0.05
LIMD1-202ENST00000440097 STXBP2Q15833 593 aa15.38■□□□□ 0.05
LIMD1-202ENST00000440097 SH3D19Q5HYK7 790 aa15.38■□□□□ 0.05
LIMD1-202ENST00000440097 ANO5Q75V66 913 aa15.38■□□□□ 0.05
LIMD1-202ENST00000440097 TMEM206Q9H813 350 aa15.38■□□□□ 0.05
LIMD1-202ENST00000440097 EIF3HO15372 352 aaKnown RBP eCLIP15.37■□□□□ 0.053e-7■■■■□ 23.9
LIMD1-202ENST00000440097 LYPLA2O95372 231 aa15.37■□□□□ 0.05
LIMD1-202ENST00000440097 KCNA2P16389 499 aa15.37■□□□□ 0.05
LIMD1-202ENST00000440097 WDR78Q5VTH9 848 aa15.37■□□□□ 0.05
LIMD1-202ENST00000440097 ACCSQ96QU6 501 aa15.37■□□□□ 0.05
LIMD1-202ENST00000440097 KIFC3Q9BVG8 833 aa15.37■□□□□ 0.05
LIMD1-202ENST00000440097 GANQ9H2C0 597 aa15.37■□□□□ 0.05
LIMD1-202ENST00000440097 TELO2Q9Y4R8 837 aa15.37■□□□□ 0.05
LIMD1-202ENST00000440097 MYPNQ86TC9 1320 aa15.37■□□□□ 0.05
LIMD1-202ENST00000440097 PARP14Q460N5 1801 aa15.37■□□□□ 0.05
LIMD1-202ENST00000440097 CEP350Q5VT06 3117 aa15.37■□□□□ 0.05
LIMD1-202ENST00000440097 TLR2O60603 784 aa15.37■□□□□ 0.05
LIMD1-202ENST00000440097 KRT13P13646 458 aa15.37■□□□□ 0.05
LIMD1-202ENST00000440097 SMTNP53814 917 aa15.37■□□□□ 0.05
LIMD1-202ENST00000440097 SOX10P56693 466 aa15.37■□□□□ 0.05
LIMD1-202ENST00000440097 KLHDC7AQ5VTJ3 777 aa15.37■□□□□ 0.05
LIMD1-202ENST00000440097 HGSNATQ68CP4 663 aa15.37■□□□□ 0.05
LIMD1-202ENST00000440097 SND1Q7KZF4 910 aaKnown RBP eCLIP15.37■□□□□ 0.05
LIMD1-202ENST00000440097 CYFIP1Q7L576 1253 aa15.37■□□□□ 0.05
LIMD1-202ENST00000440097 AENQ8WTP8 325 aaKnown RBP15.37■□□□□ 0.05
LIMD1-202ENST00000440097 BTBD7Q9P203 1132 aa15.37■□□□□ 0.05
LIMD1-202ENST00000440097 ADAMTS1Q9UHI8 967 aa15.37■□□□□ 0.05
LIMD1-202ENST00000440097 DICER1Q9UPY3 1922 aaKnown RBP15.37■□□□□ 0.05
LIMD1-202ENST00000440097 ECM2O94769 699 aaPredicted RBP15.36■□□□□ 0.05
LIMD1-202ENST00000440097 ACTR2P61160 394 aa15.36■□□□□ 0.05
LIMD1-202ENST00000440097 DMP1Q13316 513 aaPredicted RBP15.36■□□□□ 0.05
LIMD1-202ENST00000440097 GJB7Q6PEY0 223 aa15.36■□□□□ 0.05
LIMD1-202ENST00000440097 LBX2Q6XYB7 198 aa15.36■□□□□ 0.05
LIMD1-202ENST00000440097 EEPD1Q7L9B9 569 aa15.36■□□□□ 0.05
LIMD1-202ENST00000440097 CHST13Q8NET6 341 aa15.36■□□□□ 0.05
LIMD1-202ENST00000440097 MLXIPQ9HAP2 919 aa15.36■□□□□ 0.05
LIMD1-202ENST00000440097 LUC7LQ9NQ29 371 aaKnown RBP15.36■□□□□ 0.05
LIMD1-202ENST00000440097 ANKEF1Q9NU02 776 aa15.36■□□□□ 0.05
LIMD1-202ENST00000440097 RLFQ13129 1914 aa15.36■□□□□ 0.05
LIMD1-202ENST00000440097 SSU72P8A0A1W2PR75 194 aa15.36■□□□□ 0.05
LIMD1-202ENST00000440097 ANKRD13AQ8IZ07 590 aa15.36■□□□□ 0.05
LIMD1-202ENST00000440097 SYN2Q92777 582 aaPredicted RBP15.36■□□□□ 0.05
LIMD1-202ENST00000440097 CBWD1Q9BRT8 395 aa15.36■□□□□ 0.05
LIMD1-202ENST00000440097 MKNK1Q9BUB5 465 aa15.36■□□□□ 0.05
LIMD1-202ENST00000440097 SBF1O95248 1867 aa15.36■□□□□ 0.05
LIMD1-202ENST00000440097 ZNF862O60290 1169 aa15.36■□□□□ 0.05
LIMD1-202ENST00000440097 DKC1O60832 514 aaKnown RBP eCLIP15.36■□□□□ 0.05
LIMD1-202ENST00000440097 TACC1O75410 805 aa15.36■□□□□ 0.05
LIMD1-202ENST00000440097 MOCS3O95396 460 aa15.36■□□□□ 0.05
LIMD1-202ENST00000440097 FMO5P49326 533 aa15.36■□□□□ 0.05
LIMD1-202ENST00000440097 GSCP56915 257 aaPredicted RBP15.36■□□□□ 0.05
LIMD1-202ENST00000440097 FSTL1Q12841 308 aa15.36■□□□□ 0.05
LIMD1-202ENST00000440097 ALCAMQ13740 583 aa15.36■□□□□ 0.05
LIMD1-202ENST00000440097 CCDC60Q8IWA6 550 aaPredicted RBP15.36■□□□□ 0.05
LIMD1-202ENST00000440097 RDM1Q8NG50 284 aa15.36■□□□□ 0.05
LIMD1-202ENST00000440097 CDCA5Q96FF9 252 aa15.36■□□□□ 0.05
LIMD1-202ENST00000440097 PLCB1Q9NQ66 1216 aa15.36■□□□□ 0.05
LIMD1-202ENST00000440097 BUB1O43683 1085 aa15.35■□□□□ 0.05
LIMD1-202ENST00000440097 PPP1R37O75864 691 aa15.35■□□□□ 0.05
LIMD1-202ENST00000440097 PRKCEQ02156 737 aa15.35■□□□□ 0.05
LIMD1-202ENST00000440097 ERO1BQ86YB8 467 aa15.35■□□□□ 0.05
LIMD1-202ENST00000440097 SPATC1LQ9H0A9 340 aa15.35■□□□□ 0.05
LIMD1-202ENST00000440097 KMT5AQ9NQR1 393 aa15.35■□□□□ 0.05
LIMD1-202ENST00000440097 LOXHD1Q8IVV2 1947 aa15.35■□□□□ 0.05
LIMD1-202ENST00000440097 EPHX2P34913 555 aa15.35■□□□□ 0.05
LIMD1-202ENST00000440097 BFSP1Q12934 665 aa15.35■□□□□ 0.05
LIMD1-202ENST00000440097 MTERF2Q49AM1 385 aa15.35■□□□□ 0.05
LIMD1-202ENST00000440097 MIS18BP1Q6P0N0 1132 aa15.35■□□□□ 0.05
LIMD1-202ENST00000440097 HDAC7Q8WUI4 952 aa15.35■□□□□ 0.05
LIMD1-202ENST00000440097 ALS2CR12Q96Q35 445 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms