RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 EOMESO95936 686 aa26.22■■□□□ 1.79
VARS-217ENST00000440048 FAM173BQ6P4H8 233 aa26.22■■□□□ 1.79
VARS-217ENST00000440048 KCNK18Q7Z418 384 aa26.22■■□□□ 1.79
VARS-217ENST00000440048 NFKBIZQ9BYH8 718 aa26.22■■□□□ 1.79
VARS-217ENST00000440048 TMEM117Q9H0C3 514 aa26.22■■□□□ 1.79
VARS-217ENST00000440048 CLIC4Q9Y696 253 aa26.22■■□□□ 1.79
VARS-217ENST00000440048 MYO7AQ13402 2215 aa26.21■■□□□ 1.79
VARS-217ENST00000440048 INO80B-WBP1J3KQ70 363 aa26.21■■□□□ 1.79
VARS-217ENST00000440048 HOXA11P31270 313 aaPredicted RBP26.21■■□□□ 1.79
VARS-217ENST00000440048 MBTD1Q05BQ5 628 aa26.21■■□□□ 1.79
VARS-217ENST00000440048 ZRSR1Q15695 479 aaKnown RBP26.21■■□□□ 1.79
VARS-217ENST00000440048 HYIQ5T013 277 aa26.21■■□□□ 1.79
VARS-217ENST00000440048 ATXN2LQ8WWM7 1075 aaKnown RBP26.21■■□□□ 1.79
VARS-217ENST00000440048 CASD1Q96PB1 797 aa26.21■■□□□ 1.79
VARS-217ENST00000440048 PNMA5Q96PV4 448 aa26.21■■□□□ 1.79
VARS-217ENST00000440048 C11orf84Q9BUA3 381 aaPredicted RBP26.21■■□□□ 1.79
VARS-217ENST00000440048 PRDM6Q9NQX0 595 aa26.21■■□□□ 1.79
VARS-217ENST00000440048 FAM105AQ9NUU6 356 aa26.21■■□□□ 1.79
VARS-217ENST00000440048 THEGQ9P2T0 379 aa26.21■■□□□ 1.79
VARS-217ENST00000440048 VCANP13611 3396 aa26.2■■□□□ 1.79
VARS-217ENST00000440048 LRRIQ4A6NIV6 560 aa26.2■■□□□ 1.78
VARS-217ENST00000440048 ERLIN2O94905 339 aa26.2■■□□□ 1.78
VARS-217ENST00000440048 SKIP12755 728 aa26.2■■□□□ 1.78
VARS-217ENST00000440048 PCBP1Q15365 356 aaKnown RBP eCLIP26.2■■□□□ 1.782e-6■■■■■ 41.5
VARS-217ENST00000440048 CLLU1OSQ5K130 101 aa26.2■■□□□ 1.78
VARS-217ENST00000440048 BSNDQ8WZ55 320 aa26.2■■□□□ 1.78
VARS-217ENST00000440048 MRPL38Q96DV4 380 aaKnown RBP26.2■■□□□ 1.78
VARS-217ENST00000440048 PLVAPQ9BX97 442 aa26.2■■□□□ 1.78
VARS-217ENST00000440048 COL25A1Q9BXS0 654 aaPredicted RBP26.2■■□□□ 1.78
VARS-217ENST00000440048 TYW1Q9NV66 732 aaKnown RBP26.2■■□□□ 1.78
VARS-217ENST00000440048 HCSTQ9UBK5 93 aa26.2■■□□□ 1.78
VARS-217ENST00000440048 TSPAN1O60635 241 aa26.19■■□□□ 1.78
VARS-217ENST00000440048 ZNF623O75123 536 aa26.19■■□□□ 1.78
VARS-217ENST00000440048 HSP90AA1P07900 732 aaKnown RBP26.19■■□□□ 1.78
VARS-217ENST00000440048 RAB27AP51159 221 aa26.19■■□□□ 1.78
VARS-217ENST00000440048 SPOUT1Q5T280 376 aaKnown RBP26.19■■□□□ 1.78
VARS-217ENST00000440048 ABI1Q8IZP0 508 aa26.19■■□□□ 1.78
VARS-217ENST00000440048 AK8Q96MA6 479 aa26.19■■□□□ 1.78
VARS-217ENST00000440048 POLD4Q9HCU8 107 aa26.19■■□□□ 1.78
VARS-217ENST00000440048 GRM6O15303 877 aa26.18■■□□□ 1.78
VARS-217ENST00000440048 GRIN1Q05586 938 aa26.18■■□□□ 1.78
VARS-217ENST00000440048 PTPAQ15257 358 aa26.18■■□□□ 1.78
VARS-217ENST00000440048 AMHR2Q16671 573 aa26.18■■□□□ 1.78
VARS-217ENST00000440048 PTPROQ16827 1216 aa26.18■■□□□ 1.78
VARS-217ENST00000440048 TJAP1Q5JTD0 557 aa26.18■■□□□ 1.78
VARS-217ENST00000440048 UBXN11Q5T124 520 aa26.18■■□□□ 1.78
VARS-217ENST00000440048 CABP7Q86V35 215 aa26.18■■□□□ 1.78
VARS-217ENST00000440048 HELQQ8TDG4 1101 aa26.18■■□□□ 1.78
VARS-217ENST00000440048 LPPQ93052 612 aa26.18■■□□□ 1.78
VARS-217ENST00000440048 P2RX5Q93086 422 aa26.18■■□□□ 1.78
VARS-217ENST00000440048 PLIN2Q99541 437 aa26.18■■□□□ 1.78
VARS-217ENST00000440048 NT5C3AQ9H0P0 336 aa26.18■■□□□ 1.78
VARS-217ENST00000440048 ZSCAN16Q9H4T2 348 aaPredicted RBP26.18■■□□□ 1.78
VARS-217ENST00000440048 CWH43Q9H720 699 aa26.18■■□□□ 1.78
VARS-217ENST00000440048 BRWD1Q9NSI6 2320 aa26.18■■□□□ 1.78
VARS-217ENST00000440048 PCDHB2Q9Y5E7 798 aa26.18■■□□□ 1.78
VARS-217ENST00000440048 ATG2AQ2TAZ0 1938 aa26.18■■□□□ 1.78
VARS-217ENST00000440048 AXLP30530 894 aa26.17■■□□□ 1.78
VARS-217ENST00000440048 LONRF3Q496Y0 759 aa26.17■■□□□ 1.78
VARS-217ENST00000440048 NAALADL2Q58DX5 795 aa26.17■■□□□ 1.78
VARS-217ENST00000440048 CDCA2Q69YH5 1023 aaPredicted RBP26.17■■□□□ 1.78
VARS-217ENST00000440048 LRRC55Q6ZSA7 311 aa26.17■■□□□ 1.78
VARS-217ENST00000440048 CPB2Q96IY4 423 aa26.17■■□□□ 1.78
VARS-217ENST00000440048 CDK5RAP3Q96JB5 506 aa26.17■■□□□ 1.78
VARS-217ENST00000440048 MEIS3P2A8K0S8 358 aa26.16■■□□□ 1.78
VARS-217ENST00000440048 LONP1P36776 959 aaKnown RBP26.16■■□□□ 1.78
VARS-217ENST00000440048 NCBP1Q09161 790 aaKnown RBP26.16■■□□□ 1.78
VARS-217ENST00000440048 SKIV2LQ15477 1246 aaKnown RBP26.16■■□□□ 1.78
VARS-217ENST00000440048 TMEM119Q4V9L6 283 aa26.16■■□□□ 1.78
VARS-217ENST00000440048 RINT1Q6NUQ1 792 aa26.16■■□□□ 1.78
VARS-217ENST00000440048 ZBTB8OSQ8IWT0 167 aa26.16■■□□□ 1.78
VARS-217ENST00000440048 KCTD17Q8N5Z5 321 aa26.16■■□□□ 1.78
VARS-217ENST00000440048 KLHL23Q8NBE8 558 aa26.16■■□□□ 1.78
VARS-217ENST00000440048 KIFAP3Q92845 792 aa26.16■■□□□ 1.78
VARS-217ENST00000440048 RUSC1Q9BVN2 902 aa26.16■■□□□ 1.78
VARS-217ENST00000440048 ALG13Q9NP73 1137 aaKnown RBP26.16■■□□□ 1.78
VARS-217ENST00000440048 AAASQ9NRG9 546 aa26.16■■□□□ 1.78
VARS-217ENST00000440048 PLAGL2Q9UPG8 496 aa26.16■■□□□ 1.78
VARS-217ENST00000440048 MYH15Q9Y2K3 1946 aa26.16■■□□□ 1.78
VARS-217ENST00000440048 B4GALT5O43286 388 aa26.15■■□□□ 1.78
VARS-217ENST00000440048 SLC26A4O43511 780 aa26.15■■□□□ 1.78
VARS-217ENST00000440048 ITGB1P05556 798 aa26.15■■□□□ 1.78
VARS-217ENST00000440048 ARF4P18085 180 aaPredicted RBP26.15■■□□□ 1.78
VARS-217ENST00000440048 UBA7P41226 1012 aa26.15■■□□□ 1.78
VARS-217ENST00000440048 NAMPTP43490 491 aa26.15■■□□□ 1.78
VARS-217ENST00000440048 MRPS5P82675 430 aaKnown RBP26.15■■□□□ 1.78
VARS-217ENST00000440048 CEBPZQ03701 1054 aaKnown RBP26.15■■□□□ 1.78
VARS-217ENST00000440048 PPP2R5AQ15172 486 aa26.15■■□□□ 1.78
VARS-217ENST00000440048 NOTUMQ6P988 496 aa26.15■■□□□ 1.78
VARS-217ENST00000440048 C1orf186Q6ZWK4 172 aa26.15■■□□□ 1.78
VARS-217ENST00000440048 MRPL10Q7Z7H8 261 aaKnown RBP26.15■■□□□ 1.78
VARS-217ENST00000440048 LRRC43Q8N309 656 aa26.15■■□□□ 1.78
VARS-217ENST00000440048 COLGALT1Q8NBJ5 622 aa26.15■■□□□ 1.78
VARS-217ENST00000440048 PGBD4Q96DM1 585 aa26.15■■□□□ 1.78
VARS-217ENST00000440048 CCDC51Q96ER9 411 aa26.15■■□□□ 1.78
VARS-217ENST00000440048 LMAN2LQ9H0V9 348 aa26.15■■□□□ 1.78
VARS-217ENST00000440048 C2orf40Q9H1Z8 148 aa26.15■■□□□ 1.78
VARS-217ENST00000440048 PCDHB12Q9Y5F1 795 aa26.15■■□□□ 1.78
VARS-217ENST00000440048 PLXNA4Q9HCM2 1894 aa26.15■■□□□ 1.78
VARS-217ENST00000440048 MARCKSP29966 332 aaPredicted RBP26.14■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms