RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 PRPF31Q8WWY3 499 aaKnown RBP20.61■□□□□ 0.89
AC004540.1-201ENST00000439120 TNFRSF25Q93038 417 aa20.61■□□□□ 0.89
AC004540.1-201ENST00000439120 TMEM143Q96AN5 459 aa20.61■□□□□ 0.89
AC004540.1-201ENST00000439120 DHX33Q9H6R0 707 aaKnown RBP20.61■□□□□ 0.89
AC004540.1-201ENST00000439120 NGRNQ9NPE2 291 aaKnown RBP20.61■□□□□ 0.89
AC004540.1-201ENST00000439120 CLEC1BQ9P126 229 aa20.61■□□□□ 0.89
AC004540.1-201ENST00000439120 C19orf67A6NJJ6 358 aa20.6■□□□□ 0.89
AC004540.1-201ENST00000439120 FSCN2O14926 492 aa20.6■□□□□ 0.89
AC004540.1-201ENST00000439120 DCXO43602 365 aa20.6■□□□□ 0.89
AC004540.1-201ENST00000439120 NEMFO60524 1076 aa20.6■□□□□ 0.89
AC004540.1-201ENST00000439120 EYA4O95677 639 aa20.6■□□□□ 0.89
AC004540.1-201ENST00000439120 GLP2RO95838 553 aa20.6■□□□□ 0.89
AC004540.1-201ENST00000439120 CA8P35219 290 aa20.6■□□□□ 0.89
AC004540.1-201ENST00000439120 SPIRE1Q08AE8 756 aa20.6■□□□□ 0.89
AC004540.1-201ENST00000439120 COASYQ13057 564 aa20.6■□□□□ 0.89
AC004540.1-201ENST00000439120 BMS1Q14692 1282 aaKnown RBP20.6■□□□□ 0.89
AC004540.1-201ENST00000439120 SAFBQ15424 915 aaKnown RBP eCLIP20.6■□□□□ 0.89
AC004540.1-201ENST00000439120 DUSP6Q16828 381 aa20.6■□□□□ 0.89
AC004540.1-201ENST00000439120 LONRF3Q496Y0 759 aa20.6■□□□□ 0.89
AC004540.1-201ENST00000439120 SMRP1Q8NCR6 262 aa20.6■□□□□ 0.89
AC004540.1-201ENST00000439120 MTRQ99707 1265 aa20.6■□□□□ 0.89
AC004540.1-201ENST00000439120 TRAIPQ9BWF2 469 aa20.6■□□□□ 0.89
AC004540.1-201ENST00000439120 FAM105AQ9NUU6 356 aa20.6■□□□□ 0.89
AC004540.1-201ENST00000439120 ARID2Q68CP9 1835 aa20.6■□□□□ 0.89
AC004540.1-201ENST00000439120 CARNS1A5YM72 827 aa20.59■□□□□ 0.89
AC004540.1-201ENST00000439120 ASAP2O43150 1006 aa20.59■□□□□ 0.89
AC004540.1-201ENST00000439120 ZC3H11AO75152 810 aaKnown RBP eCLIP20.59■□□□□ 0.89
AC004540.1-201ENST00000439120 BCAR1P56945 870 aa20.59■□□□□ 0.89
AC004540.1-201ENST00000439120 RNASELQ05823 741 aaKnown RBP20.59■□□□□ 0.89
AC004540.1-201ENST00000439120 LAMTOR4Q0VGL1 99 aa20.59■□□□□ 0.89
AC004540.1-201ENST00000439120 SRGAP1Q7Z6B7 1085 aa20.59■□□□□ 0.89
AC004540.1-201ENST00000439120 LPPQ93052 612 aa20.59■□□□□ 0.89
AC004540.1-201ENST00000439120 PGBD4Q96DM1 585 aa20.59■□□□□ 0.89
AC004540.1-201ENST00000439120 TMEM169Q96HH4 297 aa20.59■□□□□ 0.89
AC004540.1-201ENST00000439120 EIF2AK1Q9BQI3 630 aaKnown RBP20.59■□□□□ 0.89
AC004540.1-201ENST00000439120 TTC12Q9H892 705 aaPredicted RBP20.59■□□□□ 0.89
AC004540.1-201ENST00000439120 IFT122Q9HBG6 1241 aa20.59■□□□□ 0.89
AC004540.1-201ENST00000439120 AGPAT5Q9NUQ2 364 aa20.59■□□□□ 0.89
AC004540.1-201ENST00000439120 INPP5FQ9Y2H2 1132 aa20.59■□□□□ 0.89
AC004540.1-201ENST00000439120 ERLIN2O94905 339 aa20.58■□□□□ 0.89
AC004540.1-201ENST00000439120 TXKP42681 527 aa20.58■□□□□ 0.89
AC004540.1-201ENST00000439120 SMC1AQ14683 1233 aaKnown RBP20.58■□□□□ 0.89
AC004540.1-201ENST00000439120 SLC39A11Q8N1S5 342 aa20.58■□□□□ 0.89
AC004540.1-201ENST00000439120 RNF149Q8NC42 400 aa20.58■□□□□ 0.89
AC004540.1-201ENST00000439120 C11orf16Q9NQ32 467 aa20.58■□□□□ 0.89
AC004540.1-201ENST00000439120 LIMCH1Q9UPQ0 1083 aa20.58■□□□□ 0.89
AC004540.1-201ENST00000439120 SLITRK3O94933 977 aa20.57■□□□□ 0.88
AC004540.1-201ENST00000439120 SEC24BO95487 1268 aa20.57■□□□□ 0.88
AC004540.1-201ENST00000439120 ATP2B1P20020 1258 aa20.57■□□□□ 0.88
AC004540.1-201ENST00000439120 NOMO2Q5JPE7 1267 aa20.57■□□□□ 0.88
AC004540.1-201ENST00000439120 LLGL2Q6P1M3 1020 aa20.57■□□□□ 0.88
AC004540.1-201ENST00000439120 FERMT3Q86UX7 667 aa20.57■□□□□ 0.88
AC004540.1-201ENST00000439120 TMEM87AQ8NBN3 555 aa20.57■□□□□ 0.88
AC004540.1-201ENST00000439120 URGCPQ8TCY9 931 aa20.57■□□□□ 0.88
AC004540.1-201ENST00000439120 USP15Q9Y4E8 981 aaPredicted RBP20.57■□□□□ 0.88
AC004540.1-201ENST00000439120 PCDHB2Q9Y5E7 798 aa20.57■□□□□ 0.88
AC004540.1-201ENST00000439120 C5orf42Q9H799 3197 aa20.56■□□□□ 0.88
AC004540.1-201ENST00000439120 HIDE1A8MVS5 230 aa20.56■□□□□ 0.88
AC004540.1-201ENST00000439120 PRR33A8MZF0 331 aa20.56■□□□□ 0.88
AC004540.1-201ENST00000439120 NT5C1B-RDH14C9J2C7 533 aa20.56■□□□□ 0.88
AC004540.1-201ENST00000439120 ZBTB39O15060 712 aa20.56■□□□□ 0.88
AC004540.1-201ENST00000439120 ZNF623O75123 536 aa20.56■□□□□ 0.88
AC004540.1-201ENST00000439120 TECP42680 631 aa20.56■□□□□ 0.88
AC004540.1-201ENST00000439120 RBM10P98175 930 aaKnown RBP20.56■□□□□ 0.88
AC004540.1-201ENST00000439120 GUCY1B3Q02153 619 aa20.56■□□□□ 0.88
AC004540.1-201ENST00000439120 NCBP1Q09161 790 aaKnown RBP20.56■□□□□ 0.88
AC004540.1-201ENST00000439120 TFDP1Q14186 410 aa20.56■□□□□ 0.88
AC004540.1-201ENST00000439120 MXD4Q14582 209 aaPredicted RBP20.56■□□□□ 0.88
AC004540.1-201ENST00000439120 CCDC83Q8IWF9 413 aa20.56■□□□□ 0.88
AC004540.1-201ENST00000439120 C8orf76Q96K31 380 aa20.56■□□□□ 0.88
AC004540.1-201ENST00000439120 GBP3Q9H0R5 595 aa20.56■□□□□ 0.88
AC004540.1-201ENST00000439120 MCM7P33993 719 aa20.55■□□□□ 0.88
AC004540.1-201ENST00000439120 GNL2Q13823 731 aaKnown RBP20.55■□□□□ 0.88
AC004540.1-201ENST00000439120 VN1R2Q8NFZ6 395 aa20.55■□□□□ 0.88
AC004540.1-201ENST00000439120 MINDY3Q9H8M7 445 aa20.55■□□□□ 0.88
AC004540.1-201ENST00000439120 ANKEF1Q9NU02 776 aa20.55■□□□□ 0.88
AC004540.1-201ENST00000439120 TBC1D13Q9NVG8 400 aa20.55■□□□□ 0.88
AC004540.1-201ENST00000439120 OFD1O75665 1012 aa20.54■□□□□ 0.88
AC004540.1-201ENST00000439120 DGAT1O75907 488 aa20.54■□□□□ 0.88
AC004540.1-201ENST00000439120 LYPLA2O95372 231 aa20.54■□□□□ 0.88
AC004540.1-201ENST00000439120 PCBP1Q15365 356 aaKnown RBP eCLIP20.54■□□□□ 0.88
AC004540.1-201ENST00000439120 RNF135Q8IUD6 432 aa20.54■□□□□ 0.88
AC004540.1-201ENST00000439120 FAM122AQ96E09 287 aa20.54■□□□□ 0.88
AC004540.1-201ENST00000439120 FAM193BQ96PV7 902 aaPredicted RBP20.54■□□□□ 0.88
AC004540.1-201ENST00000439120 HSD17B14Q9BPX1 270 aa20.54■□□□□ 0.88
AC004540.1-201ENST00000439120 LLPHQ9BRT6 129 aaKnown RBP20.54■□□□□ 0.88
AC004540.1-201ENST00000439120 RSAD1Q9HA92 442 aa20.54■□□□□ 0.88
AC004540.1-201ENST00000439120 MEIS3P2A8K0S8 358 aa20.53■□□□□ 0.88
AC004540.1-201ENST00000439120 INO80B-WBP1J3KQ70 363 aa20.53■□□□□ 0.88
AC004540.1-201ENST00000439120 ST3GAL1Q11201 340 aa20.53■□□□□ 0.88
AC004540.1-201ENST00000439120 ANKRD54Q6NXT1 300 aa20.53■□□□□ 0.88
AC004540.1-201ENST00000439120 TMEM184AQ6ZMB5 413 aa20.53■□□□□ 0.88
AC004540.1-201ENST00000439120 VPS52Q8N1B4 723 aa20.53■□□□□ 0.88
AC004540.1-201ENST00000439120 MRPL43Q8N983 215 aaKnown RBP20.53■□□□□ 0.88
AC004540.1-201ENST00000439120 FAM184AQ8NB25 1140 aa20.53■□□□□ 0.88
AC004540.1-201ENST00000439120 CNNM3Q8NE01 707 aa20.53■□□□□ 0.88
AC004540.1-201ENST00000439120 CASP10Q92851 521 aa20.53■□□□□ 0.88
AC004540.1-201ENST00000439120 MTMR9Q96QG7 549 aa20.53■□□□□ 0.88
AC004540.1-201ENST00000439120 PHF7Q9BWX1 381 aaPredicted RBP20.53■□□□□ 0.88
AC004540.1-201ENST00000439120 NRDE2Q9H7Z3 1164 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms