RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 CLUAP1Q96AJ1 413 aa12.91□□□□□ -0.34
RTN4-211ENST00000438462 ZC3H10Q96K80 434 aaKnown RBP12.91□□□□□ -0.34
RTN4-211ENST00000438462 DCBLD2Q96PD2 775 aa12.91□□□□□ -0.34
RTN4-211ENST00000438462 MRPL9Q9BYD2 267 aaKnown RBP12.91□□□□□ -0.34
RTN4-211ENST00000438462 PRKD2Q9BZL6 878 aa12.91□□□□□ -0.34
RTN4-211ENST00000438462 PUS7LQ9H0K6 701 aaKnown RBP12.91□□□□□ -0.34
RTN4-211ENST00000438462 PRORYQ9H606 182 aa12.91□□□□□ -0.34
RTN4-211ENST00000438462 EPB41L4AQ9HCS5 686 aaPredicted RBP12.91□□□□□ -0.34
RTN4-211ENST00000438462 IL17RBQ9NRM6 502 aa12.91□□□□□ -0.34
RTN4-211ENST00000438462 RBM12Q9NTZ6 932 aaKnown RBP12.91□□□□□ -0.34
RTN4-211ENST00000438462 TCP11L1Q9NUJ3 509 aa12.91□□□□□ -0.34
RTN4-211ENST00000438462 MUC22E2RYF6 1773 aaPredicted RBP12.91□□□□□ -0.34
RTN4-211ENST00000438462 DOPEY2Q9Y3R5 2298 aa12.9□□□□□ -0.34
RTN4-211ENST00000438462 ADH1AP07327 375 aa12.9□□□□□ -0.34
RTN4-211ENST00000438462 FAM193AP78312 1265 aa12.9□□□□□ -0.34
RTN4-211ENST00000438462 NTHL1P78549 312 aa12.9□□□□□ -0.34
RTN4-211ENST00000438462 POLA2Q14181 598 aa12.9□□□□□ -0.34
RTN4-211ENST00000438462 DSC3Q14574 896 aa12.9□□□□□ -0.34
RTN4-211ENST00000438462 PGM5Q15124 567 aa12.9□□□□□ -0.34
RTN4-211ENST00000438462 PLK5Q496M5 336 aa12.9□□□□□ -0.34
RTN4-211ENST00000438462 PCSK4Q6UW60 755 aa12.9□□□□□ -0.34
RTN4-211ENST00000438462 FAM43BQ6ZT52 329 aaPredicted RBP12.9□□□□□ -0.34
RTN4-211ENST00000438462 GRASPQ7Z6J2 395 aaPredicted RBP12.9□□□□□ -0.34
RTN4-211ENST00000438462 AACSQ86V21 672 aa12.9□□□□□ -0.34
RTN4-211ENST00000438462 MCF2L2Q86YR7 1114 aa12.9□□□□□ -0.34
RTN4-211ENST00000438462 PLA2G2FQ9BZM2 168 aa12.9□□□□□ -0.34
RTN4-211ENST00000438462 CDHR5Q9HBB8 845 aa12.9□□□□□ -0.34
RTN4-211ENST00000438462 MRPL17Q9NRX2 175 aaKnown RBP12.9□□□□□ -0.34
RTN4-211ENST00000438462 ZDHHC7Q9NXF8 308 aa12.9□□□□□ -0.34
RTN4-211ENST00000438462 DKK4Q9UBT3 224 aa12.9□□□□□ -0.34
RTN4-211ENST00000438462 PDCD11Q14690 1871 aaKnown RBP12.9□□□□□ -0.34
RTN4-211ENST00000438462 KIF26AQ9ULI4 1882 aaPredicted RBP12.9□□□□□ -0.34
RTN4-211ENST00000438462 F5P12259 2224 aa12.9□□□□□ -0.34
RTN4-211ENST00000438462 MYH6P13533 1939 aa12.9□□□□□ -0.35
RTN4-211ENST00000438462 BCLAF3A2AJT9 711 aaKnown RBP12.89□□□□□ -0.35
RTN4-211ENST00000438462 PATE3B3GLJ2 98 aa12.89□□□□□ -0.35
RTN4-211ENST00000438462 KHNYNO15037 678 aaKnown RBP12.89□□□□□ -0.35
RTN4-211ENST00000438462 GPR182O15218 404 aa12.89□□□□□ -0.35
RTN4-211ENST00000438462 TEX28O15482 410 aa12.89□□□□□ -0.35
RTN4-211ENST00000438462 GNAI2P04899 355 aa12.89□□□□□ -0.35
RTN4-211ENST00000438462 TCF7P36402 384 aaPredicted RBP12.89□□□□□ -0.35
RTN4-211ENST00000438462 TDO2P48775 406 aa12.89□□□□□ -0.35
RTN4-211ENST00000438462 AK2P54819 239 aa12.89□□□□□ -0.35
RTN4-211ENST00000438462 NEDD9Q14511 834 aa12.89□□□□□ -0.35
RTN4-211ENST00000438462 ODR4Q5SWX8 454 aa12.89□□□□□ -0.35
RTN4-211ENST00000438462 GIMAP6Q6P9H5 292 aa12.89□□□□□ -0.35
RTN4-211ENST00000438462 PIP4P1Q86T03 277 aa12.89□□□□□ -0.35
RTN4-211ENST00000438462 VSIG10LQ86VR7 867 aa12.89□□□□□ -0.35
RTN4-211ENST00000438462 FAM228AQ86W67 206 aa12.89□□□□□ -0.35
RTN4-211ENST00000438462 FCRL3Q96P31 734 aaPredicted RBP12.89□□□□□ -0.35
RTN4-211ENST00000438462 DUSP15Q9H1R2 295 aaPredicted RBP12.89□□□□□ -0.35
RTN4-211ENST00000438462 ERAP1Q9NZ08 941 aa12.89□□□□□ -0.35
RTN4-211ENST00000438462 FBN2P35556 2912 aa12.89□□□□□ -0.35
RTN4-211ENST00000438462 ATMQ13315 3056 aa12.89□□□□□ -0.35
RTN4-211ENST00000438462 AKAP3O75969 853 aa12.88□□□□□ -0.35
RTN4-211ENST00000438462 CFBP00751 764 aa12.88□□□□□ -0.35
RTN4-211ENST00000438462 ECHDC2Q86YB7 292 aa12.88□□□□□ -0.35
RTN4-211ENST00000438462 TRAPPC12Q8WVT3 735 aa12.88□□□□□ -0.35
RTN4-211ENST00000438462 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.88□□□□□ -0.35
RTN4-211ENST00000438462 PIAS3Q9Y6X2 628 aa12.88□□□□□ -0.35
RTN4-211ENST00000438462 COL6A6A6NMZ7 2263 aa12.88□□□□□ -0.35
RTN4-211ENST00000438462 C2CD3Q4AC94 2353 aa12.87□□□□□ -0.35
RTN4-211ENST00000438462 ZMYM2Q9UBW7 1377 aa12.87□□□□□ -0.35
RTN4-211ENST00000438462 TSPY2A6NKD2 308 aa12.87□□□□□ -0.35
RTN4-211ENST00000438462 SLC28A2O43868 658 aa12.87□□□□□ -0.35
RTN4-211ENST00000438462 ECI2O75521 394 aa12.87□□□□□ -0.35
RTN4-211ENST00000438462 URODP06132 367 aa12.87□□□□□ -0.35
RTN4-211ENST00000438462 GALTP07902 379 aa12.87□□□□□ -0.35
RTN4-211ENST00000438462 INSRRP14616 1297 aa12.87□□□□□ -0.35
RTN4-211ENST00000438462 CCND2P30279 289 aa12.87□□□□□ -0.35
RTN4-211ENST00000438462 CSRP3P50461 194 aa12.87□□□□□ -0.35
RTN4-211ENST00000438462 LRRC32Q14392 662 aa12.87□□□□□ -0.35
RTN4-211ENST00000438462 UBE3CQ15386 1083 aa12.87□□□□□ -0.35
RTN4-211ENST00000438462 ELF2Q15723 593 aa12.87□□□□□ -0.35
RTN4-211ENST00000438462 CDC37Q16543 378 aaPredicted RBP12.87□□□□□ -0.35
RTN4-211ENST00000438462 ITFG1Q8TB96 612 aa12.87□□□□□ -0.35
RTN4-211ENST00000438462 STRBPQ96SI9 672 aaKnown RBP12.87□□□□□ -0.35
RTN4-211ENST00000438462 PAG1Q9NWQ8 432 aa12.87□□□□□ -0.35
RTN4-211ENST00000438462 PCDHA2Q9Y5H9 948 aa12.87□□□□□ -0.35
RTN4-211ENST00000438462 PCDHA1Q9Y5I3 950 aa12.87□□□□□ -0.35
RTN4-211ENST00000438462 PTPRBP23467 1997 aa12.87□□□□□ -0.35
RTN4-211ENST00000438462 RRN3P2A6NIE6 340 aa12.86□□□□□ -0.35
RTN4-211ENST00000438462 PDHBP11177 359 aa12.86□□□□□ -0.35
RTN4-211ENST00000438462 ITPKBP27987 946 aa12.86□□□□□ -0.35
RTN4-211ENST00000438462 MAPK8P45983 427 aa12.86□□□□□ -0.35
RTN4-211ENST00000438462 SEMA3FQ13275 785 aa12.86□□□□□ -0.35
RTN4-211ENST00000438462 GRM2Q14416 872 aa12.86□□□□□ -0.35
RTN4-211ENST00000438462 ZNF280BQ86YH2 543 aa12.86□□□□□ -0.35
RTN4-211ENST00000438462 NPAS3Q8IXF0 933 aa12.86□□□□□ -0.35
RTN4-211ENST00000438462 HDAC7Q8WUI4 952 aa12.86□□□□□ -0.35
RTN4-211ENST00000438462 RPS6KC1Q96S38 1066 aa12.86□□□□□ -0.35
RTN4-211ENST00000438462 PPP1R16BQ96T49 567 aa12.86□□□□□ -0.35
RTN4-211ENST00000438462 CPVLQ9H3G5 476 aa12.86□□□□□ -0.35
RTN4-211ENST00000438462 PLEKHA4Q9H4M7 779 aa12.86□□□□□ -0.35
RTN4-211ENST00000438462 NRDE2Q9H7Z3 1164 aa12.86□□□□□ -0.35
RTN4-211ENST00000438462 ANKMY1Q9P2S6 941 aa12.86□□□□□ -0.35
RTN4-211ENST00000438462 DNMT3LQ9UJW3 386 aa12.86□□□□□ -0.35
RTN4-211ENST00000438462 NOB1Q9ULX3 412 aaKnown RBP12.86□□□□□ -0.35
RTN4-211ENST00000438462 SMIM35A0A1B0GVV1 85 aa12.85□□□□□ -0.35
RTN4-211ENST00000438462 FAM205CA6NFA0 338 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms