RNA–Protein interactions for RNA: ENST00000438412.5

HCG18-236, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 2,440 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-236ENST00000438412 DDX47Q9H0S4 455 aaKnown RBP13.79□□□□□ -0.2
HCG18-236ENST00000438412 COG5Q9UP83 839 aa13.79□□□□□ -0.2
HCG18-236ENST00000438412 PARP14Q460N5 1801 aa13.79□□□□□ -0.2
HCG18-236ENST00000438412 PFASO15067 1338 aa13.79□□□□□ -0.2
HCG18-236ENST00000438412 BUB1BO60566 1050 aaPredicted RBP13.79□□□□□ -0.2
HCG18-236ENST00000438412 CTNND1O60716 968 aaKnown RBP13.79□□□□□ -0.2
HCG18-236ENST00000438412 H2AFZP0C0S5 128 aa13.79□□□□□ -0.2
HCG18-236ENST00000438412 PLS3P13797 630 aa13.79□□□□□ -0.2
HCG18-236ENST00000438412 ZNF280AP59817 542 aaPredicted RBP13.79□□□□□ -0.2
HCG18-236ENST00000438412 RPS6KA1Q15418 735 aa13.79□□□□□ -0.2
HCG18-236ENST00000438412 LMBRD2Q68DH5 695 aaPredicted RBP13.79□□□□□ -0.2
HCG18-236ENST00000438412 ARHGAP27Q6ZUM4 889 aa13.79□□□□□ -0.2
HCG18-236ENST00000438412 H2AFVQ71UI9 128 aa13.79□□□□□ -0.2
HCG18-236ENST00000438412 SLC30A5Q8TAD4 765 aa13.79□□□□□ -0.2
HCG18-236ENST00000438412 CASKIN2Q8WXE0 1202 aa13.79□□□□□ -0.2
HCG18-236ENST00000438412 LPAR1Q92633 364 aa13.79□□□□□ -0.2
HCG18-236ENST00000438412 R3HDMLQ9H3Y0 253 aa13.79□□□□□ -0.2
HCG18-236ENST00000438412 RLFQ13129 1914 aa13.78□□□□□ -0.2
HCG18-236ENST00000438412 ZBTB48P10074 688 aaPredicted RBP13.78□□□□□ -0.2
HCG18-236ENST00000438412 BCRP11274 1271 aa13.78□□□□□ -0.2
HCG18-236ENST00000438412 BACE1P56817 501 aa13.78□□□□□ -0.2
HCG18-236ENST00000438412 TUBB4BP68371 445 aa13.78□□□□□ -0.2
HCG18-236ENST00000438412 ZNF211Q13398 564 aaPredicted RBP13.78□□□□□ -0.2
HCG18-236ENST00000438412 TMEM132BQ14DG7 1078 aa13.78□□□□□ -0.2
HCG18-236ENST00000438412 HSP90B2PQ58FF3 399 aa13.78□□□□□ -0.2
HCG18-236ENST00000438412 MCF2L2Q86YR7 1114 aa13.78□□□□□ -0.2
HCG18-236ENST00000438412 SLC35G2Q8TBE7 412 aa13.78□□□□□ -0.2
HCG18-236ENST00000438412 SEMA4DQ92854 862 aa13.78□□□□□ -0.2
HCG18-236ENST00000438412 STK33Q9BYT3 514 aa13.78□□□□□ -0.2
HCG18-236ENST00000438412 LUC7LQ9NQ29 371 aaKnown RBP13.78□□□□□ -0.2
HCG18-236ENST00000438412 LARSQ9P2J5 1176 aaKnown RBP13.78□□□□□ -0.2
HCG18-236ENST00000438412 GABBR1Q9UBS5 961 aa13.78□□□□□ -0.2
HCG18-236ENST00000438412 SEL1LQ9UBV2 794 aa13.78□□□□□ -0.2
HCG18-236ENST00000438412 TCEAL9Q9UHQ7 104 aa13.78□□□□□ -0.2
HCG18-236ENST00000438412 PTPRAP18433 802 aa13.78□□□□□ -0.2
HCG18-236ENST00000438412 VAMP7P51809 220 aa13.78□□□□□ -0.2
HCG18-236ENST00000438412 MKRN4PQ13434 485 aaPredicted RBP13.78□□□□□ -0.2
HCG18-236ENST00000438412 DCAF12L1Q5VU92 463 aa13.78□□□□□ -0.2
HCG18-236ENST00000438412 USP38Q8NB14 1042 aa13.78□□□□□ -0.2
HCG18-236ENST00000438412 NLGN2Q8NFZ4 835 aa13.78□□□□□ -0.2
HCG18-236ENST00000438412 DHX38Q92620 1227 aaKnown RBP13.78□□□□□ -0.2
HCG18-236ENST00000438412 SYT11Q9BT88 431 aa13.78□□□□□ -0.2
HCG18-236ENST00000438412 CELF4Q9BZC1 486 aaKnown RBP13.78□□□□□ -0.2
HCG18-236ENST00000438412 GTPBP10A4D1E9 387 aaKnown RBP13.77□□□□□ -0.21
HCG18-236ENST00000438412 TMEM110-MUSTN1A8MSY1 372 aa13.77□□□□□ -0.21
HCG18-236ENST00000438412 KRT14P02533 472 aa13.77□□□□□ -0.21
HCG18-236ENST00000438412 NR3C2P08235 984 aa13.77□□□□□ -0.21
HCG18-236ENST00000438412 MARCKSL1P49006 195 aa13.77□□□□□ -0.21
HCG18-236ENST00000438412 TNIP1Q15025 636 aa13.77□□□□□ -0.21
HCG18-236ENST00000438412 SCARA3Q6AZY7 606 aa13.77□□□□□ -0.21
HCG18-236ENST00000438412 SLC39A4Q6P5W5 647 aa13.77□□□□□ -0.21
HCG18-236ENST00000438412 CYFIP1Q7L576 1253 aa13.77□□□□□ -0.21
HCG18-236ENST00000438412 PEX26Q7Z412 305 aa13.77□□□□□ -0.21
HCG18-236ENST00000438412 BTBD6Q96KE9 485 aa13.77□□□□□ -0.21
HCG18-236ENST00000438412 PI4K2AQ9BTU6 479 aa13.77□□□□□ -0.21
HCG18-236ENST00000438412 TMEM117Q9H0C3 514 aa13.77□□□□□ -0.21
HCG18-236ENST00000438412 ZNF214Q9UL59 606 aaPredicted RBP13.77□□□□□ -0.21
HCG18-236ENST00000438412 NOC2LQ9Y3T9 749 aaKnown RBP13.77□□□□□ -0.21
HCG18-236ENST00000438412 GOLGA6BA6NDN3 693 aa13.76□□□□□ -0.21
HCG18-236ENST00000438412 FERP16591 822 aa13.76□□□□□ -0.21
HCG18-236ENST00000438412 CAPN2P17655 700 aa13.76□□□□□ -0.21
HCG18-236ENST00000438412 NPTX2P47972 431 aa13.76□□□□□ -0.21
HCG18-236ENST00000438412 SP2Q02086 613 aa13.76□□□□□ -0.21
HCG18-236ENST00000438412 TNFAIP1Q13829 316 aa13.76□□□□□ -0.21
HCG18-236ENST00000438412 MAP9Q49MG5 647 aa13.76□□□□□ -0.21
HCG18-236ENST00000438412 EPC2Q52LR7 807 aa13.76□□□□□ -0.21
HCG18-236ENST00000438412 KCTD16Q68DU8 428 aa13.76□□□□□ -0.21
HCG18-236ENST00000438412 SWSAP1Q6NVH7 229 aa13.76□□□□□ -0.21
HCG18-236ENST00000438412 SLC47A2Q86VL8 602 aa13.76□□□□□ -0.21
HCG18-236ENST00000438412 CCDC60Q8IWA6 550 aaPredicted RBP13.76□□□□□ -0.21
HCG18-236ENST00000438412 SH2D3CQ8N5H7 860 aa13.76□□□□□ -0.21
HCG18-236ENST00000438412 ARL8AQ96BM9 186 aa13.76□□□□□ -0.21
HCG18-236ENST00000438412 MKNK1Q9BUB5 465 aa13.76□□□□□ -0.21
HCG18-236ENST00000438412 NEUROG2Q9H2A3 272 aa13.76□□□□□ -0.21
HCG18-236ENST00000438412 TMOD4Q9NZQ9 345 aa13.76□□□□□ -0.21
HCG18-236ENST00000438412 BRCA1P38398 1863 aaKnown RBP13.76□□□□□ -0.21
HCG18-236ENST00000438412 DENND3A2RUS2 1198 aa13.76□□□□□ -0.21
HCG18-236ENST00000438412 ZBED4O75132 1171 aa13.76□□□□□ -0.21
HCG18-236ENST00000438412 SGPL1O95470 568 aa13.76□□□□□ -0.21
HCG18-236ENST00000438412 WNT7BP56706 349 aa13.76□□□□□ -0.21
HCG18-236ENST00000438412 ERVK-9P63128 1117 aa13.76□□□□□ -0.21
HCG18-236ENST00000438412 GPS2Q13227 327 aa13.76□□□□□ -0.21
HCG18-236ENST00000438412 PRPF4BQ13523 1007 aaKnown RBP13.76□□□□□ -0.21
HCG18-236ENST00000438412 PHLDB2Q86SQ0 1253 aa13.76□□□□□ -0.21
HCG18-236ENST00000438412 NT5DC3Q86UY8 548 aa13.76□□□□□ -0.21
HCG18-236ENST00000438412 ZNF280CQ8ND82 737 aa13.76□□□□□ -0.21
HCG18-236ENST00000438412 REPS2Q8NFH8 660 aa13.76□□□□□ -0.21
HCG18-236ENST00000438412 FAM71BQ8TC56 605 aa13.76□□□□□ -0.21
HCG18-236ENST00000438412 KREMEN1Q96MU8 473 aa13.76□□□□□ -0.21
HCG18-236ENST00000438412 PCDHB18PQ96TA0 734 aa13.76□□□□□ -0.21
HCG18-236ENST00000438412 GGA3Q9NZ52 723 aa13.76□□□□□ -0.21
HCG18-236ENST00000438412 KCND2Q9NZV8 630 aa13.76□□□□□ -0.21
HCG18-236ENST00000438412 FBXL5Q9UKA1 691 aa13.76□□□□□ -0.21
HCG18-236ENST00000438412 BZW2Q9Y6E2 419 aaKnown RBP13.76□□□□□ -0.21
HCG18-236ENST00000438412 ZNFX1Q9P2E3 1918 aaKnown RBP13.76□□□□□ -0.21
HCG18-236ENST00000438412 DLATP10515 647 aaKnown RBP13.75□□□□□ -0.21
HCG18-236ENST00000438412 KRT13P13646 458 aa13.75□□□□□ -0.21
HCG18-236ENST00000438412 SSTR3P32745 418 aaPredicted RBP13.75□□□□□ -0.21
HCG18-236ENST00000438412 AARSP49588 968 aaKnown RBP eCLIP13.75□□□□□ -0.21
HCG18-236ENST00000438412 PSMC5P62195 406 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms