RNA–Protein interactions for RNA: ENST00000437983.2

SMAD9-IT1-201, SMAD9 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SMAD9-IT1, Length 504 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-IT1-201ENST00000437983 GPR32O75388 356 aa14.07□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 VTNP04004 478 aa14.07□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 FAM43BQ6ZT52 329 aaPredicted RBP14.07□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 ZNF598Q86UK7 904 aaKnown RBP14.07□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 CMASQ8NFW8 434 aaPredicted RBP14.07□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 PIBF1Q8WXW3 757 aa14.07□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 STAMQ92783 540 aa14.07□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 RNF41Q9H4P4 317 aaPredicted RBP14.07□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 ZSWIM5Q9P217 1185 aa14.07□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 ZMYM6O95789 1325 aa14.07□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 PALM3A6NDB9 673 aaPredicted RBP14.06□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 INPPL1O15357 1258 aa14.06□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 LILRB3O75022 631 aa14.06□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 CLCN1P35523 988 aa14.06□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 STAT5BP51692 787 aa14.06□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 MLF2Q15773 248 aaPredicted RBP14.06□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 SLC44A4Q53GD3 710 aa14.06□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 CCDC178Q5BJE1 867 aa14.06□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 LRSAM1Q6UWE0 723 aa14.06□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 UNQ6494/PRO21346Q6UXR6 183 aa14.06□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 GET4Q7L5D6 327 aaPredicted RBP14.06□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 SMARCC2Q8TAQ2 1214 aa14.06□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 FGF14Q92915 247 aa14.06□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 ZNF707Q96C28 371 aaPredicted RBP14.06□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 RIOX1Q9H6W3 641 aa14.06□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 DCTPP1Q9H773 170 aa14.06□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 LTB4R2Q9NPC1 389 aa14.06□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 EVPLQ92817 2033 aa14.05□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 WDFY3Q8IZQ1 3526 aa14.05□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 MEIS2O14770 477 aa14.05□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 B4GALT3O60512 393 aa14.05□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 GALTP07902 379 aa14.05□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 RETP07949 1114 aa14.05□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 TARSP26639 723 aaKnown RBP14.05□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 MTMR1Q13613 665 aa14.05□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 LONRF3Q496Y0 759 aa14.05□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 MCMDC2Q4G0Z9 681 aa14.05□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 LAIR1Q6GTX8 287 aa14.05□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 PARM1Q6UWI2 310 aa14.05□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 PRR23BQ6ZRT6 265 aa14.05□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 PLPPR4Q7Z2D5 763 aa14.05□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 SMG7Q92540 1137 aaKnown RBP14.05□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 TNPO1Q92973 898 aaKnown RBP14.05□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 EMILIN2Q9BXX0 1053 aa14.05□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 NRDE2Q9H7Z3 1164 aa14.05□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 JPH1Q9HDC5 661 aaPredicted RBP14.05□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 PRMT8Q9NR22 394 aaPredicted RBP14.05□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 DNAJB4Q9UDY4 337 aa14.05□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 RAB23Q9ULC3 237 aa14.05□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 UBIAD1Q9Y5Z9 338 aa14.05□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 PNMA6FA0A0J9YX94 578 aa14.04□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 ZBTB42B2RXF5 422 aa14.04□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 TM4SF5O14894 197 aa14.04□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 SPATA31D3P0C874 917 aa14.04□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 TDGF1P13385 188 aa14.04□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 ZSCAN20P17040 1043 aaPredicted RBP14.04□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 FGFR4P22455 802 aa14.04□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 SLC11A1P49279 550 aa14.04□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 ACTR2P61160 394 aa14.04□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 RING1Q06587 406 aa14.04□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 FZD5Q13467 585 aa14.04□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 CSRP2Q16527 193 aa14.04□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 SPATA31D4Q6ZUB0 917 aa14.04□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 KDF1Q8NAX2 398 aaPredicted RBP14.04□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 MAP4K1Q92918 833 aa14.04□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 CLDN23Q96B33 292 aa14.04□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 CDHR1Q96JP9 859 aa14.04□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 ZNF668Q96K58 619 aaPredicted RBP14.04□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 PCMTD1Q96MG8 357 aaPredicted RBP14.04□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 MYL10Q9BUA6 226 aa14.04□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 MRPL9Q9BYD2 267 aaKnown RBP14.04□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 OSBPL6Q9BZF3 934 aa14.04□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.04□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 SLC9A2Q9UBY0 812 aa14.04□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 NBEAQ8NFP9 2946 aa14.03□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 A0A0U1RQF3 1178 aa14.03□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 C2CD2LO14523 706 aa14.03□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 PRKCQQ04759 706 aa14.03□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 MTAPQ13126 283 aa14.03□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 ZBTB41Q5SVQ8 909 aa14.03□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 IFIT1BQ5T764 474 aaKnown RBP14.03□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 IL31Q6EBC2 164 aa14.03□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 DDX1Q92499 740 aaKnown RBP14.03□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 LPPQ93052 612 aa14.03□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 GBP3Q9H0R5 595 aa14.03□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.03□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 LHX6Q9UPM6 363 aa14.03□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 MYH15Q9Y2K3 1946 aa14.03□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 DSPP15924 2871 aaKnown RBP14.03□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 SMG1Q96Q15 3661 aaKnown RBP14.03□□□□□ -0.16
SMAD9-IT1-201ENST00000437983 SRRM3A6NNA2 597 aaPredicted RBP14.02□□□□□ -0.17
SMAD9-IT1-201ENST00000437983 MEIS3P2A8K0S8 358 aa14.02□□□□□ -0.17
SMAD9-IT1-201ENST00000437983 ZNF213O14771 459 aa14.02□□□□□ -0.17
SMAD9-IT1-201ENST00000437983 LRP3O75074 770 aa14.02□□□□□ -0.17
SMAD9-IT1-201ENST00000437983 TRAF1Q13077 416 aa14.02□□□□□ -0.17
SMAD9-IT1-201ENST00000437983 NMIQ13287 307 aaPredicted RBP14.02□□□□□ -0.17
SMAD9-IT1-201ENST00000437983 CELF5Q8N6W0 485 aaKnown RBP14.02□□□□□ -0.17
SMAD9-IT1-201ENST00000437983 RHOBTB2Q9BYZ6 727 aa14.02□□□□□ -0.17
SMAD9-IT1-201ENST00000437983 JADE2Q9NQC1 790 aa14.02□□□□□ -0.17
SMAD9-IT1-201ENST00000437983 RXFP3Q9NSD7 469 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms