RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 DRAP1Q14919 205 aaPredicted RBP10.31□□□□□ -0.76
CUX1-206ENST00000437600 UGCGQ16739 394 aa10.31□□□□□ -0.76
CUX1-206ENST00000437600 C8orf74Q6P047 294 aa10.31□□□□□ -0.76
CUX1-206ENST00000437600 PADI6Q6TGC4 694 aa10.31□□□□□ -0.76
CUX1-206ENST00000437600 GBP6Q6ZN66 633 aa10.31□□□□□ -0.76
CUX1-206ENST00000437600 ZNF662Q6ZS27 426 aa10.31□□□□□ -0.76
CUX1-206ENST00000437600 FRMD5Q7Z6J6 570 aa10.31□□□□□ -0.76
CUX1-206ENST00000437600 CCDC127Q96BQ5 260 aa10.31□□□□□ -0.76
CUX1-206ENST00000437600 PDCD2LQ9BRP1 358 aa10.31□□□□□ -0.76
CUX1-206ENST00000437600 AS3MTQ9HBK9 375 aa10.31□□□□□ -0.76
CUX1-206ENST00000437600 DNAJC12Q9UKB3 198 aa10.31□□□□□ -0.76
CUX1-206ENST00000437600 ZNF214Q9UL59 606 aaPredicted RBP10.31□□□□□ -0.76
CUX1-206ENST00000437600 FAM184BQ9ULE4 1060 aa10.31□□□□□ -0.76
CUX1-206ENST00000437600 PARP14Q460N5 1801 aa10.3□□□□□ -0.76
CUX1-206ENST00000437600 LAMA2P24043 3122 aaKnown RBP10.3□□□□□ -0.76
CUX1-206ENST00000437600 ZMYM2Q9UBW7 1377 aa10.3□□□□□ -0.76
CUX1-206ENST00000437600 RLFQ13129 1914 aa10.3□□□□□ -0.76
CUX1-206ENST00000437600 ITGA4P13612 1032 aa10.3□□□□□ -0.76
CUX1-206ENST00000437600 RPL13P26373 211 aaKnown RBP10.3□□□□□ -0.76
CUX1-206ENST00000437600 GPS2Q13227 327 aa10.3□□□□□ -0.76
CUX1-206ENST00000437600 PPP2R5CQ13362 524 aa10.3□□□□□ -0.76
CUX1-206ENST00000437600 PRPF4BQ13523 1007 aaKnown RBP10.3□□□□□ -0.76
CUX1-206ENST00000437600 TMEM132AQ24JP5 1023 aa10.3□□□□□ -0.76
CUX1-206ENST00000437600 CST9Q5W186 159 aa10.3□□□□□ -0.76
CUX1-206ENST00000437600 PHLDB3Q6NSJ2 640 aa10.3□□□□□ -0.76
CUX1-206ENST00000437600 EEPD1Q7L9B9 569 aa10.3□□□□□ -0.76
CUX1-206ENST00000437600 ANKRD13AQ8IZ07 590 aa10.3□□□□□ -0.76
CUX1-206ENST00000437600 PAGR1Q9BTK6 254 aa10.3□□□□□ -0.76
CUX1-206ENST00000437600 AGPAT3Q9NRZ7 376 aa10.3□□□□□ -0.76
CUX1-206ENST00000437600 TMOD4Q9NZQ9 345 aa10.3□□□□□ -0.76
CUX1-206ENST00000437600 K7ENM7 598 aa10.3□□□□□ -0.76
CUX1-206ENST00000437600 FOXN3O00409 490 aaPredicted RBP10.3□□□□□ -0.76
CUX1-206ENST00000437600 SLC16A4O15374 487 aa10.3□□□□□ -0.76
CUX1-206ENST00000437600 DHX15O43143 795 aaKnown RBP10.3□□□□□ -0.76
CUX1-206ENST00000437600 PJA2O43164 708 aa10.3□□□□□ -0.76
CUX1-206ENST00000437600 EIF3JO75822 258 aaKnown RBP10.3□□□□□ -0.76
CUX1-206ENST00000437600 TCP1P17987 556 aaKnown RBP10.3□□□□□ -0.76
CUX1-206ENST00000437600 PSMC2P35998 433 aaKnown RBP10.3□□□□□ -0.76
CUX1-206ENST00000437600 MARSP56192 900 aaKnown RBP10.3□□□□□ -0.76
CUX1-206ENST00000437600 CNTN2Q02246 1040 aa10.3□□□□□ -0.76
CUX1-206ENST00000437600 CFAP221Q4G0U5 840 aa10.3□□□□□ -0.76
CUX1-206ENST00000437600 AADACL2Q6P093 401 aa10.3□□□□□ -0.76
CUX1-206ENST00000437600 PHLDB2Q86SQ0 1253 aa10.3□□□□□ -0.76
CUX1-206ENST00000437600 MCF2L2Q86YR7 1114 aa10.3□□□□□ -0.76
CUX1-206ENST00000437600 NACC1Q96RE7 527 aa10.3□□□□□ -0.76
CUX1-206ENST00000437600 TRIM31Q9BZY9 425 aa10.3□□□□□ -0.76
CUX1-206ENST00000437600 GBP3Q9H0R5 595 aa10.3□□□□□ -0.76
CUX1-206ENST00000437600 PXMP2Q9NR77 195 aa10.3□□□□□ -0.76
CUX1-206ENST00000437600 TCEAL9Q9UHQ7 104 aa10.3□□□□□ -0.76
CUX1-206ENST00000437600 NR2E1Q9Y466 385 aa10.3□□□□□ -0.76
CUX1-206ENST00000437600 PAPPA2Q9BXP8 1791 aa10.29□□□□□ -0.76
CUX1-206ENST00000437600 SPDYE16A6NNV3 312 aaPredicted RBP10.29□□□□□ -0.76
CUX1-206ENST00000437600 HEXIM1O94992 359 aaKnown RBP10.29□□□□□ -0.76
CUX1-206ENST00000437600 PEX3P56589 373 aa10.29□□□□□ -0.76
CUX1-206ENST00000437600 ZSCAN26Q16670 478 aa10.29□□□□□ -0.76
CUX1-206ENST00000437600 DAAM2Q86T65 1068 aa10.29□□□□□ -0.76
CUX1-206ENST00000437600 SH2D3CQ8N5H7 860 aa10.29□□□□□ -0.76
CUX1-206ENST00000437600 SAAL1Q96ER3 474 aa10.29□□□□□ -0.76
CUX1-206ENST00000437600 DDX47Q9H0S4 455 aaKnown RBP10.29□□□□□ -0.76
CUX1-206ENST00000437600 AGO4Q9HCK5 861 aaKnown RBP10.29□□□□□ -0.76
CUX1-206ENST00000437600 A1CFQ9NQ94 594 aaKnown RBP10.29□□□□□ -0.76
CUX1-206ENST00000437600 CCNE2O96020 404 aa10.29□□□□□ -0.76
CUX1-206ENST00000437600 DSG3P32926 999 aa10.29□□□□□ -0.76
CUX1-206ENST00000437600 FMO5P49326 533 aa10.29□□□□□ -0.76
CUX1-206ENST00000437600 GALCP54803 685 aa10.29□□□□□ -0.76
CUX1-206ENST00000437600 ZNF211Q13398 564 aaPredicted RBP10.29□□□□□ -0.76
CUX1-206ENST00000437600 SLC20A1Q8WUM9 679 aa10.29□□□□□ -0.76
CUX1-206ENST00000437600 ARL8AQ96BM9 186 aa10.29□□□□□ -0.76
CUX1-206ENST00000437600 BORCS6Q96GS4 357 aa10.29□□□□□ -0.76
CUX1-206ENST00000437600 CENPHQ9H3R5 247 aa10.29□□□□□ -0.76
CUX1-206ENST00000437600 UBE2TQ9NPD8 197 aaPredicted RBP10.29□□□□□ -0.76
CUX1-206ENST00000437600 LCMT1Q9UIC8 334 aa10.29□□□□□ -0.76
CUX1-206ENST00000437600 CCDC169A6NNP5 214 aa10.28□□□□□ -0.76
CUX1-206ENST00000437600 TMEM110-MUSTN1A8MSY1 372 aa10.28□□□□□ -0.76
CUX1-206ENST00000437600 NR3C2P08235 984 aa10.28□□□□□ -0.76
CUX1-206ENST00000437600 SETQ01105 290 aaPredicted RBP10.28□□□□□ -0.76
CUX1-206ENST00000437600 PPP3CAQ08209 521 aa10.28□□□□□ -0.76
CUX1-206ENST00000437600 RPS6KA1Q15418 735 aa10.28□□□□□ -0.76
CUX1-206ENST00000437600 MEI1Q5TIA1 1274 aa10.28□□□□□ -0.76
CUX1-206ENST00000437600 HS2ST1Q7LGA3 356 aa10.28□□□□□ -0.76
CUX1-206ENST00000437600 LNX1Q8TBB1 728 aaPredicted RBP10.28□□□□□ -0.76
CUX1-206ENST00000437600 CELF4Q9BZC1 486 aaKnown RBP10.28□□□□□ -0.76
CUX1-206ENST00000437600 GPBP1L1Q9HC44 474 aaPredicted RBP10.28□□□□□ -0.76
CUX1-206ENST00000437600 STIM2Q9P246 746 aa10.28□□□□□ -0.76
CUX1-206ENST00000437600 RSPH14Q9UHP6 348 aa10.28□□□□□ -0.76
CUX1-206ENST00000437600 FRMD4BQ9Y2L6 1034 aa10.28□□□□□ -0.76
CUX1-206ENST00000437600 IGSF9BQ9UPX0 1349 aa10.28□□□□□ -0.76
CUX1-206ENST00000437600 GOLGA6BA6NDN3 693 aa10.28□□□□□ -0.76
CUX1-206ENST00000437600 RAD51CO43502 376 aa10.28□□□□□ -0.76
CUX1-206ENST00000437600 MAPK7Q13164 816 aa10.28□□□□□ -0.76
CUX1-206ENST00000437600 EPC2Q52LR7 807 aa10.28□□□□□ -0.76
CUX1-206ENST00000437600 FAM102BQ5T8I3 360 aa10.28□□□□□ -0.76
CUX1-206ENST00000437600 WDR78Q5VTH9 848 aa10.28□□□□□ -0.76
CUX1-206ENST00000437600 PCNX4Q63HM2 1172 aa10.28□□□□□ -0.76
CUX1-206ENST00000437600 PPP4R3CPQ6ZMV5 832 aa10.28□□□□□ -0.76
CUX1-206ENST00000437600 CATSPERGQ6ZRH7 1159 aa10.28□□□□□ -0.76
CUX1-206ENST00000437600 ARMC9Q7Z3E5 817 aa10.28□□□□□ -0.76
CUX1-206ENST00000437600 CPNE8Q86YQ8 564 aa10.28□□□□□ -0.76
CUX1-206ENST00000437600 METTL13Q8N6R0 699 aa10.28□□□□□ -0.76
CUX1-206ENST00000437600 REPS2Q8NFH8 660 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms