RNA–Protein interactions for RNA: ENST00000437003.3

TMEM116-202, Transcript of transmembrane protein 116, humanhuman

Gene TMEM116, Length 2,761 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-202ENST00000437003 ZNF268Q14587 947 aaPredicted RBP13.36□□□□□ -0.27
TMEM116-202ENST00000437003 USH1GQ495M9 461 aa13.36□□□□□ -0.27
TMEM116-202ENST00000437003 CDCA2Q69YH5 1023 aaPredicted RBP13.36□□□□□ -0.27
TMEM116-202ENST00000437003 HHIPL2Q6UWX4 724 aa13.36□□□□□ -0.27
TMEM116-202ENST00000437003 SPDYE1Q8NFV5 336 aaPredicted RBP13.36□□□□□ -0.27
TMEM116-202ENST00000437003 NEK9Q8TD19 979 aa13.36□□□□□ -0.27
TMEM116-202ENST00000437003 CCHCR1Q8TD31 782 aa13.36□□□□□ -0.27
TMEM116-202ENST00000437003 DYDC1Q8WWB3 177 aa13.36□□□□□ -0.27
TMEM116-202ENST00000437003 ARHGEF10LQ9HCE6 1279 aa13.36□□□□□ -0.27
TMEM116-202ENST00000437003 KDM3AQ9Y4C1 1321 aa13.36□□□□□ -0.27
TMEM116-202ENST00000437003 BHMG1C9JSJ3 638 aaPredicted RBP13.36□□□□□ -0.27
TMEM116-202ENST00000437003 ONECUT3O60422 494 aaPredicted RBP13.36□□□□□ -0.27
TMEM116-202ENST00000437003 SMNDC1O75940 238 aaKnown RBP eCLIP13.36□□□□□ -0.27
TMEM116-202ENST00000437003 HOXA7P31268 230 aaPredicted RBP13.36□□□□□ -0.27
TMEM116-202ENST00000437003 IKQ13123 557 aaPredicted RBP13.36□□□□□ -0.27
TMEM116-202ENST00000437003 ZNF211Q13398 564 aaPredicted RBP13.36□□□□□ -0.27
TMEM116-202ENST00000437003 IFI16Q16666 785 aaKnown RBP13.36□□□□□ -0.27
TMEM116-202ENST00000437003 QRICH1Q2TAL8 776 aa13.36□□□□□ -0.27
TMEM116-202ENST00000437003 TRIM68Q6AZZ1 485 aa13.36□□□□□ -0.27
TMEM116-202ENST00000437003 MIS18BP1Q6P0N0 1132 aa13.36□□□□□ -0.27
TMEM116-202ENST00000437003 OTUD6AQ7L8S5 288 aa13.36□□□□□ -0.27
TMEM116-202ENST00000437003 FBXO25Q8TCJ0 367 aa13.36□□□□□ -0.27
TMEM116-202ENST00000437003 CCDC17Q96LX7 622 aa13.36□□□□□ -0.27
TMEM116-202ENST00000437003 TMX4Q9H1E5 349 aaPredicted RBP13.36□□□□□ -0.27
TMEM116-202ENST00000437003 GANQ9H2C0 597 aa13.36□□□□□ -0.27
TMEM116-202ENST00000437003 BCAS3Q9H6U6 928 aa13.36□□□□□ -0.27
TMEM116-202ENST00000437003 FGFR1OP2Q9NVK5 253 aa13.36□□□□□ -0.27
TMEM116-202ENST00000437003 PNMA3Q9UL41 463 aa13.36□□□□□ -0.27
TMEM116-202ENST00000437003 ATF5Q9Y2D1 282 aaPredicted RBP13.36□□□□□ -0.27
TMEM116-202ENST00000437003 CETN3O15182 167 aa13.35□□□□□ -0.27
TMEM116-202ENST00000437003 EVI5O60447 810 aa13.35□□□□□ -0.27
TMEM116-202ENST00000437003 ZBTB48P10074 688 aaPredicted RBP13.35□□□□□ -0.27
TMEM116-202ENST00000437003 EEF2P13639 858 aaKnown RBP13.35□□□□□ -0.27
TMEM116-202ENST00000437003 THEMIS2Q5TEJ8 643 aa13.35□□□□□ -0.27
TMEM116-202ENST00000437003 IRF2BP2Q7Z5L9 587 aa13.35□□□□□ -0.27
TMEM116-202ENST00000437003 ANO3Q9BYT9 981 aa13.35□□□□□ -0.27
TMEM116-202ENST00000437003 KCNMB3Q9NPA1 279 aa13.35□□□□□ -0.27
TMEM116-202ENST00000437003 OSGEPQ9NPF4 335 aa13.35□□□□□ -0.27
TMEM116-202ENST00000437003 DBR1Q9UK59 544 aaKnown RBP13.35□□□□□ -0.27
TMEM116-202ENST00000437003 HDAC9Q9UKV0 1011 aa13.35□□□□□ -0.27
TMEM116-202ENST00000437003 SRCAPQ6ZRS2 3230 aa13.35□□□□□ -0.27
TMEM116-202ENST00000437003 FGFR4P22455 802 aa13.35□□□□□ -0.27
TMEM116-202ENST00000437003 CRKP46108 304 aa13.35□□□□□ -0.27
TMEM116-202ENST00000437003 DR1Q01658 176 aa13.35□□□□□ -0.27
TMEM116-202ENST00000437003 CEP63Q96MT8 703 aa13.35□□□□□ -0.27
TMEM116-202ENST00000437003 NAP1L4Q99733 375 aaKnown RBP13.35□□□□□ -0.27
TMEM116-202ENST00000437003 KCTD10Q9H3F6 313 aa13.35□□□□□ -0.27
TMEM116-202ENST00000437003 SEMA4AQ9H3S1 761 aa13.35□□□□□ -0.27
TMEM116-202ENST00000437003 ERVK-5Q9HDB9 667 aa13.35□□□□□ -0.27
TMEM116-202ENST00000437003 SLC5A4Q9NY91 659 aa13.35□□□□□ -0.27
TMEM116-202ENST00000437003 PCDHA2Q9Y5H9 948 aa13.35□□□□□ -0.27
TMEM116-202ENST00000437003 LTBP1Q14766 1721 aa13.35□□□□□ -0.27
TMEM116-202ENST00000437003 CCDC169A6NNP5 214 aa13.34□□□□□ -0.27
TMEM116-202ENST00000437003 AP1G2O75843 785 aa13.34□□□□□ -0.27
TMEM116-202ENST00000437003 KRT13P13646 458 aa13.34□□□□□ -0.27
TMEM116-202ENST00000437003 RBM5P52756 815 aaKnown RBP eCLIP13.34□□□□□ -0.27
TMEM116-202ENST00000437003 ARSHQ5FYA8 562 aa13.34□□□□□ -0.27
TMEM116-202ENST00000437003 AP1ARQ63HQ0 302 aa13.34□□□□□ -0.27
TMEM116-202ENST00000437003 NT5DC3Q86UY8 548 aa13.34□□□□□ -0.27
TMEM116-202ENST00000437003 KIAA0825Q8IV33 1275 aa13.34□□□□□ -0.27
TMEM116-202ENST00000437003 U2AF1L4Q8WU68 220 aaKnown RBP13.34□□□□□ -0.27
TMEM116-202ENST00000437003 NSRP1Q9H0G5 558 aaKnown RBP13.34□□□□□ -0.27
TMEM116-202ENST00000437003 GLT8D2Q9H1C3 349 aa13.34□□□□□ -0.27
TMEM116-202ENST00000437003 PABPC3Q9H361 631 aaKnown RBP13.34□□□□□ -0.27
TMEM116-202ENST00000437003 DNAJC18Q9H819 358 aa13.34□□□□□ -0.27
TMEM116-202ENST00000437003 DBNDD1Q9H9R9 158 aa13.34□□□□□ -0.27
TMEM116-202ENST00000437003 KCNQ5Q9NR82 932 aa13.34□□□□□ -0.27
TMEM116-202ENST00000437003 DAAM1Q9Y4D1 1078 aa13.34□□□□□ -0.27
TMEM116-202ENST00000437003 SNX3O60493 162 aa13.34□□□□□ -0.27
TMEM116-202ENST00000437003 ABCB4P21439 1286 aa13.34□□□□□ -0.27
TMEM116-202ENST00000437003 CERKLQ49MI3 558 aaPredicted RBP13.34□□□□□ -0.27
TMEM116-202ENST00000437003 ANKRD20A2Q5SQ80 823 aa13.34□□□□□ -0.27
TMEM116-202ENST00000437003 HYIQ5T013 277 aa13.34□□□□□ -0.27
TMEM116-202ENST00000437003 ANKRD20A1Q5TYW2 823 aa13.34□□□□□ -0.27
TMEM116-202ENST00000437003 ANKRD20A3Q5VUR7 823 aa13.34□□□□□ -0.27
TMEM116-202ENST00000437003 SLFN13Q68D06 897 aa13.34□□□□□ -0.27
TMEM116-202ENST00000437003 FOXR2Q6PJQ5 311 aa13.34□□□□□ -0.27
TMEM116-202ENST00000437003 SLC30A10Q6XR72 485 aa13.34□□□□□ -0.27
TMEM116-202ENST00000437003 SFR1Q86XK3 245 aa13.34□□□□□ -0.27
TMEM116-202ENST00000437003 CATSPER3Q86XQ3 398 aa13.34□□□□□ -0.27
TMEM116-202ENST00000437003 RBM46Q8TBY0 533 aaKnown RBP13.34□□□□□ -0.27
TMEM116-202ENST00000437003 TXLNGYQ9BZA5 131 aa13.34□□□□□ -0.27
TMEM116-202ENST00000437003 RAB17Q9H0T7 212 aa13.34□□□□□ -0.27
TMEM116-202ENST00000437003 PCDHAC2Q9Y5I4 1007 aa13.34□□□□□ -0.27
TMEM116-202ENST00000437003 TESPA1A2RU30 521 aaPredicted RBP13.33□□□□□ -0.27
TMEM116-202ENST00000437003 SFI1A8K8P3 1242 aa13.33□□□□□ -0.27
TMEM116-202ENST00000437003 RSPH10B2B2RC85 870 aa13.33□□□□□ -0.27
TMEM116-202ENST00000437003 TCP11X1B4DZS4 312 aa13.33□□□□□ -0.27
TMEM116-202ENST00000437003 CLIC2O15247 247 aa13.33□□□□□ -0.27
TMEM116-202ENST00000437003 GNA14O95837 355 aa13.33□□□□□ -0.27
TMEM116-202ENST00000437003 H2AFZP0C0S5 128 aa13.33□□□□□ -0.27
TMEM116-202ENST00000437003 RSPH10BP0C881 870 aa13.33□□□□□ -0.27
TMEM116-202ENST00000437003 UCHL3P15374 230 aa13.33□□□□□ -0.27
TMEM116-202ENST00000437003 NPR1P16066 1061 aa13.33□□□□□ -0.27
TMEM116-202ENST00000437003 POU5F1Q01860 360 aaKnown RBP13.33□□□□□ -0.27
TMEM116-202ENST00000437003 GJB7Q6PEY0 223 aa13.33□□□□□ -0.27
TMEM116-202ENST00000437003 H2AFVQ71UI9 128 aa13.33□□□□□ -0.27
TMEM116-202ENST00000437003 RASGEF1CQ8N431 466 aa13.33□□□□□ -0.27
TMEM116-202ENST00000437003 SEC14L1Q92503 715 aa13.33□□□□□ -0.27
TMEM116-202ENST00000437003 REEP2Q9BRK0 252 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms