RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 RHOBTB3O94955 611 aa7.8□□□□□ -1.16
LSM3P3-201ENST00000436601 LGALS2P05162 132 aa7.8□□□□□ -1.16
LSM3P3-201ENST00000436601 MMP3P08254 477 aa7.8□□□□□ -1.16
LSM3P3-201ENST00000436601 FSHRP23945 695 aa7.8□□□□□ -1.16
LSM3P3-201ENST00000436601 CNGA1P29973 690 aa7.8□□□□□ -1.16
LSM3P3-201ENST00000436601 EPHA4P54764 986 aa7.8□□□□□ -1.16
LSM3P3-201ENST00000436601 ASIC1P78348 528 aa7.8□□□□□ -1.16
LSM3P3-201ENST00000436601 NKX3-2P78367 333 aa7.8□□□□□ -1.16
LSM3P3-201ENST00000436601 EHHADHQ08426 723 aa7.8□□□□□ -1.16
LSM3P3-201ENST00000436601 RAD51AP2Q09MP3 1159 aa7.8□□□□□ -1.16
LSM3P3-201ENST00000436601 MAPK7Q13164 816 aa7.8□□□□□ -1.16
LSM3P3-201ENST00000436601 KCNB1Q14721 858 aa7.8□□□□□ -1.16
LSM3P3-201ENST00000436601 PLCB4Q15147 1175 aa7.8□□□□□ -1.16
LSM3P3-201ENST00000436601 TARBP2Q15633 366 aaKnown RBP7.8□□□□□ -1.16
LSM3P3-201ENST00000436601 STX1AQ16623 288 aa7.8□□□□□ -1.16
LSM3P3-201ENST00000436601 DPCR1Q3MIW9 517 aa7.8□□□□□ -1.16
LSM3P3-201ENST00000436601 XKR9Q5GH70 373 aa7.8□□□□□ -1.16
LSM3P3-201ENST00000436601 C11orf57Q6ZUT1 292 aaPredicted RBP7.8□□□□□ -1.16
LSM3P3-201ENST00000436601 UNC13DQ70J99 1090 aa7.8□□□□□ -1.16
LSM3P3-201ENST00000436601 OTUD6AQ7L8S5 288 aa7.8□□□□□ -1.16
LSM3P3-201ENST00000436601 CYP2U1Q7Z449 544 aa7.8□□□□□ -1.16
LSM3P3-201ENST00000436601 RGL4Q8IZJ4 473 aa7.8□□□□□ -1.16
LSM3P3-201ENST00000436601 TRIML1Q8N9V2 468 aa7.8□□□□□ -1.16
LSM3P3-201ENST00000436601 SCG3Q8WXD2 468 aaKnown RBP7.8□□□□□ -1.16
LSM3P3-201ENST00000436601 GLG1Q92896 1179 aa7.8□□□□□ -1.16
LSM3P3-201ENST00000436601 HPS3Q969F9 1004 aa7.8□□□□□ -1.16
LSM3P3-201ENST00000436601 VTI1AQ96AJ9 217 aa7.8□□□□□ -1.16
LSM3P3-201ENST00000436601 CEP170P1Q96L14 293 aa7.8□□□□□ -1.16
LSM3P3-201ENST00000436601 REEP2Q9BRK0 252 aa7.8□□□□□ -1.16
LSM3P3-201ENST00000436601 RBSNQ9H1K0 784 aa7.8□□□□□ -1.16
LSM3P3-201ENST00000436601 TSPY26PQ9H489 355 aa7.8□□□□□ -1.16
LSM3P3-201ENST00000436601 RNPEPQ9H4A4 650 aa7.8□□□□□ -1.16
LSM3P3-201ENST00000436601 AZI2Q9H6S1 392 aa7.8□□□□□ -1.16
LSM3P3-201ENST00000436601 POLD4Q9HCU8 107 aa7.8□□□□□ -1.16
LSM3P3-201ENST00000436601 PDLIM7Q9NR12 457 aa7.8□□□□□ -1.16
LSM3P3-201ENST00000436601 CYP26B1Q9NR63 512 aa7.8□□□□□ -1.16
LSM3P3-201ENST00000436601 NRBP2Q9NSY0 501 aa7.8□□□□□ -1.16
LSM3P3-201ENST00000436601 PANK4Q9NVE7 773 aa7.8□□□□□ -1.16
LSM3P3-201ENST00000436601 KCND2Q9NZV8 630 aa7.8□□□□□ -1.16
LSM3P3-201ENST00000436601 PTPN22Q9Y2R2 807 aa7.8□□□□□ -1.16
LSM3P3-201ENST00000436601 PTCH2Q9Y6C5 1203 aa7.8□□□□□ -1.16
LSM3P3-201ENST00000436601 MYADML2A6NDP7 307 aa7.79□□□□□ -1.16
LSM3P3-201ENST00000436601 RSPH10B2B2RC85 870 aa7.79□□□□□ -1.16
LSM3P3-201ENST00000436601 ZBTB42B2RXF5 422 aa7.79□□□□□ -1.16
LSM3P3-201ENST00000436601 KRT18P05783 430 aaKnown RBP7.79□□□□□ -1.16
LSM3P3-201ENST00000436601 RSPH10BP0C881 870 aa7.79□□□□□ -1.16
LSM3P3-201ENST00000436601 ZNF286BP0CG31 522 aa7.79□□□□□ -1.16
LSM3P3-201ENST00000436601 HSPA8P11142 646 aaKnown RBP7.79□□□□□ -1.16
LSM3P3-201ENST00000436601 IDEP14735 1019 aa7.79□□□□□ -1.16
LSM3P3-201ENST00000436601 GUCY2CP25092 1073 aa7.79□□□□□ -1.16
LSM3P3-201ENST00000436601 MARK3P27448 753 aa7.79□□□□□ -1.16
LSM3P3-201ENST00000436601 GRK4P32298 578 aa7.79□□□□□ -1.16
LSM3P3-201ENST00000436601 SLC26A2P50443 739 aa7.79□□□□□ -1.16
LSM3P3-201ENST00000436601 GJA9P57773 515 aa7.79□□□□□ -1.16
LSM3P3-201ENST00000436601 BEX3Q00994 111 aa7.79□□□□□ -1.16
LSM3P3-201ENST00000436601 STK4Q13043 487 aa7.79□□□□□ -1.16
LSM3P3-201ENST00000436601 DGKDQ16760 1214 aa7.79□□□□□ -1.16
LSM3P3-201ENST00000436601 ANO6Q4KMQ2 910 aa7.79□□□□□ -1.16
LSM3P3-201ENST00000436601 PLA2G2CQ5R387 149 aa7.79□□□□□ -1.16
LSM3P3-201ENST00000436601 ZNF658Q5TYW1 1059 aaPredicted RBP7.79□□□□□ -1.16
LSM3P3-201ENST00000436601 CAPN12Q6ZSI9 719 aa7.79□□□□□ -1.16
LSM3P3-201ENST00000436601 SMYD4Q8IYR2 804 aaPredicted RBP7.79□□□□□ -1.16
LSM3P3-201ENST00000436601 DAW1Q8N136 415 aa7.79□□□□□ -1.16
LSM3P3-201ENST00000436601 MLKLQ8NB16 471 aa7.79□□□□□ -1.16
LSM3P3-201ENST00000436601 ATP8B4Q8TF62 1192 aa7.79□□□□□ -1.16
LSM3P3-201ENST00000436601 KAT2BQ92831 832 aa7.79□□□□□ -1.16
LSM3P3-201ENST00000436601 AP5M1Q9H0R1 490 aa7.79□□□□□ -1.16
LSM3P3-201ENST00000436601 UPF3AQ9H1J1 476 aaKnown RBP7.79□□□□□ -1.16
LSM3P3-201ENST00000436601 DNAJC25Q9H1X3 360 aa7.79□□□□□ -1.16
LSM3P3-201ENST00000436601 CYLDQ9NQC7 956 aa7.79□□□□□ -1.16
LSM3P3-201ENST00000436601 ANO10Q9NW15 660 aa7.79□□□□□ -1.16
LSM3P3-201ENST00000436601 RMND1Q9NWS8 449 aa7.79□□□□□ -1.16
LSM3P3-201ENST00000436601 ERAP1Q9NZ08 941 aa7.79□□□□□ -1.16
LSM3P3-201ENST00000436601 GDAQ9Y2T3 454 aa7.79□□□□□ -1.16
LSM3P3-201ENST00000436601 PCDHA2Q9Y5H9 948 aa7.79□□□□□ -1.16
LSM3P3-201ENST00000436601 SYNRGQ9UMZ2 1314 aa7.78□□□□□ -1.16
LSM3P3-201ENST00000436601 FSD2A1L4K1 749 aa7.78□□□□□ -1.16
LSM3P3-201ENST00000436601 HBP1O60381 514 aa7.78□□□□□ -1.16
LSM3P3-201ENST00000436601 USO1O60763 962 aaKnown RBP7.78□□□□□ -1.16
LSM3P3-201ENST00000436601 HIP1RO75146 1068 aa7.78□□□□□ -1.16
LSM3P3-201ENST00000436601 ADAMTS4O75173 837 aa7.78□□□□□ -1.16
LSM3P3-201ENST00000436601 PGK1P00558 417 aa7.78□□□□□ -1.16
LSM3P3-201ENST00000436601 RARBP10826 455 aa7.78□□□□□ -1.16
LSM3P3-201ENST00000436601 GRM5P41594 1212 aa7.78□□□□□ -1.16
LSM3P3-201ENST00000436601 CPT1AP50416 773 aa7.78□□□□□ -1.16
LSM3P3-201ENST00000436601 ZNF131P52739 623 aa7.78□□□□□ -1.16
LSM3P3-201ENST00000436601 SOX10P56693 466 aa7.78□□□□□ -1.16
LSM3P3-201ENST00000436601 COASYQ13057 564 aa7.78□□□□□ -1.16
LSM3P3-201ENST00000436601 PSMD2Q13200 908 aa7.78□□□□□ -1.16
LSM3P3-201ENST00000436601 ARID5BQ14865 1188 aa7.78□□□□□ -1.16
LSM3P3-201ENST00000436601 FSCN1Q16658 493 aaKnown RBP7.78□□□□□ -1.16
LSM3P3-201ENST00000436601 MTERF2Q49AM1 385 aa7.78□□□□□ -1.16
LSM3P3-201ENST00000436601 HERC4Q5GLZ8 1057 aaPredicted RBP7.78□□□□□ -1.16
LSM3P3-201ENST00000436601 CCSAPQ6IQ19 270 aaPredicted RBP7.78□□□□□ -1.16
LSM3P3-201ENST00000436601 MAEAQ7L5Y9 396 aa7.78□□□□□ -1.16
LSM3P3-201ENST00000436601 SFR1Q86XK3 245 aa7.78□□□□□ -1.16
LSM3P3-201ENST00000436601 CCDC65Q8IXS2 484 aa7.78□□□□□ -1.16
LSM3P3-201ENST00000436601 CCDC116Q8IYX3 515 aa7.78□□□□□ -1.16
LSM3P3-201ENST00000436601 TNS4Q8IZW8 715 aa7.78□□□□□ -1.16
LSM3P3-201ENST00000436601 GLIS3Q8NEA6 775 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms