RNA–Protein interactions for RNA: ENST00000435747.2

CPNE1-214, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-214ENST00000435747 NRLP54845 237 aa11.85□□□□□ -0.51
CPNE1-214ENST00000435747 BCAR1P56945 870 aa11.85□□□□□ -0.51
CPNE1-214ENST00000435747 GPC5P78333 572 aa11.85□□□□□ -0.51
CPNE1-214ENST00000435747 FUT2Q10981 343 aa11.85□□□□□ -0.51
CPNE1-214ENST00000435747 TRAF1Q13077 416 aa11.85□□□□□ -0.51
CPNE1-214ENST00000435747 HTR4Q13639 388 aa11.85□□□□□ -0.51
CPNE1-214ENST00000435747 ADCK5Q3MIX3 580 aa11.85□□□□□ -0.51
CPNE1-214ENST00000435747 AASDHQ4L235 1098 aaPredicted RBP11.85□□□□□ -0.51
CPNE1-214ENST00000435747 CYP26C1Q6V0L0 522 aa11.85□□□□□ -0.51
CPNE1-214ENST00000435747 TMTC2Q8N394 836 aa11.85□□□□□ -0.51
CPNE1-214ENST00000435747 TMEM40Q8WWA1 233 aa11.85□□□□□ -0.51
CPNE1-214ENST00000435747 KCNB2Q92953 911 aa11.85□□□□□ -0.51
CPNE1-214ENST00000435747 LTB4R2Q9NPC1 389 aa11.85□□□□□ -0.51
CPNE1-214ENST00000435747 DOCK6Q96HP0 2047 aa11.84□□□□□ -0.51
CPNE1-214ENST00000435747 CCDC195A0A1B0GUA6 201 aa11.84□□□□□ -0.51
CPNE1-214ENST00000435747 GSTTP1A0A1W2PQM5 241 aa11.84□□□□□ -0.51
CPNE1-214ENST00000435747 ANHXE9PGG2 379 aa11.84□□□□□ -0.51
CPNE1-214ENST00000435747 NCAM2O15394 837 aa11.84□□□□□ -0.51
CPNE1-214ENST00000435747 LAMP2P13473 410 aa11.84□□□□□ -0.51
CPNE1-214ENST00000435747 RXRAP19793 462 aa11.84□□□□□ -0.51
CPNE1-214ENST00000435747 KIF5BP33176 963 aa11.84□□□□□ -0.51
CPNE1-214ENST00000435747 RBM25P49756 843 aaKnown RBP11.84□□□□□ -0.51
CPNE1-214ENST00000435747 SLC44A4Q53GD3 710 aa11.84□□□□□ -0.51
CPNE1-214ENST00000435747 CASC1Q6TDU7 716 aa11.84□□□□□ -0.51
CPNE1-214ENST00000435747 RSPO2Q6UXX9 243 aaPredicted RBP11.84□□□□□ -0.51
CPNE1-214ENST00000435747 TMTC3Q6ZXV5 915 aa11.84□□□□□ -0.51
CPNE1-214ENST00000435747 GET4Q7L5D6 327 aaPredicted RBP11.84□□□□□ -0.51
CPNE1-214ENST00000435747 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.84□□□□□ -0.51
CPNE1-214ENST00000435747 DDX53Q86TM3 631 aaKnown RBP11.84□□□□□ -0.51
CPNE1-214ENST00000435747 NLRX1Q86UT6 975 aa11.84□□□□□ -0.51
CPNE1-214ENST00000435747 CMTR1Q8N1G2 835 aaKnown RBP11.84□□□□□ -0.51
CPNE1-214ENST00000435747 RNF169Q8NCN4 708 aa11.84□□□□□ -0.51
CPNE1-214ENST00000435747 ST13P5Q8NFI4 369 aaPredicted RBP11.84□□□□□ -0.51
CPNE1-214ENST00000435747 CTCFLQ8NI51 663 aaPredicted RBP11.84□□□□□ -0.51
CPNE1-214ENST00000435747 TRAPPC12Q8WVT3 735 aa11.84□□□□□ -0.51
CPNE1-214ENST00000435747 KLHL5Q96PQ7 755 aa11.84□□□□□ -0.51
CPNE1-214ENST00000435747 MRPL9Q9BYD2 267 aaKnown RBP11.84□□□□□ -0.51
CPNE1-214ENST00000435747 LRRC2Q9BYS8 371 aa11.84□□□□□ -0.51
CPNE1-214ENST00000435747 CDHR5Q9HBB8 845 aa11.84□□□□□ -0.51
CPNE1-214ENST00000435747 MAN1C1Q9NR34 630 aa11.84□□□□□ -0.51
CPNE1-214ENST00000435747 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.84□□□□□ -0.51
CPNE1-214ENST00000435747 TM4SF5O14894 197 aa11.83□□□□□ -0.52
CPNE1-214ENST00000435747 INPPL1O15357 1258 aa11.83□□□□□ -0.52
CPNE1-214ENST00000435747 CDC45O75419 566 aa11.83□□□□□ -0.52
CPNE1-214ENST00000435747 KCNK5O95279 499 aa11.83□□□□□ -0.52
CPNE1-214ENST00000435747 CD72P21854 359 aa11.83□□□□□ -0.52
CPNE1-214ENST00000435747 SIM2Q14190 667 aaPredicted RBP11.83□□□□□ -0.52
CPNE1-214ENST00000435747 DSC3Q14574 896 aa11.83□□□□□ -0.52
CPNE1-214ENST00000435747 PLCB4Q15147 1175 aa11.83□□□□□ -0.52
CPNE1-214ENST00000435747 CLLU1OSQ5K130 101 aa11.83□□□□□ -0.52
CPNE1-214ENST00000435747 ELMSAN1Q6PJG2 1045 aa11.83□□□□□ -0.52
CPNE1-214ENST00000435747 APOA5Q6Q788 366 aa11.83□□□□□ -0.52
CPNE1-214ENST00000435747 USP17L6PQ6QN14 398 aa11.83□□□□□ -0.52
CPNE1-214ENST00000435747 FAM228AQ86W67 206 aa11.83□□□□□ -0.52
CPNE1-214ENST00000435747 TMEM173Q86WV6 379 aaPredicted RBP11.83□□□□□ -0.52
CPNE1-214ENST00000435747 FANCBQ8NB91 859 aa11.83□□□□□ -0.52
CPNE1-214ENST00000435747 ZCCHC14Q8WYQ9 949 aaKnown RBP11.83□□□□□ -0.52
CPNE1-214ENST00000435747 SMG7Q92540 1137 aaKnown RBP11.83□□□□□ -0.52
CPNE1-214ENST00000435747 CLDN23Q96B33 292 aa11.83□□□□□ -0.52
CPNE1-214ENST00000435747 RRP36Q96EU6 259 aaKnown RBP11.83□□□□□ -0.52
CPNE1-214ENST00000435747 KIF12Q96FN5 646 aa11.83□□□□□ -0.52
CPNE1-214ENST00000435747 LZTS2Q9BRK4 669 aa11.83□□□□□ -0.52
CPNE1-214ENST00000435747 RHOBTB2Q9BYZ6 727 aa11.83□□□□□ -0.52
CPNE1-214ENST00000435747 AZI2Q9H6S1 392 aa11.83□□□□□ -0.52
CPNE1-214ENST00000435747 BRPF3Q9ULD4 1205 aa11.83□□□□□ -0.52
CPNE1-214ENST00000435747 MTCL1Q9Y4B5 1905 aaKnown RBP11.82□□□□□ -0.52
CPNE1-214ENST00000435747 CARNS1A5YM72 827 aa11.82□□□□□ -0.52
CPNE1-214ENST00000435747 CCDC69A6NI79 296 aa11.82□□□□□ -0.52
CPNE1-214ENST00000435747 ZC3H11AO75152 810 aaKnown RBP eCLIP11.82□□□□□ -0.52
CPNE1-214ENST00000435747 CNPP09543 421 aaKnown RBP11.82□□□□□ -0.52
CPNE1-214ENST00000435747 CALM1P0DP23 149 aa11.82□□□□□ -0.52
CPNE1-214ENST00000435747 CALM2P0DP24 149 aa11.82□□□□□ -0.52
CPNE1-214ENST00000435747 CALM3P0DP25 149 aa11.82□□□□□ -0.52
CPNE1-214ENST00000435747 RPS9P46781 194 aaKnown RBP11.82□□□□□ -0.52
CPNE1-214ENST00000435747 GNAQP50148 359 aa11.82□□□□□ -0.52
CPNE1-214ENST00000435747 FOXC1Q12948 553 aa11.82□□□□□ -0.52
CPNE1-214ENST00000435747 PPP2R5DQ14738 602 aa11.82□□□□□ -0.52
CPNE1-214ENST00000435747 TYW1BQ6NUM6 668 aa11.82□□□□□ -0.52
CPNE1-214ENST00000435747 MTHFD1LQ6UB35 978 aa11.82□□□□□ -0.52
CPNE1-214ENST00000435747 DHX32Q7L7V1 743 aaKnown RBP11.82□□□□□ -0.52
CPNE1-214ENST00000435747 ECHDC2Q86YB7 292 aa11.82□□□□□ -0.52
CPNE1-214ENST00000435747 RAB11FIP4Q86YS3 637 aa11.82□□□□□ -0.52
CPNE1-214ENST00000435747 C12orf50Q8NA57 414 aaPredicted RBP11.82□□□□□ -0.52
CPNE1-214ENST00000435747 HELQQ8TDG4 1101 aa11.82□□□□□ -0.52
CPNE1-214ENST00000435747 PIBF1Q8WXW3 757 aa11.82□□□□□ -0.52
CPNE1-214ENST00000435747 IGSF21Q96ID5 467 aa11.82□□□□□ -0.52
CPNE1-214ENST00000435747 NELL2Q99435 816 aa11.82□□□□□ -0.52
CPNE1-214ENST00000435747 TMEM121BQ9BXQ6 578 aaPredicted RBP11.82□□□□□ -0.52
CPNE1-214ENST00000435747 ADAM33Q9BZ11 813 aa11.82□□□□□ -0.52
CPNE1-214ENST00000435747 PIDD1Q9HB75 910 aa11.82□□□□□ -0.52
CPNE1-214ENST00000435747 FAM217BQ9NTX9 383 aaPredicted RBP11.82□□□□□ -0.52
CPNE1-214ENST00000435747 DPP7Q9UHL4 492 aa11.82□□□□□ -0.52
CPNE1-214ENST00000435747 SLC12A7Q9Y666 1083 aa11.82□□□□□ -0.52
CPNE1-214ENST00000435747 CNTNAP5Q8WYK1 1306 aa11.82□□□□□ -0.52
CPNE1-214ENST00000435747 ADAMTS20P59510 1910 aa11.82□□□□□ -0.52
CPNE1-214ENST00000435747 MYO18BQ8IUG5 2567 aa11.81□□□□□ -0.52
CPNE1-214ENST00000435747 SSBP05455 408 aaKnown RBP eCLIP11.81□□□□□ -0.52
CPNE1-214ENST00000435747 KCNA2P16389 499 aa11.81□□□□□ -0.52
CPNE1-214ENST00000435747 ZSCAN20P17040 1043 aaPredicted RBP11.81□□□□□ -0.52
CPNE1-214ENST00000435747 NCLP19338 710 aaKnown RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms