RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 DNM1Q05193 864 aaKnown RBP20.35■□□□□ 0.85
HLA-F-220ENST00000434407 MBTD1Q05BQ5 628 aa20.35■□□□□ 0.85
HLA-F-220ENST00000434407 MAPK7Q13164 816 aa20.35■□□□□ 0.85
HLA-F-220ENST00000434407 PPP2R2DQ66LE6 453 aa20.35■□□□□ 0.85
HLA-F-220ENST00000434407 CATSPER4Q7RTX7 472 aa20.35■□□□□ 0.85
HLA-F-220ENST00000434407 DAW1Q8N136 415 aa20.35■□□□□ 0.85
HLA-F-220ENST00000434407 GUCD1Q96NT3 240 aa20.35■□□□□ 0.85
HLA-F-220ENST00000434407 AGPAT5Q9NUQ2 364 aa20.35■□□□□ 0.85
HLA-F-220ENST00000434407 DACT1Q9NYF0 836 aa20.35■□□□□ 0.85
HLA-F-220ENST00000434407 A0A0U1RQF3 1178 aa20.34■□□□□ 0.85
HLA-F-220ENST00000434407 LINC01553A4QN01 128 aa20.34■□□□□ 0.85
HLA-F-220ENST00000434407 NAMPTP43490 491 aa20.34■□□□□ 0.85
HLA-F-220ENST00000434407 AMHR2Q16671 573 aa20.34■□□□□ 0.85
HLA-F-220ENST00000434407 FOXD4L6Q3SYB3 417 aaPredicted RBP20.34■□□□□ 0.85
HLA-F-220ENST00000434407 AXDND1Q5T1B0 1012 aaPredicted RBP20.34■□□□□ 0.85
HLA-F-220ENST00000434407 FOXD4L3Q6VB84 417 aaPredicted RBP20.34■□□□□ 0.85
HLA-F-220ENST00000434407 KCNG4Q8TDN1 519 aa20.34■□□□□ 0.85
HLA-F-220ENST00000434407 YME1L1Q96TA2 773 aa20.34■□□□□ 0.85
HLA-F-220ENST00000434407 TMEM161AQ9NX61 479 aa20.34■□□□□ 0.85
HLA-F-220ENST00000434407 RCOR1Q9UKL0 485 aa20.34■□□□□ 0.85
HLA-F-220ENST00000434407 CFAP45Q9UL16 551 aa20.34■□□□□ 0.85
HLA-F-220ENST00000434407 RALGAPA2Q2PPJ7 1873 aa20.34■□□□□ 0.85
HLA-F-220ENST00000434407 HIP1RO75146 1068 aa20.33■□□□□ 0.85
HLA-F-220ENST00000434407 GRIN2CQ14957 1233 aa20.33■□□□□ 0.85
HLA-F-220ENST00000434407 PPP2R5AQ15172 486 aa20.33■□□□□ 0.85
HLA-F-220ENST00000434407 FAM187BQ17R55 369 aa20.33■□□□□ 0.85
HLA-F-220ENST00000434407 ARSHQ5FYA8 562 aa20.33■□□□□ 0.85
HLA-F-220ENST00000434407 ZNF598Q86UK7 904 aaKnown RBP20.33■□□□□ 0.85
HLA-F-220ENST00000434407 ECHDC2Q86YB7 292 aa20.33■□□□□ 0.85
HLA-F-220ENST00000434407 RAD54LQ92698 747 aa20.33■□□□□ 0.85
HLA-F-220ENST00000434407 FAM161BQ96MY7 647 aa20.33■□□□□ 0.85
HLA-F-220ENST00000434407 C17orf75Q9HAS0 396 aa20.33■□□□□ 0.85
HLA-F-220ENST00000434407 PIN4Q9Y237 131 aaKnown RBP20.33■□□□□ 0.85
HLA-F-220ENST00000434407 LRRIQ4A6NIV6 560 aa20.32■□□□□ 0.84
HLA-F-220ENST00000434407 CUTAO60888 179 aa20.32■□□□□ 0.84
HLA-F-220ENST00000434407 ZNF623O75123 536 aa20.32■□□□□ 0.84
HLA-F-220ENST00000434407 LINC00271P0C7V0 271 aa20.32■□□□□ 0.84
HLA-F-220ENST00000434407 AXLP30530 894 aa20.32■□□□□ 0.84
HLA-F-220ENST00000434407 ERVK-21P61565 698 aa20.32■□□□□ 0.84
HLA-F-220ENST00000434407 NAALADL2Q58DX5 795 aa20.32■□□□□ 0.84
HLA-F-220ENST00000434407 IFT74Q96LB3 600 aa20.32■□□□□ 0.84
HLA-F-220ENST00000434407 DRC1Q96MC2 740 aa20.32■□□□□ 0.84
HLA-F-220ENST00000434407 C2orf40Q9H1Z8 148 aa20.32■□□□□ 0.84
HLA-F-220ENST00000434407 FZD8Q9H461 694 aa20.32■□□□□ 0.84
HLA-F-220ENST00000434407 POLD4Q9HCU8 107 aa20.32■□□□□ 0.84
HLA-F-220ENST00000434407 STK17AQ9UEE5 414 aa20.32■□□□□ 0.84
HLA-F-220ENST00000434407 DAXXQ9UER7 740 aaPredicted RBP20.32■□□□□ 0.84
HLA-F-220ENST00000434407 CCDC39Q9UFE4 941 aa20.32■□□□□ 0.84
HLA-F-220ENST00000434407 PCDHB7Q9Y5E2 793 aa20.32■□□□□ 0.84
HLA-F-220ENST00000434407 ADGRA3Q8IWK6 1321 aa20.31■□□□□ 0.84
HLA-F-220ENST00000434407 INO80B-WBP1J3KQ70 363 aa20.31■□□□□ 0.84
HLA-F-220ENST00000434407 TSPAN1O60635 241 aa20.31■□□□□ 0.84
HLA-F-220ENST00000434407 EOMESO95936 686 aa20.31■□□□□ 0.84
HLA-F-220ENST00000434407 ATF7P17544 494 aaPredicted RBP20.31■□□□□ 0.84
HLA-F-220ENST00000434407 TXLNAP40222 546 aa20.31■□□□□ 0.84
HLA-F-220ENST00000434407 MCM6Q14566 821 aa20.31■□□□□ 0.84
HLA-F-220ENST00000434407 SPRED2Q7Z698 418 aa20.31■□□□□ 0.84
HLA-F-220ENST00000434407 CMTR2Q8IYT2 770 aaKnown RBP20.31■□□□□ 0.84
HLA-F-220ENST00000434407 LARP4BQ92615 738 aaKnown RBP20.31■□□□□ 0.84
HLA-F-220ENST00000434407 PRIMPOLQ96LW4 560 aa20.31■□□□□ 0.84
HLA-F-220ENST00000434407 CDX2Q99626 313 aaPredicted RBP20.31■□□□□ 0.84
HLA-F-220ENST00000434407 NTPCRQ9BSD7 190 aaKnown RBP20.31■□□□□ 0.84
HLA-F-220ENST00000434407 CCDC113Q9H0I3 377 aa20.31■□□□□ 0.84
HLA-F-220ENST00000434407 RNF19AQ9NV58 838 aa20.31■□□□□ 0.84
HLA-F-220ENST00000434407 LRFN2Q9ULH4 789 aa20.31■□□□□ 0.84
HLA-F-220ENST00000434407 KIAA1671Q9BY89 1806 aa20.31■□□□□ 0.84
HLA-F-220ENST00000434407 PRRC2BQ5JSZ5 2229 aaKnown RBP20.31■□□□□ 0.84
HLA-F-220ENST00000434407 A0A087X0B3 334 aa20.3■□□□□ 0.84
HLA-F-220ENST00000434407 ERLIN2O94905 339 aa20.3■□□□□ 0.84
HLA-F-220ENST00000434407 SSBP05455 408 aaKnown RBP eCLIP20.3■□□□□ 0.84
HLA-F-220ENST00000434407 UBXN11Q5T124 520 aa20.3■□□□□ 0.84
HLA-F-220ENST00000434407 TWF2Q6IBS0 349 aaKnown RBP20.3■□□□□ 0.84
HLA-F-220ENST00000434407 ZBTB8OSQ8IWT0 167 aa20.3■□□□□ 0.84
HLA-F-220ENST00000434407 RASSF8Q8NHQ8 419 aa20.3■□□□□ 0.84
HLA-F-220ENST00000434407 CLP1Q92989 425 aaKnown RBP20.3■□□□□ 0.84
HLA-F-220ENST00000434407 CCDC51Q96ER9 411 aa20.3■□□□□ 0.84
HLA-F-220ENST00000434407 TGS1Q96RS0 853 aaKnown RBP20.3■□□□□ 0.84
HLA-F-220ENST00000434407 PRMT7Q9NVM4 692 aaPredicted RBP20.3■□□□□ 0.84
HLA-F-220ENST00000434407 PCDHA7Q9UN72 937 aa20.3■□□□□ 0.84
HLA-F-220ENST00000434407 ATP6V1DQ9Y5K8 247 aa20.3■□□□□ 0.84
HLA-F-220ENST00000434407 MYO7AQ13402 2215 aa20.3■□□□□ 0.84
HLA-F-220ENST00000434407 EYSQ5T1H1 3165 aa20.29■□□□□ 0.84
HLA-F-220ENST00000434407 SLC34A2O95436 690 aa20.29■□□□□ 0.84
HLA-F-220ENST00000434407 SKIP12755 728 aa20.29■□□□□ 0.84
HLA-F-220ENST00000434407 ARF4P18085 180 aaPredicted RBP20.29■□□□□ 0.84
HLA-F-220ENST00000434407 NPTX2P47972 431 aa20.29■□□□□ 0.84
HLA-F-220ENST00000434407 RAB27AP51159 221 aa20.29■□□□□ 0.84
HLA-F-220ENST00000434407 EFNA5P52803 228 aa20.29■□□□□ 0.84
HLA-F-220ENST00000434407 NUCB2P80303 420 aa20.29■□□□□ 0.84
HLA-F-220ENST00000434407 RRAGBQ5VZM2 374 aa20.29■□□□□ 0.84
HLA-F-220ENST00000434407 SHC4Q6S5L8 630 aa20.29■□□□□ 0.84
HLA-F-220ENST00000434407 CCDC73Q6ZRK6 1079 aa20.29■□□□□ 0.84
HLA-F-220ENST00000434407 MRPL10Q7Z7H8 261 aaKnown RBP20.29■□□□□ 0.84
HLA-F-220ENST00000434407 GPBP1Q86WP2 473 aa20.29■□□□□ 0.84
HLA-F-220ENST00000434407 DEPTORQ8TB45 409 aa20.29■□□□□ 0.84
HLA-F-220ENST00000434407 SPIRE2Q8WWL2 714 aa20.29■□□□□ 0.84
HLA-F-220ENST00000434407 FAM105AQ9NUU6 356 aa20.29■□□□□ 0.84
HLA-F-220ENST00000434407 ARHGAP28Q9P2N2 729 aa20.29■□□□□ 0.84
HLA-F-220ENST00000434407 ODF2LQ9ULJ1 636 aa20.29■□□□□ 0.84
HLA-F-220ENST00000434407 PRUNE2Q8WUY3 3088 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms