RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 TRPM4Q8TD43 1214 aa16.88■□□□□ 0.29
SCARF1-203ENST00000434376 ARHGEF26Q96DR7 871 aa16.88■□□□□ 0.29
SCARF1-203ENST00000434376 THAP2Q9H0W7 228 aa16.88■□□□□ 0.29
SCARF1-203ENST00000434376 RANBP17Q9H2T7 1088 aaKnown RBP16.88■□□□□ 0.29
SCARF1-203ENST00000434376 DNAJC17Q9NVM6 304 aaKnown RBP16.88■□□□□ 0.29
SCARF1-203ENST00000434376 FAM184BQ9ULE4 1060 aa16.88■□□□□ 0.29
SCARF1-203ENST00000434376 ZNF536O15090 1300 aa16.88■□□□□ 0.29
SCARF1-203ENST00000434376 PITPNM2Q9BZ72 1349 aa16.88■□□□□ 0.29
SCARF1-203ENST00000434376 IGSF9BQ9UPX0 1349 aa16.88■□□□□ 0.29
SCARF1-203ENST00000434376 ANKRD63C9JTQ0 380 aa16.88■□□□□ 0.29
SCARF1-203ENST00000434376 KRIT1O00522 736 aa16.88■□□□□ 0.29
SCARF1-203ENST00000434376 CYP26A1O43174 497 aa16.88■□□□□ 0.29
SCARF1-203ENST00000434376 TCP1P17987 556 aaKnown RBP16.88■□□□□ 0.29
SCARF1-203ENST00000434376 ZNF394Q53GI3 561 aa16.88■□□□□ 0.29
SCARF1-203ENST00000434376 HYIQ5T013 277 aa16.88■□□□□ 0.29
SCARF1-203ENST00000434376 PHLDB3Q6NSJ2 640 aa16.88■□□□□ 0.29
SCARF1-203ENST00000434376 LY75O60449 1722 aa16.87■□□□□ 0.29
SCARF1-203ENST00000434376 A0A087WUV0 522 aaPredicted RBP16.87■□□□□ 0.29
SCARF1-203ENST00000434376 LRRIQ4A6NIV6 560 aa16.87■□□□□ 0.29
SCARF1-203ENST00000434376 CCNE2O96020 404 aa16.87■□□□□ 0.29
SCARF1-203ENST00000434376 ICAM1P05362 532 aa16.87■□□□□ 0.29
SCARF1-203ENST00000434376 RARRES1P49788 294 aa16.87■□□□□ 0.29
SCARF1-203ENST00000434376 EDRF1Q3B7T1 1238 aa16.87■□□□□ 0.29
SCARF1-203ENST00000434376 FIGNQ5HY92 759 aa16.87■□□□□ 0.29
SCARF1-203ENST00000434376 CCNI2Q6ZMN8 369 aaPredicted RBP16.87■□□□□ 0.29
SCARF1-203ENST00000434376 NLGN2Q8NFZ4 835 aa16.87■□□□□ 0.29
SCARF1-203ENST00000434376 CTNNBL1Q8WYA6 563 aaPredicted RBP16.87■□□□□ 0.29
SCARF1-203ENST00000434376 PTPN22Q9Y2R2 807 aa16.87■□□□□ 0.29
SCARF1-203ENST00000434376 NFKBIEO00221 500 aa16.87■□□□□ 0.29
SCARF1-203ENST00000434376 GUCY2CP25092 1073 aa16.87■□□□□ 0.29
SCARF1-203ENST00000434376 MCM3P25205 808 aa16.87■□□□□ 0.29
SCARF1-203ENST00000434376 DPH6Q7L8W6 267 aa16.87■□□□□ 0.29
SCARF1-203ENST00000434376 ANKRD35Q8N283 1001 aa16.87■□□□□ 0.29
SCARF1-203ENST00000434376 SLC5A5Q92911 643 aa16.87■□□□□ 0.29
SCARF1-203ENST00000434376 FAM213AQ9BRX8 229 aa16.87■□□□□ 0.29
SCARF1-203ENST00000434376 POLR3CQ9BUI4 534 aaPredicted RBP16.87■□□□□ 0.29
SCARF1-203ENST00000434376 NR2E1Q9Y466 385 aa16.87■□□□□ 0.29
SCARF1-203ENST00000434376 TBX3O15119 743 aa16.86■□□□□ 0.29
SCARF1-203ENST00000434376 CIITAP33076 1130 aa16.86■□□□□ 0.29
SCARF1-203ENST00000434376 BTNL9Q6UXG8 535 aa16.86■□□□□ 0.29
SCARF1-203ENST00000434376 FRMD5Q7Z6J6 570 aa16.86■□□□□ 0.29
SCARF1-203ENST00000434376 FAM160B2Q86V87 743 aa16.86■□□□□ 0.29
SCARF1-203ENST00000434376 TLDC2A0PJX2 215 aa16.86■□□□□ 0.29
SCARF1-203ENST00000434376 RAD51CO43502 376 aa16.86■□□□□ 0.29
SCARF1-203ENST00000434376 P4HBP07237 508 aaKnown RBP16.86■□□□□ 0.29
SCARF1-203ENST00000434376 TRAF3IP3Q9Y228 551 aa16.86■□□□□ 0.29
SCARF1-203ENST00000434376 MAST2Q6P0Q8 1798 aa16.86■□□□□ 0.29
SCARF1-203ENST00000434376 BUB1BO60566 1050 aaPredicted RBP16.86■□□□□ 0.29
SCARF1-203ENST00000434376 FGGP02679 453 aa16.86■□□□□ 0.29
SCARF1-203ENST00000434376 NR3C2P08235 984 aa16.86■□□□□ 0.29
SCARF1-203ENST00000434376 SPOPLQ6IQ16 392 aa16.86■□□□□ 0.29
SCARF1-203ENST00000434376 MMS22LQ6ZRQ5 1243 aa16.86■□□□□ 0.29
SCARF1-203ENST00000434376 CCDC25Q86WR0 208 aa16.86■□□□□ 0.29
SCARF1-203ENST00000434376 NCAPG2Q86XI2 1143 aa16.86■□□□□ 0.29
SCARF1-203ENST00000434376 TRIM51Q9BSJ1 452 aa16.86■□□□□ 0.29
SCARF1-203ENST00000434376 HSPBP1Q9NZL4 362 aa16.86■□□□□ 0.29
SCARF1-203ENST00000434376 STIM2Q9P246 746 aa16.86■□□□□ 0.29
SCARF1-203ENST00000434376 GINS2Q9Y248 185 aa16.86■□□□□ 0.29
SCARF1-203ENST00000434376 TUBBP07437 444 aa16.85■□□□□ 0.29
SCARF1-203ENST00000434376 TNNI1P19237 187 aa16.85■□□□□ 0.29
SCARF1-203ENST00000434376 TUBB4BP68371 445 aa16.85■□□□□ 0.29
SCARF1-203ENST00000434376 SETQ01105 290 aaPredicted RBP16.85■□□□□ 0.29
SCARF1-203ENST00000434376 NAB2Q15742 525 aa16.85■□□□□ 0.29
SCARF1-203ENST00000434376 ASTE1Q2TB18 679 aaPredicted RBP16.85■□□□□ 0.29
SCARF1-203ENST00000434376 WDR93Q6P2C0 686 aa16.85■□□□□ 0.29
SCARF1-203ENST00000434376 GADL1Q6ZQY3 521 aa16.85■□□□□ 0.29
SCARF1-203ENST00000434376 TAB3Q8N5C8 712 aaPredicted RBP16.85■□□□□ 0.29
SCARF1-203ENST00000434376 OTUD6BQ8N6M0 293 aa16.85■□□□□ 0.29
SCARF1-203ENST00000434376 METTL13Q8N6R0 699 aa16.85■□□□□ 0.29
SCARF1-203ENST00000434376 LNX1Q8TBB1 728 aaPredicted RBP16.85■□□□□ 0.29
SCARF1-203ENST00000434376 SLC35G2Q8TBE7 412 aa16.85■□□□□ 0.29
SCARF1-203ENST00000434376 CLEC4DQ8WXI8 215 aa16.85■□□□□ 0.29
SCARF1-203ENST00000434376 KAT2BQ92831 832 aa16.85■□□□□ 0.29
SCARF1-203ENST00000434376 ARL8AQ96BM9 186 aa16.85■□□□□ 0.29
SCARF1-203ENST00000434376 R3HDMLQ9H3Y0 253 aa16.85■□□□□ 0.29
SCARF1-203ENST00000434376 METTL14Q9HCE5 456 aaKnown RBP16.85■□□□□ 0.29
SCARF1-203ENST00000434376 DLEC1Q9Y238 1755 aa16.85■□□□□ 0.29
SCARF1-203ENST00000434376 MARCKSL1P49006 195 aa16.85■□□□□ 0.29
SCARF1-203ENST00000434376 BFSP1Q12934 665 aa16.85■□□□□ 0.29
SCARF1-203ENST00000434376 STXBP4Q6ZWJ1 553 aa16.85■□□□□ 0.29
SCARF1-203ENST00000434376 UBLCP1Q8WVY7 318 aaPredicted RBP16.85■□□□□ 0.29
SCARF1-203ENST00000434376 GLG1Q92896 1179 aa16.85■□□□□ 0.29
SCARF1-203ENST00000434376 KMT5AQ9NQR1 393 aa16.85■□□□□ 0.29
SCARF1-203ENST00000434376 SGPL1O95470 568 aa16.85■□□□□ 0.29
SCARF1-203ENST00000434376 MXI1P50539 228 aa16.85■□□□□ 0.29
SCARF1-203ENST00000434376 VAMP7P51809 220 aa16.85■□□□□ 0.29
SCARF1-203ENST00000434376 PGM5Q15124 567 aa16.85■□□□□ 0.29
SCARF1-203ENST00000434376 ZBTB33Q86T24 672 aa16.85■□□□□ 0.29
SCARF1-203ENST00000434376 TMEM130Q8N3G9 435 aa16.85■□□□□ 0.29
SCARF1-203ENST00000434376 ZBTB45Q96K62 511 aaPredicted RBP16.85■□□□□ 0.29
SCARF1-203ENST00000434376 PDCD2LQ9BRP1 358 aa16.85■□□□□ 0.29
SCARF1-203ENST00000434376 PPP1R9AQ9ULJ8 1098 aa16.85■□□□□ 0.29
SCARF1-203ENST00000434376 ZMYM2Q9UBW7 1377 aa16.84■□□□□ 0.29
SCARF1-203ENST00000434376 SSU72P8A0A1W2PR75 194 aa16.84■□□□□ 0.29
SCARF1-203ENST00000434376 MYO1FO00160 1098 aa16.84■□□□□ 0.29
SCARF1-203ENST00000434376 HSF2BPO75031 334 aa16.84■□□□□ 0.29
SCARF1-203ENST00000434376 FTLP02792 175 aaPredicted RBP16.84■□□□□ 0.29
SCARF1-203ENST00000434376 DHX9Q08211 1270 aaKnown RBP16.84■□□□□ 0.29
SCARF1-203ENST00000434376 RPUSD2Q8IZ73 545 aaKnown RBP16.84■□□□□ 0.29
SCARF1-203ENST00000434376 MBOAT7Q96N66 472 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms