RNA–Protein interactions for RNA: ENST00000434233.2

LINC00339-204, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best)

Gene LINC00339, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-204ENST00000434233 KIF20AO95235 890 aa13.57□□□□□ -0.24
LINC00339-204ENST00000434233 CHRNA1P02708 482 aa13.57□□□□□ -0.24
LINC00339-204ENST00000434233 CLTBP09497 229 aa13.57□□□□□ -0.24
LINC00339-204ENST00000434233 EIF4BP23588 611 aaKnown RBP13.57□□□□□ -0.24
LINC00339-204ENST00000434233 PPP1R2P41236 205 aa13.57□□□□□ -0.24
LINC00339-204ENST00000434233 PHKA2P46019 1235 aa13.57□□□□□ -0.24
LINC00339-204ENST00000434233 NLRP12P59046 1061 aa13.57□□□□□ -0.24
LINC00339-204ENST00000434233 TMEM62Q0P6H9 643 aa13.57□□□□□ -0.24
LINC00339-204ENST00000434233 PCBP1Q15365 356 aaKnown RBP eCLIP13.57□□□□□ -0.24
LINC00339-204ENST00000434233 KIZQ2M2Z5 673 aa13.57□□□□□ -0.24
LINC00339-204ENST00000434233 ZNF618Q5T7W0 954 aa13.57□□□□□ -0.24
LINC00339-204ENST00000434233 ISM2Q6H9L7 571 aa13.57□□□□□ -0.24
LINC00339-204ENST00000434233 SASS6Q6UVJ0 657 aa13.57□□□□□ -0.24
LINC00339-204ENST00000434233 STXBP4Q6ZWJ1 553 aa13.57□□□□□ -0.24
LINC00339-204ENST00000434233 EPM2AIP1Q7L775 607 aaPredicted RBP13.57□□□□□ -0.24
LINC00339-204ENST00000434233 NLRP7Q8WX94 980 aa13.57□□□□□ -0.24
LINC00339-204ENST00000434233 HPS3Q969F9 1004 aa13.57□□□□□ -0.24
LINC00339-204ENST00000434233 HVCN1Q96D96 273 aa13.57□□□□□ -0.24
LINC00339-204ENST00000434233 HTATIP2Q9BUP3 242 aa13.57□□□□□ -0.24
LINC00339-204ENST00000434233 CDHR5Q9HBB8 845 aa13.57□□□□□ -0.24
LINC00339-204ENST00000434233 TMEM39AQ9NV64 488 aa13.57□□□□□ -0.24
LINC00339-204ENST00000434233 CDY2AQ9Y6F7 541 aa13.57□□□□□ -0.24
LINC00339-204ENST00000434233 K7ENM7 598 aa13.56□□□□□ -0.24
LINC00339-204ENST00000434233 BIN1O00499 593 aa13.56□□□□□ -0.24
LINC00339-204ENST00000434233 EIF3DO15371 548 aaKnown RBP eCLIP13.56□□□□□ -0.24
LINC00339-204ENST00000434233 PPP1R37O75864 691 aa13.56□□□□□ -0.24
LINC00339-204ENST00000434233 GCNT3O95395 438 aa13.56□□□□□ -0.24
LINC00339-204ENST00000434233 PARNO95453 639 aaKnown RBP13.56□□□□□ -0.24
LINC00339-204ENST00000434233 DARSP14868 501 aaKnown RBP13.56□□□□□ -0.24
LINC00339-204ENST00000434233 SELPP16109 830 aa13.56□□□□□ -0.24
LINC00339-204ENST00000434233 BMP6P22004 513 aa13.56□□□□□ -0.24
LINC00339-204ENST00000434233 FAM187BQ17R55 369 aa13.56□□□□□ -0.24
LINC00339-204ENST00000434233 ZSCAN23Q3MJ62 389 aa13.56□□□□□ -0.24
LINC00339-204ENST00000434233 KIAA0895Q8NCT3 520 aa13.56□□□□□ -0.24
LINC00339-204ENST00000434233 ZNF668Q96K58 619 aaPredicted RBP13.56□□□□□ -0.24
LINC00339-204ENST00000434233 NOC4LQ9BVI4 516 aaKnown RBP13.56□□□□□ -0.24
LINC00339-204ENST00000434233 FZD8Q9H461 694 aa13.56□□□□□ -0.24
LINC00339-204ENST00000434233 TBX21Q9UL17 535 aa13.56□□□□□ -0.24
LINC00339-204ENST00000434233 DENND3A2RUS2 1198 aa13.55□□□□□ -0.24
LINC00339-204ENST00000434233 KIAA0355O15063 1070 aa13.55□□□□□ -0.24
LINC00339-204ENST00000434233 IQCF3P0C7M6 154 aa13.55□□□□□ -0.24
LINC00339-204ENST00000434233 MYBP10242 640 aa13.55□□□□□ -0.24
LINC00339-204ENST00000434233 MAPK6Q16659 721 aa13.55□□□□□ -0.24
LINC00339-204ENST00000434233 BMT2Q1RMZ1 405 aa13.55□□□□□ -0.24
LINC00339-204ENST00000434233 ZC2HC1CQ53FD0 456 aaPredicted RBP13.55□□□□□ -0.24
LINC00339-204ENST00000434233 CT47A1Q5JQC4 288 aaPredicted RBP13.55□□□□□ -0.24
LINC00339-204ENST00000434233 L1TD1Q5T7N2 865 aaKnown RBP13.55□□□□□ -0.24
LINC00339-204ENST00000434233 TRAF7Q6Q0C0 670 aa13.55□□□□□ -0.24
LINC00339-204ENST00000434233 FAM43BQ6ZT52 329 aaPredicted RBP13.55□□□□□ -0.24
LINC00339-204ENST00000434233 MYOCDQ8IZQ8 938 aa13.55□□□□□ -0.24
LINC00339-204ENST00000434233 GUF1Q8N442 669 aaKnown RBP13.55□□□□□ -0.24
LINC00339-204ENST00000434233 USP38Q8NB14 1042 aa13.55□□□□□ -0.24
LINC00339-204ENST00000434233 MLKLQ8NB16 471 aa13.55□□□□□ -0.24
LINC00339-204ENST00000434233 PRIMPOLQ96LW4 560 aa13.55□□□□□ -0.24
LINC00339-204ENST00000434233 SCLT1Q96NL6 688 aa13.55□□□□□ -0.24
LINC00339-204ENST00000434233 ACCSQ96QU6 501 aa13.55□□□□□ -0.24
LINC00339-204ENST00000434233 PPP1R16BQ96T49 567 aa13.55□□□□□ -0.24
LINC00339-204ENST00000434233 OSMRQ99650 979 aa13.55□□□□□ -0.24
LINC00339-204ENST00000434233 ANP32EQ9BTT0 268 aa13.55□□□□□ -0.24
LINC00339-204ENST00000434233 KIFC3Q9BVG8 833 aa13.55□□□□□ -0.24
LINC00339-204ENST00000434233 FGFBP2Q9BYJ0 223 aa13.55□□□□□ -0.24
LINC00339-204ENST00000434233 CCDC113Q9H0I3 377 aa13.55□□□□□ -0.24
LINC00339-204ENST00000434233 HIPK3Q9H422 1215 aa13.55□□□□□ -0.24
LINC00339-204ENST00000434233 TMEM206Q9H813 350 aa13.55□□□□□ -0.24
LINC00339-204ENST00000434233 PRMT7Q9NVM4 692 aaPredicted RBP13.55□□□□□ -0.24
LINC00339-204ENST00000434233 TBX20Q9UMR3 447 aa13.55□□□□□ -0.24
LINC00339-204ENST00000434233 GINS2Q9Y248 185 aa13.55□□□□□ -0.24
LINC00339-204ENST00000434233 GDAQ9Y2T3 454 aa13.55□□□□□ -0.24
LINC00339-204ENST00000434233 ADGRA3Q8IWK6 1321 aa13.55□□□□□ -0.24
LINC00339-204ENST00000434233 SYCE3A1L190 88 aa13.54□□□□□ -0.24
LINC00339-204ENST00000434233 PPP1R3GB7ZBB8 358 aa13.54□□□□□ -0.24
LINC00339-204ENST00000434233 INO80B-WBP1J3KQ70 363 aa13.54□□□□□ -0.24
LINC00339-204ENST00000434233 ACKR2O00590 384 aa13.54□□□□□ -0.24
LINC00339-204ENST00000434233 PRPF6O94906 941 aaKnown RBP13.54□□□□□ -0.24
LINC00339-204ENST00000434233 CTSHP09668 335 aa13.54□□□□□ -0.24
LINC00339-204ENST00000434233 PRCPP42785 496 aa13.54□□□□□ -0.24
LINC00339-204ENST00000434233 CASP5P51878 434 aa13.54□□□□□ -0.24
LINC00339-204ENST00000434233 MBTD1Q05BQ5 628 aa13.54□□□□□ -0.24
LINC00339-204ENST00000434233 STRN3Q13033 797 aa13.54□□□□□ -0.24
LINC00339-204ENST00000434233 STIM1Q13586 685 aa13.54□□□□□ -0.24
LINC00339-204ENST00000434233 FBXO47Q5MNV8 452 aa13.54□□□□□ -0.24
LINC00339-204ENST00000434233 LRRC8DQ7L1W4 858 aa13.54□□□□□ -0.24
LINC00339-204ENST00000434233 TAS1R3Q7RTX0 852 aa13.54□□□□□ -0.24
LINC00339-204ENST00000434233 ADSSL1Q8N142 457 aa13.54□□□□□ -0.24
LINC00339-204ENST00000434233 GLIS3Q8NEA6 775 aa13.54□□□□□ -0.24
LINC00339-204ENST00000434233 SCFD1Q8WVM8 642 aa13.54□□□□□ -0.24
LINC00339-204ENST00000434233 DHTKD1Q96HY7 919 aaPredicted RBP13.54□□□□□ -0.24
LINC00339-204ENST00000434233 FUCA2Q9BTY2 467 aa13.54□□□□□ -0.24
LINC00339-204ENST00000434233 MINDY3Q9H8M7 445 aa13.54□□□□□ -0.24
LINC00339-204ENST00000434233 ANO10Q9NW15 660 aa13.54□□□□□ -0.24
LINC00339-204ENST00000434233 EXOC7Q9UPT5 735 aa13.54□□□□□ -0.24
LINC00339-204ENST00000434233 UBE4BO95155 1302 aa13.54□□□□□ -0.24
LINC00339-204ENST00000434233 TRIM43BA6NCK2 446 aa13.53□□□□□ -0.24
LINC00339-204ENST00000434233 GPR182O15218 404 aa13.53□□□□□ -0.24
LINC00339-204ENST00000434233 RPS6KA5O75582 802 aa13.53□□□□□ -0.24
LINC00339-204ENST00000434233 TIMP1P01033 207 aa13.53□□□□□ -0.24
LINC00339-204ENST00000434233 PRKCBP05771 671 aa13.53□□□□□ -0.24
LINC00339-204ENST00000434233 CCDC192P0DO97 292 aa13.53□□□□□ -0.24
LINC00339-204ENST00000434233 SFPQP23246 707 aaKnown RBP eCLIP13.53□□□□□ -0.24
LINC00339-204ENST00000434233 AXLP30530 894 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms