RNA–Protein interactions for RNA: ENST00000433661.1

PTP4A1P3-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 3, humanhuman

BASIC

Gene PTP4A1P3, Length 420 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P3-201ENST00000433661 NOX5Q96PH1 765 aa6.74□□□□□ -1.33
PTP4A1P3-201ENST00000433661 FAM193BQ96PV7 902 aaPredicted RBP6.74□□□□□ -1.33
PTP4A1P3-201ENST00000433661 DIRC2Q96SL1 478 aa6.74□□□□□ -1.33
PTP4A1P3-201ENST00000433661 GTPBP4Q9BZE4 634 aaKnown RBP6.74□□□□□ -1.33
PTP4A1P3-201ENST00000433661 KATNBL1Q9H079 304 aa6.74□□□□□ -1.33
PTP4A1P3-201ENST00000433661 SAE1Q9UBE0 346 aaPredicted RBP6.74□□□□□ -1.33
PTP4A1P3-201ENST00000433661 SAP30BPQ9UHR5 308 aaKnown RBP6.74□□□□□ -1.33
PTP4A1P3-201ENST00000433661 SERPINB13Q9UIV8 391 aa6.74□□□□□ -1.33
PTP4A1P3-201ENST00000433661 SH3D21A4FU49 640 aa6.73□□□□□ -1.33
PTP4A1P3-201ENST00000433661 LRRC10BA6NIK2 292 aa6.73□□□□□ -1.33
PTP4A1P3-201ENST00000433661 FAM171A2A8MVW0 826 aa6.73□□□□□ -1.33
PTP4A1P3-201ENST00000433661 DTNBO60941 627 aa6.73□□□□□ -1.33
PTP4A1P3-201ENST00000433661 FSBPO95073 299 aa6.73□□□□□ -1.33
PTP4A1P3-201ENST00000433661 PHKG2P15735 406 aa6.73□□□□□ -1.33
PTP4A1P3-201ENST00000433661 PDCP20941 246 aa6.73□□□□□ -1.33
PTP4A1P3-201ENST00000433661 EDNRBP24530 442 aa6.73□□□□□ -1.33
PTP4A1P3-201ENST00000433661 GLRBP48167 497 aa6.73□□□□□ -1.33
PTP4A1P3-201ENST00000433661 NCKAP1LP55160 1127 aa6.73□□□□□ -1.33
PTP4A1P3-201ENST00000433661 ANTXR2P58335 489 aa6.73□□□□□ -1.33
PTP4A1P3-201ENST00000433661 PPP3CAQ08209 521 aa6.73□□□□□ -1.33
PTP4A1P3-201ENST00000433661 UBE4AQ14139 1066 aa6.73□□□□□ -1.33
PTP4A1P3-201ENST00000433661 WDR72Q3MJ13 1102 aa6.73□□□□□ -1.33
PTP4A1P3-201ENST00000433661 IFIT1BQ5T764 474 aaKnown RBP6.73□□□□□ -1.33
PTP4A1P3-201ENST00000433661 KLHDC10Q6PID8 442 aa6.73□□□□□ -1.33
PTP4A1P3-201ENST00000433661 SRGAP1Q7Z6B7 1085 aa6.73□□□□□ -1.33
PTP4A1P3-201ENST00000433661 FAM129CQ86XR2 697 aa6.73□□□□□ -1.33
PTP4A1P3-201ENST00000433661 GLB1L3Q8NCI6 653 aaPredicted RBP6.73□□□□□ -1.33
PTP4A1P3-201ENST00000433661 FNIP1Q8TF40 1166 aa6.73□□□□□ -1.33
PTP4A1P3-201ENST00000433661 DIS3LQ8TF46 1054 aaKnown RBP6.73□□□□□ -1.33
PTP4A1P3-201ENST00000433661 ZCCHC14Q8WYQ9 949 aaKnown RBP6.73□□□□□ -1.33
PTP4A1P3-201ENST00000433661 LPPQ93052 612 aa6.73□□□□□ -1.33
PTP4A1P3-201ENST00000433661 TTC17Q96AE7 1141 aa6.73□□□□□ -1.33
PTP4A1P3-201ENST00000433661 SLC39A13Q96H72 371 aa6.73□□□□□ -1.33
PTP4A1P3-201ENST00000433661 SARGQ9BW04 601 aa6.73□□□□□ -1.33
PTP4A1P3-201ENST00000433661 RBM12Q9NTZ6 932 aaKnown RBP6.73□□□□□ -1.33
PTP4A1P3-201ENST00000433661 HTRA2O43464 458 aaPredicted RBP6.72□□□□□ -1.33
PTP4A1P3-201ENST00000433661 SGTAO43765 313 aa6.72□□□□□ -1.33
PTP4A1P3-201ENST00000433661 TMEM127O75204 238 aa6.72□□□□□ -1.33
PTP4A1P3-201ENST00000433661 MAP4K4O95819 1239 aaPredicted RBP6.72□□□□□ -1.33
PTP4A1P3-201ENST00000433661 PLA2G1BP04054 148 aaKnown RBP6.72□□□□□ -1.33
PTP4A1P3-201ENST00000433661 KIF23Q02241 960 aaPredicted RBP6.72□□□□□ -1.33
PTP4A1P3-201ENST00000433661 MESP2Q0VG99 397 aa6.72□□□□□ -1.33
PTP4A1P3-201ENST00000433661 MLANAQ16655 118 aa6.72□□□□□ -1.33
PTP4A1P3-201ENST00000433661 MAP9Q49MG5 647 aa6.72□□□□□ -1.33
PTP4A1P3-201ENST00000433661 TMEM132EQ6IEE7 984 aa6.72□□□□□ -1.33
PTP4A1P3-201ENST00000433661 FAM180AQ6UWF9 173 aa6.72□□□□□ -1.33
PTP4A1P3-201ENST00000433661 GFM2Q969S9 779 aaKnown RBP6.72□□□□□ -1.33
PTP4A1P3-201ENST00000433661 MVB12AQ96EY5 273 aa6.72□□□□□ -1.33
PTP4A1P3-201ENST00000433661 AJUBAQ96IF1 538 aa6.72□□□□□ -1.33
PTP4A1P3-201ENST00000433661 WDR92Q96MX6 357 aa6.72□□□□□ -1.33
PTP4A1P3-201ENST00000433661 SLC2A13Q96QE2 648 aa6.72□□□□□ -1.33
PTP4A1P3-201ENST00000433661 SYT3Q9BQG1 590 aa6.72□□□□□ -1.33
PTP4A1P3-201ENST00000433661 SPATA6Q9NWH7 488 aaPredicted RBP6.72□□□□□ -1.33
PTP4A1P3-201ENST00000433661 USP18Q9UMW8 372 aa6.72□□□□□ -1.33
PTP4A1P3-201ENST00000433661 CFAP20Q9Y6A4 193 aaKnown RBP6.72□□□□□ -1.33
PTP4A1P3-201ENST00000433661 PMF1-BGLAPU3KQ54 211 aa6.72□□□□□ -1.33
PTP4A1P3-201ENST00000433661 MTSS1O43312 755 aa6.71□□□□□ -1.34
PTP4A1P3-201ENST00000433661 PHF2O75151 1096 aa6.71□□□□□ -1.34
PTP4A1P3-201ENST00000433661 LTA4HP09960 611 aaKnown RBP6.71□□□□□ -1.34
PTP4A1P3-201ENST00000433661 MLLT6P55198 1093 aaPredicted RBP6.71□□□□□ -1.34
PTP4A1P3-201ENST00000433661 WNT3AP56704 352 aa6.71□□□□□ -1.34
PTP4A1P3-201ENST00000433661 CDK17Q00537 523 aa6.71□□□□□ -1.34
PTP4A1P3-201ENST00000433661 VWA3BQ502W6 1294 aa6.71□□□□□ -1.34
PTP4A1P3-201ENST00000433661 LMBR1LQ6UX01 489 aa6.71□□□□□ -1.34
PTP4A1P3-201ENST00000433661 C11orf96Q7Z7L8 435 aa6.71□□□□□ -1.34
PTP4A1P3-201ENST00000433661 MARCH10Q8NA82 808 aaPredicted RBP6.71□□□□□ -1.34
PTP4A1P3-201ENST00000433661 GPR156Q8NFN8 814 aa6.71□□□□□ -1.34
PTP4A1P3-201ENST00000433661 ZBTB8AQ96BR9 441 aa6.71□□□□□ -1.34
PTP4A1P3-201ENST00000433661 YTHDC1Q96MU7 727 aaKnown RBP6.71□□□□□ -1.34
PTP4A1P3-201ENST00000433661 MAP3K14Q99558 947 aa6.71□□□□□ -1.34
PTP4A1P3-201ENST00000433661 TMEM60Q9H2L4 133 aa6.71□□□□□ -1.34
PTP4A1P3-201ENST00000433661 EPB41L4AQ9HCS5 686 aaPredicted RBP6.71□□□□□ -1.34
PTP4A1P3-201ENST00000433661 ANO9A1A5B4 782 aa6.7□□□□□ -1.34
PTP4A1P3-201ENST00000433661 C9orf118A6NHY6 69 aa6.7□□□□□ -1.34
PTP4A1P3-201ENST00000433661 SLC16A6O15403 523 aa6.7□□□□□ -1.34
PTP4A1P3-201ENST00000433661 AP1G1O43747 822 aa6.7□□□□□ -1.34
PTP4A1P3-201ENST00000433661 PLIN1O60240 522 aa6.7□□□□□ -1.34
PTP4A1P3-201ENST00000433661 LY86O95711 162 aa6.7□□□□□ -1.34
PTP4A1P3-201ENST00000433661 GAAP10253 952 aa6.7□□□□□ -1.34
PTP4A1P3-201ENST00000433661 TAL1P17542 331 aaPredicted RBP6.7□□□□□ -1.34
PTP4A1P3-201ENST00000433661 IL13P35225 146 aa6.7□□□□□ -1.34
PTP4A1P3-201ENST00000433661 GALEQ14376 348 aa6.7□□□□□ -1.34
PTP4A1P3-201ENST00000433661 TAS1R1Q7RTX1 841 aa6.7□□□□□ -1.34
PTP4A1P3-201ENST00000433661 IFNL2Q8IZJ0 200 aa6.7□□□□□ -1.34
PTP4A1P3-201ENST00000433661 HDAC10Q969S8 669 aa6.7□□□□□ -1.34
PTP4A1P3-201ENST00000433661 PTPN18Q99952 460 aa6.7□□□□□ -1.34
PTP4A1P3-201ENST00000433661 SGPP1Q9BX95 441 aa6.7□□□□□ -1.34
PTP4A1P3-201ENST00000433661 MAN1C1Q9NR34 630 aa6.7□□□□□ -1.34
PTP4A1P3-201ENST00000433661 LIMCH1Q9UPQ0 1083 aa6.7□□□□□ -1.34
PTP4A1P3-201ENST00000433661 IRAK3Q9Y616 596 aa6.7□□□□□ -1.34
PTP4A1P3-201ENST00000433661 RPTORQ8N122 1335 aa6.7□□□□□ -1.34
PTP4A1P3-201ENST00000433661 TUSC2O75896 110 aa6.69□□□□□ -1.34
PTP4A1P3-201ENST00000433661 ZBED1O96006 694 aa6.69□□□□□ -1.34
PTP4A1P3-201ENST00000433661 KRT1P04264 644 aa6.69□□□□□ -1.34
PTP4A1P3-201ENST00000433661 CTSSP25774 331 aa6.69□□□□□ -1.34
PTP4A1P3-201ENST00000433661 LIMS1P48059 325 aa6.69□□□□□ -1.34
PTP4A1P3-201ENST00000433661 FXR1P51114 621 aaKnown RBP eCLIP6.69□□□□□ -1.34
PTP4A1P3-201ENST00000433661 GRM3Q14832 879 aa6.69□□□□□ -1.34
PTP4A1P3-201ENST00000433661 MST1LQ2TV78 715 aa6.69□□□□□ -1.34
PTP4A1P3-201ENST00000433661 PGS1Q32NB8 556 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms