RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 PBX4Q9BYU1 374 aa17.15■□□□□ 0.34
TREX1-201ENST00000433541 TSPYL2Q9H2G4 693 aaPredicted RBP17.15■□□□□ 0.34
TREX1-201ENST00000433541 TMX1Q9H3N1 280 aa17.15■□□□□ 0.34
TREX1-201ENST00000433541 KMT5AQ9NQR1 393 aa17.15■□□□□ 0.34
TREX1-201ENST00000433541 C1orf112Q9NSG2 853 aa17.15■□□□□ 0.34
TREX1-201ENST00000433541 RNF216Q9NWF9 866 aaPredicted RBP17.15■□□□□ 0.34
TREX1-201ENST00000433541 DACT1Q9NYF0 836 aa17.15■□□□□ 0.34
TREX1-201ENST00000433541 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.14■□□□□ 0.33
TREX1-201ENST00000433541 PBX2P40425 430 aa17.14■□□□□ 0.33
TREX1-201ENST00000433541 SMTNP53814 917 aa17.14■□□□□ 0.33
TREX1-201ENST00000433541 AXDND1Q5T1B0 1012 aaPredicted RBP17.14■□□□□ 0.33
TREX1-201ENST00000433541 SLC24A5Q71RS6 500 aa17.14■□□□□ 0.33
TREX1-201ENST00000433541 DYMQ7RTS9 669 aa17.14■□□□□ 0.33
TREX1-201ENST00000433541 IQUBQ8NA54 791 aa17.14■□□□□ 0.33
TREX1-201ENST00000433541 TIFAQ96CG3 184 aa17.14■□□□□ 0.33
TREX1-201ENST00000433541 REEP2Q9BRK0 252 aa17.14■□□□□ 0.33
TREX1-201ENST00000433541 KIFC3Q9BVG8 833 aa17.14■□□□□ 0.33
TREX1-201ENST00000433541 MINDY3Q9H8M7 445 aa17.14■□□□□ 0.33
TREX1-201ENST00000433541 SLC28A3Q9HAS3 691 aa17.14■□□□□ 0.33
TREX1-201ENST00000433541 LARSQ9P2J5 1176 aaKnown RBP17.14■□□□□ 0.33
TREX1-201ENST00000433541 PCDHB7Q9Y5E2 793 aa17.14■□□□□ 0.33
TREX1-201ENST00000433541 PCDHA11Q9Y5I1 949 aa17.14■□□□□ 0.33
TREX1-201ENST00000433541 A0A087X0B3 334 aa17.13■□□□□ 0.33
TREX1-201ENST00000433541 POLR2DO15514 142 aaKnown RBP17.13■□□□□ 0.33
TREX1-201ENST00000433541 GJB5O95377 273 aa17.13■□□□□ 0.33
TREX1-201ENST00000433541 MYOGP15173 224 aa17.13■□□□□ 0.33
TREX1-201ENST00000433541 SARSP49591 514 aaKnown RBP17.13■□□□□ 0.33
TREX1-201ENST00000433541 POU5F1BQ06416 359 aa17.13■□□□□ 0.33
TREX1-201ENST00000433541 MAPK6Q16659 721 aa17.13■□□□□ 0.33
TREX1-201ENST00000433541 ZNF697Q5TEC3 545 aa17.13■□□□□ 0.33
TREX1-201ENST00000433541 RESP18Q5W5W9 173 aa17.13■□□□□ 0.33
TREX1-201ENST00000433541 PPP2R2DQ66LE6 453 aa17.13■□□□□ 0.33
TREX1-201ENST00000433541 NPAS4Q8IUM7 802 aa17.13■□□□□ 0.33
TREX1-201ENST00000433541 CEP57L1Q8IYX8 460 aa17.13■□□□□ 0.33
TREX1-201ENST00000433541 MYCT1Q8N699 235 aa17.13■□□□□ 0.33
TREX1-201ENST00000433541 LRRC15Q8TF66 581 aa17.13■□□□□ 0.33
TREX1-201ENST00000433541 LINC01599Q8WXQ3 324 aa17.13■□□□□ 0.33
TREX1-201ENST00000433541 TOP1MTQ969P6 601 aa17.13■□□□□ 0.33
TREX1-201ENST00000433541 PYM1Q9BRP8 204 aaKnown RBP17.13■□□□□ 0.33
TREX1-201ENST00000433541 TRIM6Q9C030 488 aaPredicted RBP17.13■□□□□ 0.33
TREX1-201ENST00000433541 NKX2-4Q9H2Z4 354 aa17.13■□□□□ 0.33
TREX1-201ENST00000433541 RGS18Q9NS28 235 aa17.13■□□□□ 0.33
TREX1-201ENST00000433541 AGPAT5Q9NUQ2 364 aa17.13■□□□□ 0.33
TREX1-201ENST00000433541 PRMT7Q9NVM4 692 aaPredicted RBP17.13■□□□□ 0.33
TREX1-201ENST00000433541 ODF2LQ9ULJ1 636 aa17.13■□□□□ 0.33
TREX1-201ENST00000433541 MYO9BQ13459 2157 aa17.13■□□□□ 0.33
TREX1-201ENST00000433541 NLRC5Q86WI3 1866 aa17.12■□□□□ 0.33
TREX1-201ENST00000433541 A0A1B0GVL5 298 aa17.12■□□□□ 0.33
TREX1-201ENST00000433541 K7ERI5 159 aa17.12■□□□□ 0.33
TREX1-201ENST00000433541 SLC16A4O15374 487 aa17.12■□□□□ 0.33
TREX1-201ENST00000433541 PRKCBP05771 671 aa17.12■□□□□ 0.33
TREX1-201ENST00000433541 CA3P07451 260 aa17.12■□□□□ 0.33
TREX1-201ENST00000433541 PLS3P13797 630 aa17.12■□□□□ 0.33
TREX1-201ENST00000433541 IDEP14735 1019 aa17.12■□□□□ 0.33
TREX1-201ENST00000433541 NPTX2P47972 431 aa17.12■□□□□ 0.33
TREX1-201ENST00000433541 FXR1P51114 621 aaKnown RBP eCLIP17.12■□□□□ 0.33
TREX1-201ENST00000433541 EFNA5P52803 228 aa17.12■□□□□ 0.33
TREX1-201ENST00000433541 MBTD1Q05BQ5 628 aa17.12■□□□□ 0.33
TREX1-201ENST00000433541 PRPF4BQ13523 1007 aaKnown RBP17.12■□□□□ 0.33
TREX1-201ENST00000433541 PCBP1Q15365 356 aaKnown RBP eCLIP17.12■□□□□ 0.33
TREX1-201ENST00000433541 CSPP1Q1MSJ5 1256 aa17.12■□□□□ 0.33
TREX1-201ENST00000433541 ARSHQ5FYA8 562 aa17.12■□□□□ 0.33
TREX1-201ENST00000433541 ADALQ6DHV7 355 aa17.12■□□□□ 0.33
TREX1-201ENST00000433541 NOTUMQ6P988 496 aa17.12■□□□□ 0.33
TREX1-201ENST00000433541 FAM43BQ6ZT52 329 aaPredicted RBP17.12■□□□□ 0.33
TREX1-201ENST00000433541 RTN4RL1Q86UN2 441 aaPredicted RBP17.12■□□□□ 0.33
TREX1-201ENST00000433541 STAMQ92783 540 aa17.12■□□□□ 0.33
TREX1-201ENST00000433541 CPB2Q96IY4 423 aa17.12■□□□□ 0.33
TREX1-201ENST00000433541 IPO9Q96P70 1041 aaKnown RBP17.12■□□□□ 0.33
TREX1-201ENST00000433541 RAD9AQ99638 391 aa17.12■□□□□ 0.33
TREX1-201ENST00000433541 NFKBIZQ9BYH8 718 aa17.12■□□□□ 0.33
TREX1-201ENST00000433541 LRRC27Q9C0I9 530 aa17.12■□□□□ 0.33
TREX1-201ENST00000433541 CUEDC2Q9H467 287 aa17.12■□□□□ 0.33
TREX1-201ENST00000433541 C17orf75Q9HAS0 396 aa17.12■□□□□ 0.33
TREX1-201ENST00000433541 CHST12Q9NRB3 414 aa17.12■□□□□ 0.33
TREX1-201ENST00000433541 KCNG1Q9UIX4 513 aa17.12■□□□□ 0.33
TREX1-201ENST00000433541 KCNH3Q9ULD8 1083 aa17.12■□□□□ 0.33
TREX1-201ENST00000433541 INSL6Q9Y581 213 aa17.12■□□□□ 0.33
TREX1-201ENST00000433541 K7ENM7 598 aa17.11■□□□□ 0.33
TREX1-201ENST00000433541 TSPAN1O60635 241 aa17.11■□□□□ 0.33
TREX1-201ENST00000433541 SKIP12755 728 aa17.11■□□□□ 0.33
TREX1-201ENST00000433541 PFKFB1P16118 471 aa17.11■□□□□ 0.33
TREX1-201ENST00000433541 AXLP30530 894 aa17.11■□□□□ 0.33
TREX1-201ENST00000433541 AMPD3Q01432 767 aa17.11■□□□□ 0.33
TREX1-201ENST00000433541 STRN3Q13033 797 aa17.11■□□□□ 0.33
TREX1-201ENST00000433541 MAPK7Q13164 816 aa17.11■□□□□ 0.33
TREX1-201ENST00000433541 LONRF3Q496Y0 759 aa17.11■□□□□ 0.33
TREX1-201ENST00000433541 PAN2Q504Q3 1202 aaKnown RBP17.11■□□□□ 0.33
TREX1-201ENST00000433541 CDCA2Q69YH5 1023 aaPredicted RBP17.11■□□□□ 0.33
TREX1-201ENST00000433541 IFNLR1Q8IU57 520 aaPredicted RBP17.11■□□□□ 0.33
TREX1-201ENST00000433541 ABI1Q8IZP0 508 aa17.11■□□□□ 0.33
TREX1-201ENST00000433541 DAW1Q8N136 415 aa17.11■□□□□ 0.33
TREX1-201ENST00000433541 FSIP1Q8NA03 581 aa17.11■□□□□ 0.33
TREX1-201ENST00000433541 DDX12PQ92771 950 aa17.11■□□□□ 0.33
TREX1-201ENST00000433541 FAM161BQ96MY7 647 aa17.11■□□□□ 0.33
TREX1-201ENST00000433541 PARVGQ9HBI0 331 aa17.11■□□□□ 0.33
TREX1-201ENST00000433541 YBX2Q9Y2T7 364 aaKnown RBP17.11■□□□□ 0.33
TREX1-201ENST00000433541 FNDC1Q4ZHG4 1894 aaPredicted RBP17.1■□□□□ 0.33
TREX1-201ENST00000433541 B4GALT5O43286 388 aa17.1■□□□□ 0.33
TREX1-201ENST00000433541 CMA1P23946 247 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms