RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 CDCA2Q69YH5 1023 aaPredicted RBP29.11■■■□□ 2.25
TMEM248-205ENST00000433271 ANKRD40Q6AI12 368 aa29.11■■■□□ 2.25
TMEM248-205ENST00000433271 TTI2Q6NXR4 508 aa29.11■■■□□ 2.25
TMEM248-205ENST00000433271 SLC43A3Q8NBI5 491 aa29.11■■■□□ 2.25
TMEM248-205ENST00000433271 ACCSQ96QU6 501 aa29.11■■■□□ 2.25
TMEM248-205ENST00000433271 TRIP12Q14669 1992 aaPredicted RBP29.1■■■□□ 2.25
TMEM248-205ENST00000433271 A0A0U1RQG5 324 aaPredicted RBP29.1■■■□□ 2.25
TMEM248-205ENST00000433271 VTNP04004 478 aa29.1■■■□□ 2.25
TMEM248-205ENST00000433271 NME8Q8N427 588 aa29.1■■■□□ 2.25
TMEM248-205ENST00000433271 NLRP4Q96MN2 994 aa29.1■■■□□ 2.25
TMEM248-205ENST00000433271 SEZ6LQ9BYH1 1024 aa29.1■■■□□ 2.25
TMEM248-205ENST00000433271 NFKBIZQ9BYH8 718 aa29.1■■■□□ 2.25
TMEM248-205ENST00000433271 FAM49AQ9H0Q0 323 aaPredicted RBP29.1■■■□□ 2.25
TMEM248-205ENST00000433271 TMEM134Q9H6X4 195 aa29.1■■■□□ 2.25
TMEM248-205ENST00000433271 TRIM49BA6NDI0 452 aa29.09■■■□□ 2.25
TMEM248-205ENST00000433271 GOLGA6L19H0YKK7 550 aa29.09■■■□□ 2.25
TMEM248-205ENST00000433271 PDXKO00764 312 aa29.09■■■□□ 2.25
TMEM248-205ENST00000433271 ZCWPW2Q504Y3 356 aa29.09■■■□□ 2.25
TMEM248-205ENST00000433271 DNAJB3Q8WWF6 145 aa29.09■■■□□ 2.25
TMEM248-205ENST00000433271 C2orf40Q9H1Z8 148 aa29.09■■■□□ 2.25
TMEM248-205ENST00000433271 NFE2L3Q9Y4A8 694 aa29.09■■■□□ 2.25
TMEM248-205ENST00000433271 K7ERI5 159 aa29.09■■■□□ 2.25
TMEM248-205ENST00000433271 PTENP60484 403 aa29.09■■■□□ 2.25
TMEM248-205ENST00000433271 PPP4R3CPQ6ZMV5 832 aa29.09■■■□□ 2.25
TMEM248-205ENST00000433271 SERINC5Q86VE9 423 aa29.09■■■□□ 2.25
TMEM248-205ENST00000433271 MAP4K3Q8IVH8 894 aa29.09■■■□□ 2.25
TMEM248-205ENST00000433271 ZBTB8OSQ8IWT0 167 aa29.09■■■□□ 2.25
TMEM248-205ENST00000433271 SYCP3Q8IZU3 236 aa29.09■■■□□ 2.25
TMEM248-205ENST00000433271 ZNF710Q8N1W2 664 aa29.09■■■□□ 2.25
TMEM248-205ENST00000433271 TSG101Q99816 390 aa29.09■■■□□ 2.25
TMEM248-205ENST00000433271 TYW1Q9NV66 732 aaKnown RBP29.09■■■□□ 2.25
TMEM248-205ENST00000433271 EXOC7Q9UPT5 735 aa29.09■■■□□ 2.25
TMEM248-205ENST00000433271 TRAF3IP3Q9Y228 551 aa29.09■■■□□ 2.25
TMEM248-205ENST00000433271 BRCA2P51587 3418 aa29.09■■■□□ 2.25
TMEM248-205ENST00000433271 PHLPP2Q6ZVD8 1323 aa29.08■■■□□ 2.25
TMEM248-205ENST00000433271 GJA8P48165 433 aa29.08■■■□□ 2.25
TMEM248-205ENST00000433271 GPC3P51654 580 aa29.08■■■□□ 2.25
TMEM248-205ENST00000433271 PTGISQ16647 500 aa29.08■■■□□ 2.25
TMEM248-205ENST00000433271 TAS1R3Q7RTX0 852 aa29.08■■■□□ 2.25
TMEM248-205ENST00000433271 ZNF410Q86VK4 478 aa29.08■■■□□ 2.25
TMEM248-205ENST00000433271 MCOLN1Q9GZU1 580 aa29.08■■■□□ 2.25
TMEM248-205ENST00000433271 GBP3Q9H0R5 595 aa29.08■■■□□ 2.25
TMEM248-205ENST00000433271 IFT122Q9HBG6 1241 aa29.08■■■□□ 2.25
TMEM248-205ENST00000433271 ZMYM2Q9UBW7 1377 aa29.07■■■□□ 2.24
TMEM248-205ENST00000433271 ARVCFO00192 962 aa29.07■■■□□ 2.24
TMEM248-205ENST00000433271 TGFB1I1O43294 461 aa29.07■■■□□ 2.24
TMEM248-205ENST00000433271 RPLP2P05387 115 aaKnown RBP29.07■■■□□ 2.24
TMEM248-205ENST00000433271 PHKA2P46019 1235 aa29.07■■■□□ 2.24
TMEM248-205ENST00000433271 NLRP11P59045 1033 aaKnown RBP29.07■■■□□ 2.24
TMEM248-205ENST00000433271 IFNLR1Q8IU57 520 aaPredicted RBP29.07■■■□□ 2.24
TMEM248-205ENST00000433271 CTAGE1Q96RT6 745 aa29.07■■■□□ 2.24
TMEM248-205ENST00000433271 DUSP9Q99956 384 aaKnown RBP29.07■■■□□ 2.24
TMEM248-205ENST00000433271 A0A087WZ62 844 aa29.06■■■□□ 2.24
TMEM248-205ENST00000433271 STRN3Q13033 797 aa29.06■■■□□ 2.24
TMEM248-205ENST00000433271 TPD52L1Q16890 204 aaPredicted RBP29.06■■■□□ 2.24
TMEM248-205ENST00000433271 UVSSAQ2YD98 709 aa29.06■■■□□ 2.24
TMEM248-205ENST00000433271 EDRF1Q3B7T1 1238 aa29.06■■■□□ 2.24
TMEM248-205ENST00000433271 GOLGA5Q8TBA6 731 aa29.06■■■□□ 2.24
TMEM248-205ENST00000433271 NLRP7Q8WX94 980 aa29.06■■■□□ 2.24
TMEM248-205ENST00000433271 ZNF668Q96K58 619 aaPredicted RBP29.06■■■□□ 2.24
TMEM248-205ENST00000433271 FDXACB1Q9BRP7 624 aaPredicted RBP29.06■■■□□ 2.24
TMEM248-205ENST00000433271 ADAMTS10Q9H324 1103 aa29.06■■■□□ 2.24
TMEM248-205ENST00000433271 GRPEL1Q9HAV7 217 aa29.06■■■□□ 2.24
TMEM248-205ENST00000433271 FANCLQ9NW38 375 aa29.06■■■□□ 2.24
TMEM248-205ENST00000433271 DNAH12Q6ZR08 3092 aa29.06■■■□□ 2.24
TMEM248-205ENST00000433271 CALUO43852 315 aaPredicted RBP29.05■■■□□ 2.24
TMEM248-205ENST00000433271 GPR32O75388 356 aa29.05■■■□□ 2.24
TMEM248-205ENST00000433271 MNX1P50219 401 aaPredicted RBP29.05■■■□□ 2.24
TMEM248-205ENST00000433271 TPM4P67936 248 aa29.05■■■□□ 2.24
TMEM248-205ENST00000433271 HS2ST1Q7LGA3 356 aa29.05■■■□□ 2.24
TMEM248-205ENST00000433271 RPAINQ86UA6 219 aa29.05■■■□□ 2.24
TMEM248-205ENST00000433271 RSPH3Q86UC2 560 aa29.05■■■□□ 2.24
TMEM248-205ENST00000433271 CSGALNACT2Q8N6G5 542 aa29.05■■■□□ 2.24
TMEM248-205ENST00000433271 CCDC113Q9H0I3 377 aa29.05■■■□□ 2.24
TMEM248-205ENST00000433271 CAPN2P17655 700 aa29.05■■■□□ 2.24
TMEM248-205ENST00000433271 SNRPFP62306 86 aaKnown RBP29.05■■■□□ 2.24
TMEM248-205ENST00000433271 SCLT1Q96NL6 688 aa29.05■■■□□ 2.24
TMEM248-205ENST00000433271 HSD3B7Q9H2F3 369 aa29.05■■■□□ 2.24
TMEM248-205ENST00000433271 CGNQ9P2M7 1197 aaKnown RBP29.05■■■□□ 2.24
TMEM248-205ENST00000433271 CDK7P50613 346 aa29.04■■■□□ 2.24
TMEM248-205ENST00000433271 FKBP3Q00688 224 aaKnown RBP29.04■■■□□ 2.24
TMEM248-205ENST00000433271 MAPK6Q16659 721 aa29.04■■■□□ 2.24
TMEM248-205ENST00000433271 KIZQ2M2Z5 673 aa29.04■■■□□ 2.24
TMEM248-205ENST00000433271 ANKLE1Q8NAG6 615 aa29.04■■■□□ 2.24
TMEM248-205ENST00000433271 PPP1R16BQ96T49 567 aa29.04■■■□□ 2.24
TMEM248-205ENST00000433271 TMEM106CQ9BVX2 250 aa29.04■■■□□ 2.24
TMEM248-205ENST00000433271 IKZF4Q9H2S9 585 aa29.04■■■□□ 2.24
TMEM248-205ENST00000433271 TRMT13Q9NUP7 481 aaKnown RBP29.04■■■□□ 2.24
TMEM248-205ENST00000433271 NOD1Q9Y239 953 aa29.04■■■□□ 2.24
TMEM248-205ENST00000433271 MBTD1Q05BQ5 628 aa29.03■■■□□ 2.24
TMEM248-205ENST00000433271 TMEM62Q0P6H9 643 aa29.03■■■□□ 2.24
TMEM248-205ENST00000433271 PTK7Q13308 1070 aa29.03■■■□□ 2.24
TMEM248-205ENST00000433271 NOC3LQ8WTT2 800 aaKnown RBP29.03■■■□□ 2.24
TMEM248-205ENST00000433271 SRRTQ9BXP5 876 aaKnown RBP29.03■■■□□ 2.24
TMEM248-205ENST00000433271 FZD8Q9H461 694 aa29.03■■■□□ 2.24
TMEM248-205ENST00000433271 SAMSN1Q9NSI8 373 aaKnown RBP29.03■■■□□ 2.24
TMEM248-205ENST00000433271 FGFR1OPO95684 399 aaKnown RBP29.02■■■□□ 2.24
TMEM248-205ENST00000433271 MRE11P49959 708 aa29.02■■■□□ 2.24
TMEM248-205ENST00000433271 NFIL3Q16649 462 aa29.02■■■□□ 2.24
TMEM248-205ENST00000433271 SRGAP1Q7Z6B7 1085 aa29.02■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms