RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 ALDH7A1P49419 539 aaKnown RBP15.96■□□□□ 0.15
SMARCE1-205ENST00000431889 CBX2Q14781 532 aaPredicted RBP15.96■□□□□ 0.15
SMARCE1-205ENST00000431889 ZNF280BQ86YH2 543 aa15.96■□□□□ 0.15
SMARCE1-205ENST00000431889 VPS52Q8N1B4 723 aa15.96■□□□□ 0.15
SMARCE1-205ENST00000431889 PRPF31Q8WWY3 499 aaKnown RBP15.96■□□□□ 0.15
SMARCE1-205ENST00000431889 SUSD6Q92537 303 aa15.96■□□□□ 0.15
SMARCE1-205ENST00000431889 PHOX2BQ99453 314 aa15.96■□□□□ 0.15
SMARCE1-205ENST00000431889 SMOC2Q9H3U7 446 aa15.96■□□□□ 0.15
SMARCE1-205ENST00000431889 IFT122Q9HBG6 1241 aa15.96■□□□□ 0.15
SMARCE1-205ENST00000431889 KCNMB3Q9NPA1 279 aa15.96■□□□□ 0.15
SMARCE1-205ENST00000431889 DACT1Q9NYF0 836 aa15.96■□□□□ 0.15
SMARCE1-205ENST00000431889 ORC3Q9UBD5 711 aaPredicted RBP15.96■□□□□ 0.15
SMARCE1-205ENST00000431889 LZTS1Q9Y250 596 aa15.96■□□□□ 0.15
SMARCE1-205ENST00000431889 HCFC2Q9Y5Z7 792 aa15.96■□□□□ 0.15
SMARCE1-205ENST00000431889 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.96■□□□□ 0.14
SMARCE1-205ENST00000431889 EOMESO95936 686 aa15.96■□□□□ 0.14
SMARCE1-205ENST00000431889 POLGP54098 1239 aaPredicted RBP15.96■□□□□ 0.14
SMARCE1-205ENST00000431889 ZXDAP98168 799 aa15.96■□□□□ 0.14
SMARCE1-205ENST00000431889 RNASELQ05823 741 aaKnown RBP15.96■□□□□ 0.14
SMARCE1-205ENST00000431889 PPP2R5CQ13362 524 aa15.96■□□□□ 0.14
SMARCE1-205ENST00000431889 SMC1AQ14683 1233 aaKnown RBP15.96■□□□□ 0.14
SMARCE1-205ENST00000431889 MRPL43Q8N983 215 aaKnown RBP15.96■□□□□ 0.14
SMARCE1-205ENST00000431889 PBXIP1Q96AQ6 731 aa15.96■□□□□ 0.14
SMARCE1-205ENST00000431889 TMEM169Q96HH4 297 aa15.96■□□□□ 0.14
SMARCE1-205ENST00000431889 CDCA3Q99618 268 aaPredicted RBP15.96■□□□□ 0.14
SMARCE1-205ENST00000431889 LXNQ9BS40 222 aa15.96■□□□□ 0.14
SMARCE1-205ENST00000431889 TBC1D13Q9NVG8 400 aa15.96■□□□□ 0.14
SMARCE1-205ENST00000431889 COL4A3BPQ9Y5P4 624 aa15.96■□□□□ 0.14
SMARCE1-205ENST00000431889 JAK2O60674 1132 aa15.95■□□□□ 0.14
SMARCE1-205ENST00000431889 PFKFB2O60825 505 aa15.95■□□□□ 0.14
SMARCE1-205ENST00000431889 OFD1O75665 1012 aa15.95■□□□□ 0.14
SMARCE1-205ENST00000431889 POMCP01189 267 aa15.95■□□□□ 0.14
SMARCE1-205ENST00000431889 FDPSP14324 419 aaKnown RBP15.95■□□□□ 0.14
SMARCE1-205ENST00000431889 EPCAMP16422 314 aa15.95■□□□□ 0.14
SMARCE1-205ENST00000431889 PPM1AP35813 382 aa15.95■□□□□ 0.14
SMARCE1-205ENST00000431889 SLC11A1P49279 550 aa15.95■□□□□ 0.14
SMARCE1-205ENST00000431889 MAPK8IP2Q13387 824 aaPredicted RBP15.95■□□□□ 0.14
SMARCE1-205ENST00000431889 NOMO2Q5JPE7 1267 aa15.95■□□□□ 0.14
SMARCE1-205ENST00000431889 RARS2Q5T160 578 aaKnown RBP15.95■□□□□ 0.14
SMARCE1-205ENST00000431889 GALNT17Q6IS24 598 aa15.95■□□□□ 0.14
SMARCE1-205ENST00000431889 PDE12Q6L8Q7 609 aaKnown RBP15.95■□□□□ 0.14
SMARCE1-205ENST00000431889 MOXD1Q6UVY6 613 aa15.95■□□□□ 0.14
SMARCE1-205ENST00000431889 TRIM67Q6ZTA4 783 aa15.95■□□□□ 0.14
SMARCE1-205ENST00000431889 TPH2Q8IWU9 490 aa15.95■□□□□ 0.14
SMARCE1-205ENST00000431889 VN1R3Q9BXE9 311 aa15.95■□□□□ 0.14
SMARCE1-205ENST00000431889 POMKQ9H5K3 350 aa15.95■□□□□ 0.14
SMARCE1-205ENST00000431889 NGRNQ9NPE2 291 aaKnown RBP15.95■□□□□ 0.14
SMARCE1-205ENST00000431889 PCDHB2Q9Y5E7 798 aa15.95■□□□□ 0.14
SMARCE1-205ENST00000431889 CDKL5O76039 1030 aa15.94■□□□□ 0.14
SMARCE1-205ENST00000431889 DDHD2O94830 711 aa15.94■□□□□ 0.14
SMARCE1-205ENST00000431889 YWHABP31946 246 aaKnown RBP15.94■□□□□ 0.14
SMARCE1-205ENST00000431889 NHLH1Q02575 133 aa15.94■□□□□ 0.14
SMARCE1-205ENST00000431889 LAMTOR4Q0VGL1 99 aa15.94■□□□□ 0.14
SMARCE1-205ENST00000431889 ME3Q16798 604 aa15.94■□□□□ 0.14
SMARCE1-205ENST00000431889 XKR9Q5GH70 373 aa15.94■□□□□ 0.14
SMARCE1-205ENST00000431889 GLB1LQ6UWU2 654 aa15.94■□□□□ 0.14
SMARCE1-205ENST00000431889 AGMOQ6ZNB7 445 aa15.94■□□□□ 0.14
SMARCE1-205ENST00000431889 ZBTB33Q86T24 672 aa15.94■□□□□ 0.14
SMARCE1-205ENST00000431889 ZNF410Q86VK4 478 aa15.94■□□□□ 0.14
SMARCE1-205ENST00000431889 SLC7A3Q8WY07 619 aa15.94■□□□□ 0.14
SMARCE1-205ENST00000431889 CPB2Q96IY4 423 aa15.94■□□□□ 0.14
SMARCE1-205ENST00000431889 USP34Q70CQ2 3546 aa15.94■□□□□ 0.14
SMARCE1-205ENST00000431889 PDGFBP01127 241 aaPredicted RBP15.93■□□□□ 0.14
SMARCE1-205ENST00000431889 P4HBP07237 508 aaKnown RBP15.93■□□□□ 0.14
SMARCE1-205ENST00000431889 GALTP07902 379 aa15.93■□□□□ 0.14
SMARCE1-205ENST00000431889 ATP2B1P20020 1258 aa15.93■□□□□ 0.14
SMARCE1-205ENST00000431889 GUCY1B3Q02153 619 aa15.93■□□□□ 0.14
SMARCE1-205ENST00000431889 PPP4R3AQ6IN85 833 aa15.93■□□□□ 0.14
SMARCE1-205ENST00000431889 CDR2LQ86X02 465 aaPredicted RBP15.93■□□□□ 0.14
SMARCE1-205ENST00000431889 TMEM87AQ8NBN3 555 aa15.93■□□□□ 0.14
SMARCE1-205ENST00000431889 RNF149Q8NC42 400 aa15.93■□□□□ 0.14
SMARCE1-205ENST00000431889 FAM20AQ96MK3 541 aa15.93■□□□□ 0.14
SMARCE1-205ENST00000431889 APOL6Q9BWW8 343 aa15.93■□□□□ 0.14
SMARCE1-205ENST00000431889 CHST12Q9NRB3 414 aa15.93■□□□□ 0.14
SMARCE1-205ENST00000431889 AGPAT5Q9NUQ2 364 aa15.93■□□□□ 0.14
SMARCE1-205ENST00000431889 HES2Q9Y543 173 aa15.93■□□□□ 0.14
SMARCE1-205ENST00000431889 ZNF318Q5VUA4 2279 aa15.93■□□□□ 0.14
SMARCE1-205ENST00000431889 MYO10Q9HD67 2058 aa15.93■□□□□ 0.14
SMARCE1-205ENST00000431889 F8W810 466 aa15.92■□□□□ 0.14
SMARCE1-205ENST00000431889 C2CD2LO14523 706 aa15.92■□□□□ 0.14
SMARCE1-205ENST00000431889 SRGAP2BP0DMP2 458 aa15.92■□□□□ 0.14
SMARCE1-205ENST00000431889 KRT2P35908 639 aa15.92■□□□□ 0.14
SMARCE1-205ENST00000431889 SPIRE1Q08AE8 756 aa15.92■□□□□ 0.14
SMARCE1-205ENST00000431889 EMC2Q15006 297 aa15.92■□□□□ 0.14
SMARCE1-205ENST00000431889 UBXN11Q5T124 520 aa15.92■□□□□ 0.14
SMARCE1-205ENST00000431889 TMEM184AQ6ZMB5 413 aa15.92■□□□□ 0.14
SMARCE1-205ENST00000431889 MAEAQ7L5Y9 396 aa15.92■□□□□ 0.14
SMARCE1-205ENST00000431889 PRSS33Q8NF86 280 aa15.92■□□□□ 0.14
SMARCE1-205ENST00000431889 PSPC1Q8WXF1 523 aaKnown RBP15.92■□□□□ 0.14
SMARCE1-205ENST00000431889 IGSF21Q96ID5 467 aa15.92■□□□□ 0.14
SMARCE1-205ENST00000431889 MFSD14AQ96MC6 490 aa15.92■□□□□ 0.14
SMARCE1-205ENST00000431889 EIF2AQ9BY44 585 aaKnown RBP15.92■□□□□ 0.14
SMARCE1-205ENST00000431889 MRPL9Q9BYD2 267 aaKnown RBP15.92■□□□□ 0.14
SMARCE1-205ENST00000431889 ZBP1Q9H171 429 aa15.92■□□□□ 0.14
SMARCE1-205ENST00000431889 RNF39Q9H2S5 420 aa15.92■□□□□ 0.14
SMARCE1-205ENST00000431889 ARIH1Q9Y4X5 557 aaPredicted RBP15.92■□□□□ 0.14
SMARCE1-205ENST00000431889 STK36Q9NRP7 1315 aa15.92■□□□□ 0.14
SMARCE1-205ENST00000431889 BTBD18B2RXH4 712 aa15.92■□□□□ 0.14
SMARCE1-205ENST00000431889 C2CD4DB7Z1M9 353 aa15.92■□□□□ 0.14
SMARCE1-205ENST00000431889 ASGR2P07307 311 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms