RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 CHAC2Q8WUX2 184 aa3.02□□□□□ -1.93
CDC40-204ENST00000431461 GFM2Q969S9 779 aaKnown RBP3.02□□□□□ -1.93
CDC40-204ENST00000431461 SLC7A6OSQ96CW6 309 aaPredicted RBP3.02□□□□□ -1.93
CDC40-204ENST00000431461 GBP4Q96PP9 640 aa3.02□□□□□ -1.93
CDC40-204ENST00000431461 GPHA2Q96T91 129 aa3.02□□□□□ -1.93
CDC40-204ENST00000431461 GPR87Q9BY21 358 aa3.02□□□□□ -1.93
CDC40-204ENST00000431461 CAAP1Q9H8G2 361 aa3.02□□□□□ -1.93
CDC40-204ENST00000431461 SLC52A2Q9HAB3 445 aa3.02□□□□□ -1.93
CDC40-204ENST00000431461 SPATA31A6Q5VVP1 1343 aa3.01□□□□□ -1.93
CDC40-204ENST00000431461 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.01□□□□□ -1.93
CDC40-204ENST00000431461 TCRBV16S1A1N1A0A5B0 115 aa3.01□□□□□ -1.93
CDC40-204ENST00000431461 CCDC66A2RUB6 948 aa3.01□□□□□ -1.93
CDC40-204ENST00000431461 PRAMEF22A3QJZ6 481 aa3.01□□□□□ -1.93
CDC40-204ENST00000431461 KLRG2A4D1S0 409 aaPredicted RBP3.01□□□□□ -1.93
CDC40-204ENST00000431461 C2orf78A6NCI8 922 aa3.01□□□□□ -1.93
CDC40-204ENST00000431461 GOLGA6L6A8MZA4 724 aa3.01□□□□□ -1.93
CDC40-204ENST00000431461 FOXP2O15409 715 aa3.01□□□□□ -1.93
CDC40-204ENST00000431461 MAFGO15525 162 aa3.01□□□□□ -1.93
CDC40-204ENST00000431461 BRINP1O60477 761 aa3.01□□□□□ -1.93
CDC40-204ENST00000431461 HIP1RO75146 1068 aa3.01□□□□□ -1.93
CDC40-204ENST00000431461 CRTAMO95727 393 aa3.01□□□□□ -1.93
CDC40-204ENST00000431461 ITGB1P05556 798 aa3.01□□□□□ -1.93
CDC40-204ENST00000431461 VIL1P09327 827 aaKnown RBP3.01□□□□□ -1.93
CDC40-204ENST00000431461 SRGAP2CP0DJJ0 459 aa3.01□□□□□ -1.93
CDC40-204ENST00000431461 GYS2P54840 703 aa3.01□□□□□ -1.93
CDC40-204ENST00000431461 TAP1Q03518 808 aa3.01□□□□□ -1.93
CDC40-204ENST00000431461 ELAVL1Q15717 326 aaKnown RBP3.01□□□□□ -1.93
CDC40-204ENST00000431461 GAGE13Q4V321 117 aa3.01□□□□□ -1.93
CDC40-204ENST00000431461 DALRD3Q5D0E6 543 aaKnown RBP3.01□□□□□ -1.93
CDC40-204ENST00000431461 LY6G5CQ5SRR4 150 aa3.01□□□□□ -1.93
CDC40-204ENST00000431461 FOXB2Q5VYV0 432 aa3.01□□□□□ -1.93
CDC40-204ENST00000431461 ZCCHC8Q6NZY4 707 aaKnown RBP3.01□□□□□ -1.93
CDC40-204ENST00000431461 KCNV1Q6PIU1 500 aa3.01□□□□□ -1.93
CDC40-204ENST00000431461 RD3Q7Z3Z2 195 aa3.01□□□□□ -1.93
CDC40-204ENST00000431461 BRAPQ7Z569 592 aa3.01□□□□□ -1.93
CDC40-204ENST00000431461 LRRTM3Q86VH5 581 aa3.01□□□□□ -1.93
CDC40-204ENST00000431461 NME9Q86XW9 330 aa3.01□□□□□ -1.93
CDC40-204ENST00000431461 NOSTRINQ8IVI9 506 aa3.01□□□□□ -1.93
CDC40-204ENST00000431461 ZNF276Q8N554 614 aa3.01□□□□□ -1.93
CDC40-204ENST00000431461 MB21D1Q8N884 522 aa3.01□□□□□ -1.93
CDC40-204ENST00000431461 HIPK4Q8NE63 616 aa3.01□□□□□ -1.93
CDC40-204ENST00000431461 OR2W6PQ8NHA6 318 aa3.01□□□□□ -1.93
CDC40-204ENST00000431461 DLG3Q92796 817 aa3.01□□□□□ -1.93
CDC40-204ENST00000431461 E2F7Q96AV8 911 aa3.01□□□□□ -1.93
CDC40-204ENST00000431461 MNTQ99583 582 aa3.01□□□□□ -1.93
CDC40-204ENST00000431461 TOR3AQ9H497 397 aa3.01□□□□□ -1.93
CDC40-204ENST00000431461 TRIM39Q9HCM9 518 aa3.01□□□□□ -1.93
CDC40-204ENST00000431461 KCNH7Q9NS40 1196 aa3.01□□□□□ -1.93
CDC40-204ENST00000431461 SAE1Q9UBE0 346 aaPredicted RBP3.01□□□□□ -1.93
CDC40-204ENST00000431461 MCM8Q9UJA3 840 aa3.01□□□□□ -1.93
CDC40-204ENST00000431461 ZKSCAN5Q9Y2L8 839 aa3.01□□□□□ -1.93
CDC40-204ENST00000431461 CD2APQ9Y5K6 639 aa3.01□□□□□ -1.93
CDC40-204ENST00000431461 UBE2QL1A1L167 161 aa3□□□□□ -1.93
CDC40-204ENST00000431461 ANKRD62A6NC57 917 aa3□□□□□ -1.93
CDC40-204ENST00000431461 RASSF10A6NK89 507 aa3□□□□□ -1.93
CDC40-204ENST00000431461 SCDO00767 359 aa3□□□□□ -1.93
CDC40-204ENST00000431461 KCNK3O14649 394 aa3□□□□□ -1.93
CDC40-204ENST00000431461 ZEB2O60315 1214 aa3□□□□□ -1.93
CDC40-204ENST00000431461 GAS7O60861 476 aa3□□□□□ -1.93
CDC40-204ENST00000431461 MFAP3LO75121 409 aa3□□□□□ -1.93
CDC40-204ENST00000431461 RAPGEF3O95398 923 aa3□□□□□ -1.93
CDC40-204ENST00000431461 DNM2P50570 870 aa3□□□□□ -1.93
CDC40-204ENST00000431461 SCNN1BP51168 640 aa3□□□□□ -1.93
CDC40-204ENST00000431461 ALDH6A1Q02252 535 aaKnown RBP3□□□□□ -1.93
CDC40-204ENST00000431461 PTPAQ15257 358 aa3□□□□□ -1.93
CDC40-204ENST00000431461 DHCR24Q15392 516 aa3□□□□□ -1.93
CDC40-204ENST00000431461 CFAP100Q494V2 611 aa3□□□□□ -1.93
CDC40-204ENST00000431461 HECTD2Q5U5R9 776 aa3□□□□□ -1.93
CDC40-204ENST00000431461 NAIF1Q69YI7 327 aaPredicted RBP3□□□□□ -1.93
CDC40-204ENST00000431461 MFSD5Q6N075 450 aa3□□□□□ -1.93
CDC40-204ENST00000431461 OLFML1Q6UWY5 402 aa3□□□□□ -1.93
CDC40-204ENST00000431461 C11orf74Q86VG3 221 aa3□□□□□ -1.93
CDC40-204ENST00000431461 ZZZ3Q8IYH5 903 aa3□□□□□ -1.93
CDC40-204ENST00000431461 FAM177A1Q8N128 213 aaPredicted RBP3□□□□□ -1.93
CDC40-204ENST00000431461 SYNE4Q8N205 404 aa3□□□□□ -1.93
CDC40-204ENST00000431461 ANKRD53Q8N9V6 530 aa3□□□□□ -1.93
CDC40-204ENST00000431461 BEND2Q8NDZ0 799 aa3□□□□□ -1.93
CDC40-204ENST00000431461 NELL1Q92832 810 aa3□□□□□ -1.93
CDC40-204ENST00000431461 RPL10LQ96L21 214 aaKnown RBP3□□□□□ -1.93
CDC40-204ENST00000431461 TCF25Q9BQ70 676 aa3□□□□□ -1.93
CDC40-204ENST00000431461 DENND2AQ9ULE3 1009 aa3□□□□□ -1.93
CDC40-204ENST00000431461 PCDHA9Q9Y5H5 950 aa3□□□□□ -1.93
CDC40-204ENST00000431461 HS3ST4Q9Y661 456 aa3□□□□□ -1.93
CDC40-204ENST00000431461 GRXCR1A8MXD5 290 aa2.99□□□□□ -1.93
CDC40-204ENST00000431461 PDE8AO60658 829 aa2.99□□□□□ -1.93
CDC40-204ENST00000431461 ULK1O75385 1050 aa2.99□□□□□ -1.93
CDC40-204ENST00000431461 ABHD16AO95870 558 aa2.99□□□□□ -1.93
CDC40-204ENST00000431461 CYP17A1P05093 508 aa2.99□□□□□ -1.93
CDC40-204ENST00000431461 MYCLP1P12525 358 aaPredicted RBP2.99□□□□□ -1.93
CDC40-204ENST00000431461 NR4A1P22736 598 aa2.99□□□□□ -1.93
CDC40-204ENST00000431461 PTH2RP49190 550 aa2.99□□□□□ -1.93
CDC40-204ENST00000431461 NEK4P51957 841 aa2.99□□□□□ -1.93
CDC40-204ENST00000431461 BPIFB4P59827 614 aa2.99□□□□□ -1.93
CDC40-204ENST00000431461 ZNF174Q15697 407 aa2.99□□□□□ -1.93
CDC40-204ENST00000431461 FKBP15Q5T1M5 1219 aa2.99□□□□□ -1.93
CDC40-204ENST00000431461 C1QL3Q5VWW1 255 aa2.99□□□□□ -1.93
CDC40-204ENST00000431461 DDX46Q7L014 1031 aaKnown RBP2.99□□□□□ -1.93
CDC40-204ENST00000431461 HDGFL2Q7Z4V5 671 aaPredicted RBP2.99□□□□□ -1.93
CDC40-204ENST00000431461 C2orf69Q8N8R5 385 aa2.99□□□□□ -1.93
CDC40-204ENST00000431461 CHST14Q8NCH0 376 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms