RNA–Protein interactions for RNA: ENST00000430454.5

HDAC9-211, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-211ENST00000430454 MCM2P49736 904 aa10.16□□□□□ -0.78
HDAC9-211ENST00000430454 FOSBP53539 338 aa10.16□□□□□ -0.78
HDAC9-211ENST00000430454 NPEPPSP55786 919 aa10.16□□□□□ -0.78
HDAC9-211ENST00000430454 POU5F1BQ06416 359 aa10.16□□□□□ -0.78
HDAC9-211ENST00000430454 ADAM15Q13444 863 aa10.16□□□□□ -0.78
HDAC9-211ENST00000430454 DRP2Q13474 957 aa10.16□□□□□ -0.78
HDAC9-211ENST00000430454 SMAD4Q13485 552 aaKnown RBP10.16□□□□□ -0.78
HDAC9-211ENST00000430454 HAUS3Q68CZ6 603 aa10.16□□□□□ -0.78
HDAC9-211ENST00000430454 FERMT3Q86UX7 667 aa10.16□□□□□ -0.78
HDAC9-211ENST00000430454 FAM178BQ8IXR5 827 aa10.16□□□□□ -0.78
HDAC9-211ENST00000430454 MCPH1Q8NEM0 835 aa10.16□□□□□ -0.78
HDAC9-211ENST00000430454 FBXO18Q8NFZ0 1043 aa10.16□□□□□ -0.78
HDAC9-211ENST00000430454 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.16□□□□□ -0.78
HDAC9-211ENST00000430454 HELQQ8TDG4 1101 aa10.16□□□□□ -0.78
HDAC9-211ENST00000430454 TMEM143Q96AN5 459 aa10.16□□□□□ -0.78
HDAC9-211ENST00000430454 TMEM169Q96HH4 297 aa10.16□□□□□ -0.78
HDAC9-211ENST00000430454 ZNF668Q96K58 619 aaPredicted RBP10.16□□□□□ -0.78
HDAC9-211ENST00000430454 NECAB3Q96P71 396 aaPredicted RBP10.16□□□□□ -0.78
HDAC9-211ENST00000430454 CASD1Q96PB1 797 aa10.16□□□□□ -0.78
HDAC9-211ENST00000430454 FAM193BQ96PV7 902 aaPredicted RBP10.16□□□□□ -0.78
HDAC9-211ENST00000430454 CEP89Q96ST8 783 aa10.16□□□□□ -0.78
HDAC9-211ENST00000430454 HSD17B14Q9BPX1 270 aa10.16□□□□□ -0.78
HDAC9-211ENST00000430454 SH2D3AQ9BRG2 576 aa10.16□□□□□ -0.78
HDAC9-211ENST00000430454 AGPAT5Q9NUQ2 364 aa10.16□□□□□ -0.78
HDAC9-211ENST00000430454 FAM105AQ9NUU6 356 aa10.16□□□□□ -0.78
HDAC9-211ENST00000430454 RGL1Q9NZL6 768 aa10.16□□□□□ -0.78
HDAC9-211ENST00000430454 NCOR1O75376 2440 aa10.15□□□□□ -0.78
HDAC9-211ENST00000430454 CSPG5O95196 566 aa10.15□□□□□ -0.78
HDAC9-211ENST00000430454 SEC24BO95487 1268 aa10.15□□□□□ -0.78
HDAC9-211ENST00000430454 OR52Z1P0C646 297 aa10.15□□□□□ -0.78
HDAC9-211ENST00000430454 MUTP22033 750 aa10.15□□□□□ -0.78
HDAC9-211ENST00000430454 FGFR4P22455 802 aa10.15□□□□□ -0.78
HDAC9-211ENST00000430454 SPIRE1Q08AE8 756 aa10.15□□□□□ -0.78
HDAC9-211ENST00000430454 SMC1AQ14683 1233 aaKnown RBP10.15□□□□□ -0.78
HDAC9-211ENST00000430454 NOMO2Q5JPE7 1267 aa10.15□□□□□ -0.78
HDAC9-211ENST00000430454 EARS2Q5JPH6 523 aaKnown RBP10.15□□□□□ -0.78
HDAC9-211ENST00000430454 NOTUMQ6P988 496 aa10.15□□□□□ -0.78
HDAC9-211ENST00000430454 TMC7Q7Z402 723 aa10.15□□□□□ -0.78
HDAC9-211ENST00000430454 ZNF598Q86UK7 904 aaKnown RBP10.15□□□□□ -0.78
HDAC9-211ENST00000430454 NOSTRINQ8IVI9 506 aa10.15□□□□□ -0.78
HDAC9-211ENST00000430454 ZBTB8OSQ8IWT0 167 aa10.15□□□□□ -0.78
HDAC9-211ENST00000430454 ADHFE1Q8IWW8 467 aa10.15□□□□□ -0.78
HDAC9-211ENST00000430454 RNF149Q8NC42 400 aa10.15□□□□□ -0.78
HDAC9-211ENST00000430454 MTMR9Q96QG7 549 aa10.15□□□□□ -0.78
HDAC9-211ENST00000430454 TCF25Q9BQ70 676 aa10.15□□□□□ -0.78
HDAC9-211ENST00000430454 POLR3CQ9BUI4 534 aaPredicted RBP10.15□□□□□ -0.78
HDAC9-211ENST00000430454 TRIM6Q9C030 488 aaPredicted RBP10.15□□□□□ -0.78
HDAC9-211ENST00000430454 CWH43Q9H720 699 aa10.15□□□□□ -0.78
HDAC9-211ENST00000430454 PCDHB2Q9Y5E7 798 aa10.15□□□□□ -0.78
HDAC9-211ENST00000430454 LOXHD1Q8IVV2 1947 aa10.15□□□□□ -0.79
HDAC9-211ENST00000430454 FAM205CA6NFA0 338 aa10.14□□□□□ -0.79
HDAC9-211ENST00000430454 INO80B-WBP1J3KQ70 363 aa10.14□□□□□ -0.79
HDAC9-211ENST00000430454 LAD1O00515 517 aa10.14□□□□□ -0.79
HDAC9-211ENST00000430454 CSDE1O75534 798 aaKnown RBP10.14□□□□□ -0.79
HDAC9-211ENST00000430454 IL9P15248 144 aa10.14□□□□□ -0.79
HDAC9-211ENST00000430454 HOXB8P17481 243 aaPredicted RBP10.14□□□□□ -0.79
HDAC9-211ENST00000430454 DNAJB1P25685 340 aa10.14□□□□□ -0.79
HDAC9-211ENST00000430454 GUCY1B3Q02153 619 aa10.14□□□□□ -0.79
HDAC9-211ENST00000430454 COASYQ13057 564 aa10.14□□□□□ -0.79
HDAC9-211ENST00000430454 CAMK1Q14012 370 aa10.14□□□□□ -0.79
HDAC9-211ENST00000430454 SMAD2Q15796 467 aaKnown RBP10.14□□□□□ -0.79
HDAC9-211ENST00000430454 DUSP6Q16828 381 aa10.14□□□□□ -0.79
HDAC9-211ENST00000430454 TMEM31Q5JXX7 168 aa10.14□□□□□ -0.79
HDAC9-211ENST00000430454 CLLU1OSQ5K130 101 aa10.14□□□□□ -0.79
HDAC9-211ENST00000430454 TTC38Q5R3I4 469 aa10.14□□□□□ -0.79
HDAC9-211ENST00000430454 ELMSAN1Q6PJG2 1045 aa10.14□□□□□ -0.79
HDAC9-211ENST00000430454 APBB1IPQ7Z5R6 666 aaPredicted RBP10.14□□□□□ -0.79
HDAC9-211ENST00000430454 RBM23Q86U06 439 aaKnown RBP10.14□□□□□ -0.79
HDAC9-211ENST00000430454 KSR1Q8IVT5 923 aa10.14□□□□□ -0.79
HDAC9-211ENST00000430454 CASP10Q92851 521 aa10.14□□□□□ -0.79
HDAC9-211ENST00000430454 NFKBIZQ9BYH8 718 aa10.14□□□□□ -0.79
HDAC9-211ENST00000430454 C2orf40Q9H1Z8 148 aa10.14□□□□□ -0.79
HDAC9-211ENST00000430454 IFT122Q9HBG6 1241 aa10.14□□□□□ -0.79
HDAC9-211ENST00000430454 DBR1Q9UK59 544 aaKnown RBP10.14□□□□□ -0.79
HDAC9-211ENST00000430454 SSX2IPQ9Y2D8 614 aa10.14□□□□□ -0.79
HDAC9-211ENST00000430454 ARHGEF35A5YM69 484 aa10.13□□□□□ -0.79
HDAC9-211ENST00000430454 PI4K2BG5E9Z4 385 aa10.13□□□□□ -0.79
HDAC9-211ENST00000430454 FSCN2O14926 492 aa10.13□□□□□ -0.79
HDAC9-211ENST00000430454 MBTPS2O43462 519 aa10.13□□□□□ -0.79
HDAC9-211ENST00000430454 ZC3H11AO75152 810 aaKnown RBP eCLIP10.13□□□□□ -0.79
HDAC9-211ENST00000430454 EYA4O95677 639 aa10.13□□□□□ -0.79
HDAC9-211ENST00000430454 ALDH2P05091 517 aa10.13□□□□□ -0.79
HDAC9-211ENST00000430454 ITGA4P13612 1032 aa10.13□□□□□ -0.79
HDAC9-211ENST00000430454 RPA1P27694 616 aa10.13□□□□□ -0.79
HDAC9-211ENST00000430454 CA8P35219 290 aa10.13□□□□□ -0.79
HDAC9-211ENST00000430454 IRS1P35568 1242 aa10.13□□□□□ -0.79
HDAC9-211ENST00000430454 LTBRP36941 435 aa10.13□□□□□ -0.79
HDAC9-211ENST00000430454 TECP42680 631 aa10.13□□□□□ -0.79
HDAC9-211ENST00000430454 RARRES1P49788 294 aa10.13□□□□□ -0.79
HDAC9-211ENST00000430454 BCAR1P56945 870 aa10.13□□□□□ -0.79
HDAC9-211ENST00000430454 PTENP60484 403 aa10.13□□□□□ -0.79
HDAC9-211ENST00000430454 PDIA5Q14554 519 aa10.13□□□□□ -0.79
HDAC9-211ENST00000430454 PPP2R5AQ15172 486 aa10.13□□□□□ -0.79
HDAC9-211ENST00000430454 ZNF174Q15697 407 aa10.13□□□□□ -0.79
HDAC9-211ENST00000430454 CLUL1Q15846 466 aa10.13□□□□□ -0.79
HDAC9-211ENST00000430454 PLPP4Q5VZY2 271 aa10.13□□□□□ -0.79
HDAC9-211ENST00000430454 CES5AQ6NT32 575 aa10.13□□□□□ -0.79
HDAC9-211ENST00000430454 LRRC55Q6ZSA7 311 aa10.13□□□□□ -0.79
HDAC9-211ENST00000430454 MRPL10Q7Z7H8 261 aaKnown RBP10.13□□□□□ -0.79
HDAC9-211ENST00000430454 PPFIBP1Q86W92 1011 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms