RNA–Protein interactions for RNA: ENST00000429836.5

SEMA4D-209, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-209ENST00000429836 SPOCK2Q92563 424 aa11.93□□□□□ -0.5
SEMA4D-209ENST00000429836 KRT35Q92764 455 aa11.93□□□□□ -0.5
SEMA4D-209ENST00000429836 LRMDAQ9H2I8 198 aa11.93□□□□□ -0.5
SEMA4D-209ENST00000429836 KCTD10Q9H3F6 313 aa11.93□□□□□ -0.5
SEMA4D-209ENST00000429836 DENND2DQ9H6A0 471 aaPredicted RBP11.93□□□□□ -0.5
SEMA4D-209ENST00000429836 SEPT11Q9NVA2 429 aaKnown RBP11.93□□□□□ -0.5
SEMA4D-209ENST00000429836 NMRK1Q9NWW6 199 aa11.93□□□□□ -0.5
SEMA4D-209ENST00000429836 CHORDC1Q9UHD1 332 aaPredicted RBP11.93□□□□□ -0.5
SEMA4D-209ENST00000429836 JAG2Q9Y219 1238 aa11.93□□□□□ -0.5
SEMA4D-209ENST00000429836 CACNA1SQ13698 1873 aa11.92□□□□□ -0.5
SEMA4D-209ENST00000429836 A0A0A6YYK5 440 aaPredicted RBP11.92□□□□□ -0.5
SEMA4D-209ENST00000429836 KLRF2D3W0D1 207 aa11.92□□□□□ -0.5
SEMA4D-209ENST00000429836 PHF2O75151 1096 aa11.92□□□□□ -0.5
SEMA4D-209ENST00000429836 CBX6O95503 412 aa11.92□□□□□ -0.5
SEMA4D-209ENST00000429836 GNA14O95837 355 aa11.92□□□□□ -0.5
SEMA4D-209ENST00000429836 PYGBP11216 843 aa11.92□□□□□ -0.5
SEMA4D-209ENST00000429836 RARGP13631 454 aa11.92□□□□□ -0.5
SEMA4D-209ENST00000429836 ACADSP16219 412 aa11.92□□□□□ -0.5
SEMA4D-209ENST00000429836 VCAM1P19320 739 aa11.92□□□□□ -0.5
SEMA4D-209ENST00000429836 PRKCIP41743 596 aa11.92□□□□□ -0.5
SEMA4D-209ENST00000429836 CASP5P51878 434 aa11.92□□□□□ -0.5
SEMA4D-209ENST00000429836 CUL3Q13618 768 aa11.92□□□□□ -0.5
SEMA4D-209ENST00000429836 SPTY2D1Q68D10 685 aaPredicted RBP11.92□□□□□ -0.5
SEMA4D-209ENST00000429836 RNF43Q68DV7 783 aa11.92□□□□□ -0.5
SEMA4D-209ENST00000429836 BRINP3Q76B58 766 aa11.92□□□□□ -0.5
SEMA4D-209ENST00000429836 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.92□□□□□ -0.5
SEMA4D-209ENST00000429836 MCM9Q9NXL9 1143 aa11.92□□□□□ -0.5
SEMA4D-209ENST00000429836 TAS2R14Q9NYV8 317 aa11.92□□□□□ -0.5
SEMA4D-209ENST00000429836 CHKBQ9Y259 395 aa11.92□□□□□ -0.5
SEMA4D-209ENST00000429836 PCDHA3Q9Y5H8 950 aa11.92□□□□□ -0.5
SEMA4D-209ENST00000429836 DCCP43146 1447 aa11.92□□□□□ -0.5
SEMA4D-209ENST00000429836 A0A1B0GUL6 1792 aa11.92□□□□□ -0.5
SEMA4D-209ENST00000429836 CETN3O15182 167 aa11.92□□□□□ -0.5
SEMA4D-209ENST00000429836 RASA1P20936 1047 aa11.92□□□□□ -0.5
SEMA4D-209ENST00000429836 SKIV2L2P42285 1042 aaKnown RBP11.92□□□□□ -0.5
SEMA4D-209ENST00000429836 MARSP56192 900 aaKnown RBP11.92□□□□□ -0.5
SEMA4D-209ENST00000429836 PPATQ06203 517 aa11.92□□□□□ -0.5
SEMA4D-209ENST00000429836 RCN2Q14257 317 aa11.92□□□□□ -0.5
SEMA4D-209ENST00000429836 TMEM266Q2M3C6 531 aa11.92□□□□□ -0.5
SEMA4D-209ENST00000429836 PARP6Q2NL67 630 aa11.92□□□□□ -0.5
SEMA4D-209ENST00000429836 CCDC137Q6PK04 289 aaKnown RBP11.92□□□□□ -0.5
SEMA4D-209ENST00000429836 SLC44A5Q8NCS7 719 aa11.92□□□□□ -0.5
SEMA4D-209ENST00000429836 FGD4Q96M96 766 aa11.92□□□□□ -0.5
SEMA4D-209ENST00000429836 PITPNM3Q9BZ71 974 aa11.92□□□□□ -0.5
SEMA4D-209ENST00000429836 UBE2OQ9C0C9 1292 aaKnown RBP11.92□□□□□ -0.5
SEMA4D-209ENST00000429836 CARD9Q9H257 536 aa11.92□□□□□ -0.5
SEMA4D-209ENST00000429836 C6orf50Q9HD87 102 aa11.92□□□□□ -0.5
SEMA4D-209ENST00000429836 PRDM11Q9NQV5 511 aa11.92□□□□□ -0.5
SEMA4D-209ENST00000429836 METTL5Q9NRN9 209 aaKnown RBP11.92□□□□□ -0.5
SEMA4D-209ENST00000429836 EMILIN3Q9NT22 766 aa11.92□□□□□ -0.5
SEMA4D-209ENST00000429836 COG5Q9UP83 839 aa11.92□□□□□ -0.5
SEMA4D-209ENST00000429836 ZBTB1Q9Y2K1 713 aa11.92□□□□□ -0.5
SEMA4D-209ENST00000429836 TAC1P20366 129 aa11.91□□□□□ -0.5
SEMA4D-209ENST00000429836 DRG2P55039 364 aaKnown RBP11.91□□□□□ -0.5
SEMA4D-209ENST00000429836 CTTNQ14247 550 aaKnown RBP11.91□□□□□ -0.5
SEMA4D-209ENST00000429836 RRP1BQ14684 758 aaKnown RBP11.91□□□□□ -0.5
SEMA4D-209ENST00000429836 MTFR1Q15390 333 aa11.91□□□□□ -0.5
SEMA4D-209ENST00000429836 ZC2HC1CQ53FD0 456 aaPredicted RBP11.91□□□□□ -0.5
SEMA4D-209ENST00000429836 RFWD3Q6PCD5 774 aa11.91□□□□□ -0.5
SEMA4D-209ENST00000429836 NBPF5PQ86XG9 351 aaPredicted RBP11.91□□□□□ -0.5
SEMA4D-209ENST00000429836 SRRM1Q8IYB3 904 aaKnown RBP11.91□□□□□ -0.5
SEMA4D-209ENST00000429836 AGGF1Q8N302 714 aaeCLIP11.91□□□□□ -0.5
SEMA4D-209ENST00000429836 FAM136AQ96C01 138 aa11.91□□□□□ -0.5
SEMA4D-209ENST00000429836 SLC7A6OSQ96CW6 309 aaPredicted RBP11.91□□□□□ -0.5
SEMA4D-209ENST00000429836 RBM41Q96IZ5 413 aaKnown RBP11.91□□□□□ -0.5
SEMA4D-209ENST00000429836 NAP1L3Q99457 506 aaPredicted RBP11.91□□□□□ -0.5
SEMA4D-209ENST00000429836 THAP2Q9H0W7 228 aa11.91□□□□□ -0.5
SEMA4D-209ENST00000429836 OCEL1Q9H607 264 aa11.91□□□□□ -0.5
SEMA4D-209ENST00000429836 SIX2Q9NPC8 291 aa11.91□□□□□ -0.5
SEMA4D-209ENST00000429836 USP40Q9NVE5 1235 aa11.91□□□□□ -0.5
SEMA4D-209ENST00000429836 TMOD3Q9NYL9 352 aa11.91□□□□□ -0.5
SEMA4D-209ENST00000429836 PCDHA2Q9Y5H9 948 aa11.91□□□□□ -0.5
SEMA4D-209ENST00000429836 ABLIM1O14639 778 aa11.91□□□□□ -0.5
SEMA4D-209ENST00000429836 NVLO15381 856 aaKnown RBP11.91□□□□□ -0.5
SEMA4D-209ENST00000429836 EDIL3O43854 480 aa11.91□□□□□ -0.5
SEMA4D-209ENST00000429836 STARD3NLO95772 234 aa11.91□□□□□ -0.5
SEMA4D-209ENST00000429836 T-ENOLP0DO92 83 aa11.91□□□□□ -0.5
SEMA4D-209ENST00000429836 CHKAP35790 457 aa11.91□□□□□ -0.5
SEMA4D-209ENST00000429836 GNAQP50148 359 aa11.91□□□□□ -0.5
SEMA4D-209ENST00000429836 NPEPPSP55786 919 aa11.91□□□□□ -0.5
SEMA4D-209ENST00000429836 TMEM119Q4V9L6 283 aa11.91□□□□□ -0.5
SEMA4D-209ENST00000429836 SUSD4Q5VX71 490 aa11.91□□□□□ -0.5
SEMA4D-209ENST00000429836 CROCCP2Q86T23 111 aa11.91□□□□□ -0.5
SEMA4D-209ENST00000429836 PALB2Q86YC2 1186 aa11.91□□□□□ -0.5
SEMA4D-209ENST00000429836 CCNJLQ8IV13 435 aa11.91□□□□□ -0.5
SEMA4D-209ENST00000429836 CCDC105Q8IYK2 499 aa11.91□□□□□ -0.5
SEMA4D-209ENST00000429836 OLIG1Q8TAK6 271 aa11.91□□□□□ -0.5
SEMA4D-209ENST00000429836 CTNNBL1Q8WYA6 563 aaPredicted RBP11.91□□□□□ -0.5
SEMA4D-209ENST00000429836 RFFLQ8WZ73 363 aa11.91□□□□□ -0.5
SEMA4D-209ENST00000429836 FAM210AQ96ND0 272 aa11.91□□□□□ -0.5
SEMA4D-209ENST00000429836 GCNT4Q9P109 453 aa11.91□□□□□ -0.5
SEMA4D-209ENST00000429836 RREB1Q92766 1687 aa11.91□□□□□ -0.5
SEMA4D-209ENST00000429836 TNS2Q63HR2 1409 aa11.9□□□□□ -0.5
SEMA4D-209ENST00000429836 LRP5O75197 1615 aa11.9□□□□□ -0.5
SEMA4D-209ENST00000429836 E7ENQ6 273 aa11.9□□□□□ -0.5
SEMA4D-209ENST00000429836 CETPP11597 493 aa11.9□□□□□ -0.5
SEMA4D-209ENST00000429836 FXR2P51116 673 aaKnown RBP eCLIP11.9□□□□□ -0.5
SEMA4D-209ENST00000429836 MECOMQ03112 1051 aa11.9□□□□□ -0.5
SEMA4D-209ENST00000429836 DNAJC3Q13217 504 aa11.9□□□□□ -0.5
SEMA4D-209ENST00000429836 SETDB1Q15047 1291 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms