RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 KRT1P04264 644 aa13.55□□□□□ -0.24
CPNE4-201ENST00000429747 NPY5RQ15761 445 aa13.55□□□□□ -0.24
CPNE4-201ENST00000429747 TNS2Q63HR2 1409 aa13.55□□□□□ -0.24
CPNE4-201ENST00000429747 SLC30A10Q6XR72 485 aa13.55□□□□□ -0.24
CPNE4-201ENST00000429747 RNF25Q96BH1 459 aaPredicted RBP13.55□□□□□ -0.24
CPNE4-201ENST00000429747 RILPQ96NA2 401 aa13.55□□□□□ -0.24
CPNE4-201ENST00000429747 RUSC1Q9BVN2 902 aa13.55□□□□□ -0.24
CPNE4-201ENST00000429747 ADAM33Q9BZ11 813 aa13.55□□□□□ -0.24
CPNE4-201ENST00000429747 RIOX1Q9H6W3 641 aa13.55□□□□□ -0.24
CPNE4-201ENST00000429747 CCDC160A6NGH7 325 aa13.55□□□□□ -0.24
CPNE4-201ENST00000429747 H0Y3Z8 333 aa13.55□□□□□ -0.24
CPNE4-201ENST00000429747 CLDN3O15551 220 aa13.55□□□□□ -0.24
CPNE4-201ENST00000429747 PJA2O43164 708 aa13.55□□□□□ -0.24
CPNE4-201ENST00000429747 TMEM253P0C7T8 217 aa13.55□□□□□ -0.24
CPNE4-201ENST00000429747 PHBP35232 272 aa13.55□□□□□ -0.24
CPNE4-201ENST00000429747 DRP2Q13474 957 aa13.55□□□□□ -0.24
CPNE4-201ENST00000429747 MCF2L2Q86YR7 1114 aa13.55□□□□□ -0.24
CPNE4-201ENST00000429747 C11orf70Q9BRQ4 267 aa13.55□□□□□ -0.24
CPNE4-201ENST00000429747 NOP53Q9NZM5 478 aaKnown RBP13.55□□□□□ -0.24
CPNE4-201ENST00000429747 SEPT9Q9UHD8 586 aaPredicted RBP13.55□□□□□ -0.24
CPNE4-201ENST00000429747 LRRD1A4D1F6 860 aa13.54□□□□□ -0.24
CPNE4-201ENST00000429747 ZNF233A6NK53 670 aa13.54□□□□□ -0.24
CPNE4-201ENST00000429747 I3L4J1 428 aa13.54□□□□□ -0.24
CPNE4-201ENST00000429747 RPS6KA5O75582 802 aa13.54□□□□□ -0.24
CPNE4-201ENST00000429747 COMTP21964 271 aa13.54□□□□□ -0.24
CPNE4-201ENST00000429747 TAF11Q15544 211 aa13.54□□□□□ -0.24
CPNE4-201ENST00000429747 SCYL3Q8IZE3 742 aa13.54□□□□□ -0.24
CPNE4-201ENST00000429747 KCNV2Q8TDN2 545 aa13.54□□□□□ -0.24
CPNE4-201ENST00000429747 BAP1Q92560 729 aa13.54□□□□□ -0.24
CPNE4-201ENST00000429747 CAND2O75155 1236 aa13.54□□□□□ -0.24
CPNE4-201ENST00000429747 KRT17Q04695 432 aa13.54□□□□□ -0.24
CPNE4-201ENST00000429747 TRADDQ15628 312 aa13.54□□□□□ -0.24
CPNE4-201ENST00000429747 LRRC55Q6ZSA7 311 aa13.54□□□□□ -0.24
CPNE4-201ENST00000429747 GBP7Q8N8V2 638 aaPredicted RBP13.54□□□□□ -0.24
CPNE4-201ENST00000429747 SYT2Q8N9I0 419 aaPredicted RBP13.54□□□□□ -0.24
CPNE4-201ENST00000429747 FBXO25Q8TCJ0 367 aa13.54□□□□□ -0.24
CPNE4-201ENST00000429747 CFAP57Q96MR6 1250 aa13.54□□□□□ -0.24
CPNE4-201ENST00000429747 TGS1Q96RS0 853 aaKnown RBP13.54□□□□□ -0.24
CPNE4-201ENST00000429747 MMTAG2Q9BU76 263 aaKnown RBP13.54□□□□□ -0.24
CPNE4-201ENST00000429747 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.54□□□□□ -0.24
CPNE4-201ENST00000429747 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.54□□□□□ -0.24
CPNE4-201ENST00000429747 PHF2O75151 1096 aa13.54□□□□□ -0.24
CPNE4-201ENST00000429747 ANXA13P27216 316 aa13.54□□□□□ -0.24
CPNE4-201ENST00000429747 POLGP54098 1239 aaPredicted RBP13.54□□□□□ -0.24
CPNE4-201ENST00000429747 KCNMA1Q12791 1236 aa13.54□□□□□ -0.24
CPNE4-201ENST00000429747 GIT2Q14161 759 aa13.54□□□□□ -0.24
CPNE4-201ENST00000429747 SLC10A5Q5PT55 438 aa13.54□□□□□ -0.24
CPNE4-201ENST00000429747 CDC42EP5Q6NZY7 148 aa13.54□□□□□ -0.24
CPNE4-201ENST00000429747 ARHGAP27Q6ZUM4 889 aa13.54□□□□□ -0.24
CPNE4-201ENST00000429747 FERMT1Q9BQL6 677 aa13.54□□□□□ -0.24
CPNE4-201ENST00000429747 WNT8AQ9H1J5 351 aa13.54□□□□□ -0.24
CPNE4-201ENST00000429747 ECT2Q9H8V3 914 aa13.54□□□□□ -0.24
CPNE4-201ENST00000429747 LTN1O94822 1766 aa13.54□□□□□ -0.24
CPNE4-201ENST00000429747 SPATA31A1Q5TZJ5 1347 aa13.54□□□□□ -0.24
CPNE4-201ENST00000429747 SSTR3P32745 418 aaPredicted RBP13.53□□□□□ -0.24
CPNE4-201ENST00000429747 HSPA1LP34931 641 aa13.53□□□□□ -0.24
CPNE4-201ENST00000429747 HSPA9P38646 679 aaKnown RBP13.53□□□□□ -0.24
CPNE4-201ENST00000429747 YWHAGP61981 247 aaKnown RBP eCLIP13.53□□□□□ -0.24
CPNE4-201ENST00000429747 LMNB2Q03252 620 aa13.53□□□□□ -0.24
CPNE4-201ENST00000429747 CEP55Q53EZ4 464 aa13.53□□□□□ -0.24
CPNE4-201ENST00000429747 TRIM11Q96F44 468 aa13.53□□□□□ -0.24
CPNE4-201ENST00000429747 CXorf56Q9H5V9 222 aa13.53□□□□□ -0.24
CPNE4-201ENST00000429747 ETNK1Q9HBU6 452 aa13.53□□□□□ -0.24
CPNE4-201ENST00000429747 AIPL1Q9NZN9 384 aa13.53□□□□□ -0.24
CPNE4-201ENST00000429747 ADAM22Q9P0K1 906 aa13.53□□□□□ -0.24
CPNE4-201ENST00000429747 AGTP01019 485 aa13.53□□□□□ -0.24
CPNE4-201ENST00000429747 CD58P19256 250 aa13.53□□□□□ -0.24
CPNE4-201ENST00000429747 SLC20A2Q08357 652 aa13.53□□□□□ -0.24
CPNE4-201ENST00000429747 NLGN1Q8N2Q7 840 aa13.53□□□□□ -0.24
CPNE4-201ENST00000429747 ACTRT1Q8TDG2 376 aa13.53□□□□□ -0.24
CPNE4-201ENST00000429747 JDP2Q8WYK2 163 aa13.53□□□□□ -0.24
CPNE4-201ENST00000429747 CARD9Q9H257 536 aa13.53□□□□□ -0.24
CPNE4-201ENST00000429747 TXLNGQ9NUQ3 528 aa13.53□□□□□ -0.24
CPNE4-201ENST00000429747 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.53□□□□□ -0.24
CPNE4-201ENST00000429747 PFASO15067 1338 aa13.53□□□□□ -0.24
CPNE4-201ENST00000429747 FOXN3O00409 490 aaPredicted RBP13.53□□□□□ -0.24
CPNE4-201ENST00000429747 CASC4Q6P4E1 433 aa13.53□□□□□ -0.24
CPNE4-201ENST00000429747 HAUS6Q7Z4H7 955 aa13.53□□□□□ -0.24
CPNE4-201ENST00000429747 C18orf8Q96DM3 657 aa13.53□□□□□ -0.24
CPNE4-201ENST00000429747 C9orf72Q96LT7 481 aa13.53□□□□□ -0.24
CPNE4-201ENST00000429747 FAM118BQ9BPY3 351 aa13.53□□□□□ -0.24
CPNE4-201ENST00000429747 MRPL47Q9HD33 250 aaKnown RBP13.53□□□□□ -0.24
CPNE4-201ENST00000429747 GDF3Q9NR23 364 aa13.53□□□□□ -0.24
CPNE4-201ENST00000429747 RGPD1P0DJD0 1748 aa13.53□□□□□ -0.24
CPNE4-201ENST00000429747 RAD17O75943 681 aa13.53□□□□□ -0.24
CPNE4-201ENST00000429747 BBS9Q3SYG4 887 aa13.53□□□□□ -0.24
CPNE4-201ENST00000429747 ZNF394Q53GI3 561 aa13.53□□□□□ -0.24
CPNE4-201ENST00000429747 BSPRYQ5W0U4 402 aa13.53□□□□□ -0.24
CPNE4-201ENST00000429747 EPM2AIP1Q7L775 607 aaPredicted RBP13.53□□□□□ -0.24
CPNE4-201ENST00000429747 ARHGAP24Q8N264 748 aa13.53□□□□□ -0.24
CPNE4-201ENST00000429747 SGSM3Q96HU1 749 aa13.53□□□□□ -0.24
CPNE4-201ENST00000429747 FGFR1OP2Q9NVK5 253 aa13.53□□□□□ -0.24
CPNE4-201ENST00000429747 SLIT3O75094 1523 aa13.52□□□□□ -0.24
CPNE4-201ENST00000429747 CCT8L1PA6NM43 557 aa13.52□□□□□ -0.24
CPNE4-201ENST00000429747 GOLGA8MH3BSY2 632 aa13.52□□□□□ -0.24
CPNE4-201ENST00000429747 SPAG7O75391 227 aa13.52□□□□□ -0.24
CPNE4-201ENST00000429747 STAM2O75886 525 aa13.52□□□□□ -0.24
CPNE4-201ENST00000429747 TAL1P17542 331 aaPredicted RBP13.52□□□□□ -0.24
CPNE4-201ENST00000429747 CYB5D1Q6P9G0 228 aa13.52□□□□□ -0.24
CPNE4-201ENST00000429747 ZNF662Q6ZS27 426 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms