RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 RSBN1LQ6PCB5 846 aaPredicted RBP9.46□□□□□ -0.9
GABPB1-205ENST00000429662 FOXR1Q6PIV2 292 aa9.46□□□□□ -0.9
GABPB1-205ENST00000429662 TMEM179Q6ZVK1 233 aa9.46□□□□□ -0.9
GABPB1-205ENST00000429662 YTHDF3Q7Z739 585 aaKnown RBP9.46□□□□□ -0.9
GABPB1-205ENST00000429662 TADA2BQ86TJ2 420 aa9.46□□□□□ -0.9
GABPB1-205ENST00000429662 FBXO11Q86XK2 927 aa9.46□□□□□ -0.9
GABPB1-205ENST00000429662 CATSPER3Q86XQ3 398 aa9.46□□□□□ -0.9
GABPB1-205ENST00000429662 GLIS3Q8NEA6 775 aa9.46□□□□□ -0.9
GABPB1-205ENST00000429662 CASKIN2Q8WXE0 1202 aa9.46□□□□□ -0.9
GABPB1-205ENST00000429662 IFT81Q8WYA0 676 aa9.46□□□□□ -0.9
GABPB1-205ENST00000429662 ATP6V1G3Q96LB4 118 aa9.46□□□□□ -0.9
GABPB1-205ENST00000429662 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.46□□□□□ -0.9
GABPB1-205ENST00000429662 EHMT1Q9H9B1 1298 aa9.46□□□□□ -0.9
GABPB1-205ENST00000429662 DDX4Q9NQI0 724 aaKnown RBP9.46□□□□□ -0.9
GABPB1-205ENST00000429662 FAM114A2Q9NRY5 505 aa9.46□□□□□ -0.9
GABPB1-205ENST00000429662 PI4KBQ9UBF8 816 aa9.46□□□□□ -0.9
GABPB1-205ENST00000429662 NAGPAQ9UK23 515 aa9.46□□□□□ -0.9
GABPB1-205ENST00000429662 NFU1Q9UMS0 254 aa9.46□□□□□ -0.9
GABPB1-205ENST00000429662 NENFQ9UMX5 172 aa9.46□□□□□ -0.9
GABPB1-205ENST00000429662 ATAD5Q96QE3 1844 aa9.45□□□□□ -0.9
GABPB1-205ENST00000429662 GRIN2DO15399 1336 aa9.45□□□□□ -0.9
GABPB1-205ENST00000429662 TESPA1A2RU30 521 aaPredicted RBP9.45□□□□□ -0.9
GABPB1-205ENST00000429662 PIK3CDO00329 1044 aa9.45□□□□□ -0.9
GABPB1-205ENST00000429662 KCNK3O14649 394 aa9.45□□□□□ -0.9
GABPB1-205ENST00000429662 MEIS2O14770 477 aa9.45□□□□□ -0.9
GABPB1-205ENST00000429662 TRIM66O15016 1216 aa9.45□□□□□ -0.9
GABPB1-205ENST00000429662 EVI5O60447 810 aa9.45□□□□□ -0.9
GABPB1-205ENST00000429662 KIAA0754O94854 1291 aa9.45□□□□□ -0.9
GABPB1-205ENST00000429662 ERLIN2O94905 339 aa9.45□□□□□ -0.9
GABPB1-205ENST00000429662 FTCDO95954 541 aa9.45□□□□□ -0.9
GABPB1-205ENST00000429662 NR3C1P04150 777 aa9.45□□□□□ -0.9
GABPB1-205ENST00000429662 GBP1P32455 592 aa9.45□□□□□ -0.9
GABPB1-205ENST00000429662 PSMC2P35998 433 aaKnown RBP9.45□□□□□ -0.9
GABPB1-205ENST00000429662 SLC16A2P36021 539 aa9.45□□□□□ -0.9
GABPB1-205ENST00000429662 JAM2P57087 298 aa9.45□□□□□ -0.9
GABPB1-205ENST00000429662 SPIRE1Q08AE8 756 aa9.45□□□□□ -0.9
GABPB1-205ENST00000429662 PPP2R5AQ15172 486 aa9.45□□□□□ -0.9
GABPB1-205ENST00000429662 EPHA7Q15375 998 aa9.45□□□□□ -0.9
GABPB1-205ENST00000429662 CERKLQ49MI3 558 aaPredicted RBP9.45□□□□□ -0.9
GABPB1-205ENST00000429662 AGBL2Q5U5Z8 902 aa9.45□□□□□ -0.9
GABPB1-205ENST00000429662 DPY19L2P1Q6NXN4 242 aa9.45□□□□□ -0.9
GABPB1-205ENST00000429662 CDC42EP5Q6NZY7 148 aa9.45□□□□□ -0.9
GABPB1-205ENST00000429662 BTNL9Q6UXG8 535 aa9.45□□□□□ -0.9
GABPB1-205ENST00000429662 KCTD1Q719H9 257 aa9.45□□□□□ -0.9
GABPB1-205ENST00000429662 Q7L0L9 218 aa9.45□□□□□ -0.9
GABPB1-205ENST00000429662 ZNF571Q7Z3V5 609 aaPredicted RBP9.45□□□□□ -0.9
GABPB1-205ENST00000429662 PEX26Q7Z412 305 aa9.45□□□□□ -0.9
GABPB1-205ENST00000429662 PODNQ7Z5L7 613 aa9.45□□□□□ -0.9
GABPB1-205ENST00000429662 CROCCP2Q86T23 111 aa9.45□□□□□ -0.9
GABPB1-205ENST00000429662 LRRC57Q8N9N7 239 aa9.45□□□□□ -0.9
GABPB1-205ENST00000429662 AGBL3Q8NEM8 1001 aa9.45□□□□□ -0.9
GABPB1-205ENST00000429662 TPCN2Q8NHX9 752 aa9.45□□□□□ -0.9
GABPB1-205ENST00000429662 ARL8AQ96BM9 186 aa9.45□□□□□ -0.9
GABPB1-205ENST00000429662 ZBED3Q96IU2 234 aaPredicted RBP9.45□□□□□ -0.9
GABPB1-205ENST00000429662 MS4A14Q96JA4 679 aa9.45□□□□□ -0.9
GABPB1-205ENST00000429662 CLMNQ96JQ2 1002 aa9.45□□□□□ -0.9
GABPB1-205ENST00000429662 ZDHHC15Q96MV8 337 aa9.45□□□□□ -0.9
GABPB1-205ENST00000429662 PSMB7Q99436 277 aa9.45□□□□□ -0.9
GABPB1-205ENST00000429662 IDI2Q9BXS1 227 aa9.45□□□□□ -0.9
GABPB1-205ENST00000429662 STK33Q9BYT3 514 aa9.45□□□□□ -0.9
GABPB1-205ENST00000429662 ADAM33Q9BZ11 813 aa9.45□□□□□ -0.9
GABPB1-205ENST00000429662 EPN3Q9H201 632 aa9.45□□□□□ -0.9
GABPB1-205ENST00000429662 ZHX3Q9H4I2 956 aa9.45□□□□□ -0.9
GABPB1-205ENST00000429662 TBC1D7Q9P0N9 293 aa9.45□□□□□ -0.9
GABPB1-205ENST00000429662 STXBP5LQ9Y2K9 1186 aa9.45□□□□□ -0.9
GABPB1-205ENST00000429662 USP17L15C9J2P7 530 aa9.44□□□□□ -0.9
GABPB1-205ENST00000429662 USP17L13C9JLJ4 530 aa9.44□□□□□ -0.9
GABPB1-205ENST00000429662 USP17L11C9JVI0 530 aa9.44□□□□□ -0.9
GABPB1-205ENST00000429662 USP17L18D6R9N7 530 aa9.44□□□□□ -0.9
GABPB1-205ENST00000429662 USP17L22D6RA61 530 aa9.44□□□□□ -0.9
GABPB1-205ENST00000429662 USP17L17D6RBQ6 530 aa9.44□□□□□ -0.9
GABPB1-205ENST00000429662 USP17L19D6RCP7 530 aa9.44□□□□□ -0.9
GABPB1-205ENST00000429662 USP17L20D6RJB6 530 aa9.44□□□□□ -0.9
GABPB1-205ENST00000429662 GCOM1H8Y6P7 765 aaPredicted RBP9.44□□□□□ -0.9
GABPB1-205ENST00000429662 WNT10BO00744 389 aa9.44□□□□□ -0.9
GABPB1-205ENST00000429662 NDUFAB1O14561 156 aa9.44□□□□□ -0.9
GABPB1-205ENST00000429662 RAD51CO43502 376 aa9.44□□□□□ -0.9
GABPB1-205ENST00000429662 CEP104O60308 925 aa9.44□□□□□ -0.9
GABPB1-205ENST00000429662 MYZAPP0CAP1 466 aa9.44□□□□□ -0.9
GABPB1-205ENST00000429662 SPATA31C1P0DKV0 1188 aa9.44□□□□□ -0.9
GABPB1-205ENST00000429662 EEF2P13639 858 aaKnown RBP9.44□□□□□ -0.9
GABPB1-205ENST00000429662 NR1D1P20393 614 aa9.44□□□□□ -0.9
GABPB1-205ENST00000429662 CCT5P48643 541 aa9.44□□□□□ -0.9
GABPB1-205ENST00000429662 EIF3BP55884 814 aaKnown RBP9.44□□□□□ -0.9
GABPB1-205ENST00000429662 USP17L24Q0WX57 530 aa9.44□□□□□ -0.9
GABPB1-205ENST00000429662 DRP2Q13474 957 aa9.44□□□□□ -0.9
GABPB1-205ENST00000429662 PRR16Q569H4 304 aa9.44□□□□□ -0.9
GABPB1-205ENST00000429662 SYDE2Q5VT97 1194 aa9.44□□□□□ -0.9
GABPB1-205ENST00000429662 APOBEC3HQ6NTF7 200 aaKnown RBP9.44□□□□□ -0.9
GABPB1-205ENST00000429662 TATDN1Q6P1N9 297 aa9.44□□□□□ -0.9
GABPB1-205ENST00000429662 USP17L6PQ6QN14 398 aa9.44□□□□□ -0.9
GABPB1-205ENST00000429662 THSD4Q6ZMP0 1018 aa9.44□□□□□ -0.9
GABPB1-205ENST00000429662 ARMC9Q7Z3E5 817 aa9.44□□□□□ -0.9
GABPB1-205ENST00000429662 SFR1Q86XK3 245 aa9.44□□□□□ -0.9
GABPB1-205ENST00000429662 WNK4Q96J92 1243 aa9.44□□□□□ -0.9
GABPB1-205ENST00000429662 REEP2Q9BRK0 252 aa9.44□□□□□ -0.9
GABPB1-205ENST00000429662 RAB17Q9H0T7 212 aa9.44□□□□□ -0.9
GABPB1-205ENST00000429662 TMBIM4Q9HC24 238 aa9.44□□□□□ -0.9
GABPB1-205ENST00000429662 AMFRQ9UKV5 643 aa9.44□□□□□ -0.9
GABPB1-205ENST00000429662 RABGAP1Q9Y3P9 1069 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 273.3 ms