RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 ARID2Q68CP9 1835 aa8.7□□□□□ -1.02
HMGA1P4-201ENST00000428643 DCDC2CA8MYV0 355 aa8.7□□□□□ -1.02
HMGA1P4-201ENST00000428643 K7ERI5 159 aa8.7□□□□□ -1.02
HMGA1P4-201ENST00000428643 ASAP2O43150 1006 aa8.7□□□□□ -1.02
HMGA1P4-201ENST00000428643 SLC34A2O95436 690 aa8.7□□□□□ -1.02
HMGA1P4-201ENST00000428643 PRKCBP05771 671 aa8.7□□□□□ -1.02
HMGA1P4-201ENST00000428643 CD44P16070 742 aaKnown RBP8.7□□□□□ -1.02
HMGA1P4-201ENST00000428643 EN2P19622 333 aaPredicted RBP8.7□□□□□ -1.02
HMGA1P4-201ENST00000428643 SCP2P22307 547 aa8.7□□□□□ -1.02
HMGA1P4-201ENST00000428643 PRCPP42785 496 aa8.7□□□□□ -1.02
HMGA1P4-201ENST00000428643 STX17P56962 302 aa8.7□□□□□ -1.02
HMGA1P4-201ENST00000428643 PTENP60484 403 aa8.7□□□□□ -1.02
HMGA1P4-201ENST00000428643 TLE2Q04725 743 aa8.7□□□□□ -1.02
HMGA1P4-201ENST00000428643 BMT2Q1RMZ1 405 aa8.7□□□□□ -1.02
HMGA1P4-201ENST00000428643 CDCA2Q69YH5 1023 aaPredicted RBP8.7□□□□□ -1.02
HMGA1P4-201ENST00000428643 SLC39A5Q6ZMH5 540 aa8.7□□□□□ -1.02
HMGA1P4-201ENST00000428643 EPM2AIP1Q7L775 607 aaPredicted RBP8.7□□□□□ -1.02
HMGA1P4-201ENST00000428643 ZNF720Q7Z2F6 126 aa8.7□□□□□ -1.02
HMGA1P4-201ENST00000428643 NECAB2Q7Z6G3 386 aa8.7□□□□□ -1.02
HMGA1P4-201ENST00000428643 FAM126BQ8IXS8 530 aa8.7□□□□□ -1.02
HMGA1P4-201ENST00000428643 ZNF710Q8N1W2 664 aa8.7□□□□□ -1.02
HMGA1P4-201ENST00000428643 NME8Q8N427 588 aa8.7□□□□□ -1.02
HMGA1P4-201ENST00000428643 GUF1Q8N442 669 aaKnown RBP8.7□□□□□ -1.02
HMGA1P4-201ENST00000428643 CCDC155Q8N6L0 562 aa8.7□□□□□ -1.02
HMGA1P4-201ENST00000428643 NELFBQ8WX92 580 aa8.7□□□□□ -1.02
HMGA1P4-201ENST00000428643 DHX38Q92620 1227 aaKnown RBP8.7□□□□□ -1.02
HMGA1P4-201ENST00000428643 WNT8BQ93098 351 aa8.7□□□□□ -1.02
HMGA1P4-201ENST00000428643 HVCN1Q96D96 273 aa8.7□□□□□ -1.02
HMGA1P4-201ENST00000428643 ACCSQ96QU6 501 aa8.7□□□□□ -1.02
HMGA1P4-201ENST00000428643 CTAGE1Q96RT6 745 aa8.7□□□□□ -1.02
HMGA1P4-201ENST00000428643 OSMRQ99650 979 aa8.7□□□□□ -1.02
HMGA1P4-201ENST00000428643 TSG101Q99816 390 aa8.7□□□□□ -1.02
HMGA1P4-201ENST00000428643 GCOM2Q9BZD3 368 aaPredicted RBP8.7□□□□□ -1.02
HMGA1P4-201ENST00000428643 ST6GALNAC4Q9H4F1 302 aa8.7□□□□□ -1.02
HMGA1P4-201ENST00000428643 EXOC7Q9UPT5 735 aa8.7□□□□□ -1.02
HMGA1P4-201ENST00000428643 ATP11BQ9Y2G3 1177 aa8.7□□□□□ -1.02
HMGA1P4-201ENST00000428643 TRPV2Q9Y5S1 764 aa8.7□□□□□ -1.02
HMGA1P4-201ENST00000428643 CDY2AQ9Y6F7 541 aa8.7□□□□□ -1.02
HMGA1P4-201ENST00000428643 SCN10AQ9Y5Y9 1956 aa8.7□□□□□ -1.02
HMGA1P4-201ENST00000428643 BICDL2A1A5D9 508 aa8.69□□□□□ -1.02
HMGA1P4-201ENST00000428643 BECN2A8MW95 431 aa8.69□□□□□ -1.02
HMGA1P4-201ENST00000428643 PPP1R3GB7ZBB8 358 aa8.69□□□□□ -1.02
HMGA1P4-201ENST00000428643 HNRNPDLO14979 420 aaKnown RBP8.69□□□□□ -1.02
HMGA1P4-201ENST00000428643 CAND2O75155 1236 aa8.69□□□□□ -1.02
HMGA1P4-201ENST00000428643 PPP1R37O75864 691 aa8.69□□□□□ -1.02
HMGA1P4-201ENST00000428643 ERLIN2O94905 339 aa8.69□□□□□ -1.02
HMGA1P4-201ENST00000428643 CAVIN2O95810 425 aa8.69□□□□□ -1.02
HMGA1P4-201ENST00000428643 DARSP14868 501 aaKnown RBP8.69□□□□□ -1.02
HMGA1P4-201ENST00000428643 SFPQP23246 707 aaKnown RBP eCLIP8.69□□□□□ -1.02
HMGA1P4-201ENST00000428643 ERCC5P28715 1186 aaPredicted RBP8.69□□□□□ -1.02
HMGA1P4-201ENST00000428643 ZNF165P49910 485 aa8.69□□□□□ -1.02
HMGA1P4-201ENST00000428643 LIG4P49917 911 aa8.69□□□□□ -1.02
HMGA1P4-201ENST00000428643 CDK7P50613 346 aa8.69□□□□□ -1.02
HMGA1P4-201ENST00000428643 CRYBB1P53674 252 aaPredicted RBP8.69□□□□□ -1.02
HMGA1P4-201ENST00000428643 GTF2BQ00403 316 aa8.69□□□□□ -1.02
HMGA1P4-201ENST00000428643 CDC42EP1Q00587 391 aa8.69□□□□□ -1.02
HMGA1P4-201ENST00000428643 MBTD1Q05BQ5 628 aa8.69□□□□□ -1.02
HMGA1P4-201ENST00000428643 KCNA1Q09470 495 aa8.69□□□□□ -1.02
HMGA1P4-201ENST00000428643 MAPK6Q16659 721 aa8.69□□□□□ -1.02
HMGA1P4-201ENST00000428643 KNOP1Q1ED39 458 aaKnown RBP8.69□□□□□ -1.02
HMGA1P4-201ENST00000428643 COBLL1Q53SF7 1204 aa8.69□□□□□ -1.02
HMGA1P4-201ENST00000428643 HS2ST1Q7LGA3 356 aa8.69□□□□□ -1.02
HMGA1P4-201ENST00000428643 MAP4K3Q8IVH8 894 aa8.69□□□□□ -1.02
HMGA1P4-201ENST00000428643 AOPEPQ8N6M6 819 aa8.69□□□□□ -1.02
HMGA1P4-201ENST00000428643 RNF214Q8ND24 703 aa8.69□□□□□ -1.02
HMGA1P4-201ENST00000428643 FAM200AQ8TCP9 573 aa8.69□□□□□ -1.02
HMGA1P4-201ENST00000428643 P2RX5Q93086 422 aa8.69□□□□□ -1.02
HMGA1P4-201ENST00000428643 DHTKD1Q96HY7 919 aaPredicted RBP8.69□□□□□ -1.02
HMGA1P4-201ENST00000428643 NTPCRQ9BSD7 190 aaKnown RBP8.69□□□□□ -1.02
HMGA1P4-201ENST00000428643 MRPL4Q9BYD3 311 aaKnown RBP8.69□□□□□ -1.02
HMGA1P4-201ENST00000428643 CELF4Q9BZC1 486 aaKnown RBP8.69□□□□□ -1.02
HMGA1P4-201ENST00000428643 ADAMTS10Q9H324 1103 aa8.69□□□□□ -1.02
HMGA1P4-201ENST00000428643 TMEM206Q9H813 350 aa8.69□□□□□ -1.02
HMGA1P4-201ENST00000428643 PRMT7Q9NVM4 692 aaPredicted RBP8.69□□□□□ -1.02
HMGA1P4-201ENST00000428643 TBX20Q9UMR3 447 aa8.69□□□□□ -1.02
HMGA1P4-201ENST00000428643 LOXHD1Q8IVV2 1947 aa8.69□□□□□ -1.02
HMGA1P4-201ENST00000428643 ZMYM2Q9UBW7 1377 aa8.69□□□□□ -1.02
HMGA1P4-201ENST00000428643 TRIM49BA6NDI0 452 aa8.68□□□□□ -1.02
HMGA1P4-201ENST00000428643 CALUO43852 315 aaPredicted RBP8.68□□□□□ -1.02
HMGA1P4-201ENST00000428643 GPR32O75388 356 aa8.68□□□□□ -1.02
HMGA1P4-201ENST00000428643 CSDE1O75534 798 aaKnown RBP8.68□□□□□ -1.02
HMGA1P4-201ENST00000428643 HARSP12081 509 aaKnown RBP8.68□□□□□ -1.02
HMGA1P4-201ENST00000428643 EIF4BP23588 611 aaKnown RBP8.68□□□□□ -1.02
HMGA1P4-201ENST00000428643 CCNE1P24864 410 aa8.68□□□□□ -1.02
HMGA1P4-201ENST00000428643 HOXD13P35453 343 aa8.68□□□□□ -1.02
HMGA1P4-201ENST00000428643 MATR3P43243 847 aaKnown RBP eCLIP8.68□□□□□ -1.02
HMGA1P4-201ENST00000428643 MYL5Q02045 173 aa8.68□□□□□ -1.02
HMGA1P4-201ENST00000428643 LRRC63Q05C16 580 aa8.68□□□□□ -1.02
HMGA1P4-201ENST00000428643 BFSP2Q13515 415 aa8.68□□□□□ -1.02
HMGA1P4-201ENST00000428643 PRPF4BQ13523 1007 aaKnown RBP8.68□□□□□ -1.02
HMGA1P4-201ENST00000428643 SNX17Q15036 470 aa8.68□□□□□ -1.02
HMGA1P4-201ENST00000428643 TPD52L1Q16890 204 aaPredicted RBP8.68□□□□□ -1.02
HMGA1P4-201ENST00000428643 LRRC26Q2I0M4 334 aa8.68□□□□□ -1.02
HMGA1P4-201ENST00000428643 TRIM71Q2Q1W2 868 aaKnown RBP8.68□□□□□ -1.02
HMGA1P4-201ENST00000428643 CT47A1Q5JQC4 288 aaPredicted RBP8.68□□□□□ -1.02
HMGA1P4-201ENST00000428643 TAS1R3Q7RTX0 852 aa8.68□□□□□ -1.02
HMGA1P4-201ENST00000428643 CATSPER4Q7RTX7 472 aa8.68□□□□□ -1.02
HMGA1P4-201ENST00000428643 ANKRD33Q7Z3H0 272 aa8.68□□□□□ -1.02
HMGA1P4-201ENST00000428643 SRGAP1Q7Z6B7 1085 aa8.68□□□□□ -1.02
HMGA1P4-201ENST00000428643 RPAINQ86UA6 219 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms