RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 INTS2Q9H0H0 1204 aaKnown RBP11.33□□□□□ -0.6
HDAC9-210ENST00000428307 TAF1DQ9H5J8 278 aaPredicted RBP11.33□□□□□ -0.6
HDAC9-210ENST00000428307 ATP6V0A4Q9HBG4 840 aa11.33□□□□□ -0.6
HDAC9-210ENST00000428307 PDLIM7Q9NR12 457 aa11.33□□□□□ -0.6
HDAC9-210ENST00000428307 CYP2C8P10632 490 aa11.33□□□□□ -0.6
HDAC9-210ENST00000428307 KLRC1P26715 233 aa11.33□□□□□ -0.6
HDAC9-210ENST00000428307 GJA5P36382 358 aa11.33□□□□□ -0.6
HDAC9-210ENST00000428307 CLCN6P51797 869 aa11.33□□□□□ -0.6
HDAC9-210ENST00000428307 JAM2P57087 298 aa11.33□□□□□ -0.6
HDAC9-210ENST00000428307 MKRN3Q13064 507 aaKnown RBP11.33□□□□□ -0.6
HDAC9-210ENST00000428307 MOGSQ13724 837 aa11.33□□□□□ -0.6
HDAC9-210ENST00000428307 DRAP1Q14919 205 aaPredicted RBP11.33□□□□□ -0.6
HDAC9-210ENST00000428307 PHLDB3Q6NSJ2 640 aa11.33□□□□□ -0.6
HDAC9-210ENST00000428307 MAP4K3Q8IVH8 894 aa11.33□□□□□ -0.6
HDAC9-210ENST00000428307 GPR161Q8N6U8 529 aaKnown RBP11.33□□□□□ -0.6
HDAC9-210ENST00000428307 MCPH1Q8NEM0 835 aa11.33□□□□□ -0.6
HDAC9-210ENST00000428307 PLEKHO2Q8TD55 490 aa11.33□□□□□ -0.6
HDAC9-210ENST00000428307 SLC10A4Q96EP9 437 aa11.33□□□□□ -0.6
HDAC9-210ENST00000428307 PARD6BQ9BYG5 372 aa11.33□□□□□ -0.6
HDAC9-210ENST00000428307 MAF1Q9H063 256 aa11.33□□□□□ -0.6
HDAC9-210ENST00000428307 POLR3FQ9H1D9 316 aaPredicted RBP11.33□□□□□ -0.6
HDAC9-210ENST00000428307 FBXL5Q9UKA1 691 aa11.33□□□□□ -0.6
HDAC9-210ENST00000428307 EXOC7Q9UPT5 735 aa11.33□□□□□ -0.6
HDAC9-210ENST00000428307 MAFBQ9Y5Q3 323 aaPredicted RBP11.33□□□□□ -0.6
HDAC9-210ENST00000428307 HNRNPDLO14979 420 aaKnown RBP11.32□□□□□ -0.6
HDAC9-210ENST00000428307 PJA2O43164 708 aa11.32□□□□□ -0.6
HDAC9-210ENST00000428307 EVI5O60447 810 aa11.32□□□□□ -0.6
HDAC9-210ENST00000428307 FARP2O94887 1054 aaPredicted RBP11.32□□□□□ -0.6
HDAC9-210ENST00000428307 ATG7O95352 703 aa11.32□□□□□ -0.6
HDAC9-210ENST00000428307 GGPS1O95749 300 aa11.32□□□□□ -0.6
HDAC9-210ENST00000428307 EDNRBP24530 442 aa11.32□□□□□ -0.6
HDAC9-210ENST00000428307 SNRNP35Q16560 246 aaKnown RBP11.32□□□□□ -0.6
HDAC9-210ENST00000428307 MAP1SQ66K74 1059 aaPredicted RBP11.32□□□□□ -0.6
HDAC9-210ENST00000428307 FASTKD5Q7L8L6 764 aaKnown RBP11.32□□□□□ -0.6
HDAC9-210ENST00000428307 SLC17A8Q8NDX2 589 aa11.32□□□□□ -0.6
HDAC9-210ENST00000428307 SPIRE2Q8WWL2 714 aa11.32□□□□□ -0.6
HDAC9-210ENST00000428307 POMGNT1Q8WZA1 660 aa11.32□□□□□ -0.6
HDAC9-210ENST00000428307 RABGGTAQ92696 567 aa11.32□□□□□ -0.6
HDAC9-210ENST00000428307 IFT74Q96LB3 600 aa11.32□□□□□ -0.6
HDAC9-210ENST00000428307 NOX5Q96PH1 765 aa11.32□□□□□ -0.6
HDAC9-210ENST00000428307 MMS19Q96T76 1030 aa11.32□□□□□ -0.6
HDAC9-210ENST00000428307 POP1Q99575 1024 aaKnown RBP11.32□□□□□ -0.6
HDAC9-210ENST00000428307 LUC7LQ9NQ29 371 aaKnown RBP11.32□□□□□ -0.6
HDAC9-210ENST00000428307 APEX2Q9UBZ4 518 aa11.32□□□□□ -0.6
HDAC9-210ENST00000428307 JRKLQ9Y4A0 524 aa11.32□□□□□ -0.6
HDAC9-210ENST00000428307 BZW2Q9Y6E2 419 aaKnown RBP11.32□□□□□ -0.6
HDAC9-210ENST00000428307 IGSF9BQ9UPX0 1349 aa11.32□□□□□ -0.6
HDAC9-210ENST00000428307 GSTTP1A0A1W2PQM5 241 aa11.32□□□□□ -0.6
HDAC9-210ENST00000428307 F8VZ95 297 aa11.32□□□□□ -0.6
HDAC9-210ENST00000428307 OATP04181 439 aa11.32□□□□□ -0.6
HDAC9-210ENST00000428307 ADRB2P07550 413 aa11.32□□□□□ -0.6
HDAC9-210ENST00000428307 RHOXF2BP0C7M4 288 aa11.32□□□□□ -0.6
HDAC9-210ENST00000428307 CXCR5P32302 372 aa11.32□□□□□ -0.6
HDAC9-210ENST00000428307 STAT1P42224 750 aa11.32□□□□□ -0.6
HDAC9-210ENST00000428307 KCTD2Q14681 263 aa11.32□□□□□ -0.6
HDAC9-210ENST00000428307 EMC2Q15006 297 aa11.32□□□□□ -0.6
HDAC9-210ENST00000428307 C1orf220Q5T0J3 134 aa11.32□□□□□ -0.6
HDAC9-210ENST00000428307 GPAT2Q6NUI2 795 aa11.32□□□□□ -0.6
HDAC9-210ENST00000428307 SLC39A4Q6P5W5 647 aa11.32□□□□□ -0.6
HDAC9-210ENST00000428307 C12orf56Q8IXR9 622 aa11.32□□□□□ -0.6
HDAC9-210ENST00000428307 NOA1Q8NC60 698 aaKnown RBP11.32□□□□□ -0.6
HDAC9-210ENST00000428307 LMO3Q8TAP4 145 aa11.32□□□□□ -0.6
HDAC9-210ENST00000428307 BICD1Q96G01 975 aa11.32□□□□□ -0.6
HDAC9-210ENST00000428307 ALS2CR12Q96Q35 445 aa11.32□□□□□ -0.6
HDAC9-210ENST00000428307 RHOXF2Q9BQY4 288 aa11.32□□□□□ -0.6
HDAC9-210ENST00000428307 CCDC94Q9BW85 323 aaPredicted RBP11.32□□□□□ -0.6
HDAC9-210ENST00000428307 STK33Q9BYT3 514 aa11.32□□□□□ -0.6
HDAC9-210ENST00000428307 C17orf75Q9HAS0 396 aa11.32□□□□□ -0.6
HDAC9-210ENST00000428307 ZNF446Q9NWS9 450 aa11.32□□□□□ -0.6
HDAC9-210ENST00000428307 ANO9A1A5B4 782 aa11.31□□□□□ -0.6
HDAC9-210ENST00000428307 NCK2O43639 380 aa11.31□□□□□ -0.6
HDAC9-210ENST00000428307 ARIH2O95376 493 aa11.31□□□□□ -0.6
HDAC9-210ENST00000428307 SLC25A27O95847 323 aa11.31□□□□□ -0.6
HDAC9-210ENST00000428307 OSBPP22059 807 aa11.31□□□□□ -0.6
HDAC9-210ENST00000428307 SOX5P35711 763 aa11.31□□□□□ -0.6
HDAC9-210ENST00000428307 CETN1Q12798 172 aa11.31□□□□□ -0.6
HDAC9-210ENST00000428307 NEDD9Q14511 834 aa11.31□□□□□ -0.6
HDAC9-210ENST00000428307 ALKBH5Q6P6C2 394 aaKnown RBP11.31□□□□□ -0.6
HDAC9-210ENST00000428307 TXLNBQ8N3L3 684 aa11.31□□□□□ -0.6
HDAC9-210ENST00000428307 PCYT2Q99447 389 aa11.31□□□□□ -0.6
HDAC9-210ENST00000428307 UBE2TQ9NPD8 197 aaPredicted RBP11.31□□□□□ -0.6
HDAC9-210ENST00000428307 NAGPAQ9UK23 515 aa11.31□□□□□ -0.6
HDAC9-210ENST00000428307 FOXN3O00409 490 aaPredicted RBP11.31□□□□□ -0.6
HDAC9-210ENST00000428307 MARK3P27448 753 aa11.31□□□□□ -0.6
HDAC9-210ENST00000428307 TCF7P36402 384 aaPredicted RBP11.31□□□□□ -0.6
HDAC9-210ENST00000428307 PRKCIP41743 596 aa11.31□□□□□ -0.6
HDAC9-210ENST00000428307 DNA2P51530 1060 aa11.31□□□□□ -0.6
HDAC9-210ENST00000428307 STAT5BP51692 787 aa11.31□□□□□ -0.6
HDAC9-210ENST00000428307 MAP2K1Q02750 393 aaPredicted RBP11.31□□□□□ -0.6
HDAC9-210ENST00000428307 NAB2Q15742 525 aa11.31□□□□□ -0.6
HDAC9-210ENST00000428307 HSDL1Q3SXM5 330 aa11.31□□□□□ -0.6
HDAC9-210ENST00000428307 TMEM63BQ5T3F8 832 aa11.31□□□□□ -0.6
HDAC9-210ENST00000428307 LDLRAD1Q5T700 205 aa11.31□□□□□ -0.6
HDAC9-210ENST00000428307 TAS1R3Q7RTX0 852 aa11.31□□□□□ -0.6
HDAC9-210ENST00000428307 COG1Q8WTW3 980 aa11.31□□□□□ -0.6
HDAC9-210ENST00000428307 SLC7A3Q8WY07 619 aa11.31□□□□□ -0.6
HDAC9-210ENST00000428307 ELMO3Q96BJ8 720 aa11.31□□□□□ -0.6
HDAC9-210ENST00000428307 MMP19Q99542 508 aa11.31□□□□□ -0.6
HDAC9-210ENST00000428307 GPR88Q9GZN0 384 aa11.31□□□□□ -0.6
HDAC9-210ENST00000428307 TMEM117Q9H0C3 514 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms