RNA–Protein interactions for RNA: ENST00000428017.5

VARS2-203, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 1,103 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-203ENST00000428017 PADI3Q9ULW8 664 aa16.71■□□□□ 0.27
VARS2-203ENST00000428017 ST3GAL5Q9UNP4 418 aa16.71■□□□□ 0.27
VARS2-203ENST00000428017 ARID2Q68CP9 1835 aa16.7■□□□□ 0.26
VARS2-203ENST00000428017 LOXHD1Q8IVV2 1947 aa16.7■□□□□ 0.26
VARS2-203ENST00000428017 ALPK3Q96L96 1907 aa16.7■□□□□ 0.26
VARS2-203ENST00000428017 PVALEFA0A1B0GWK0 134 aa16.7■□□□□ 0.26
VARS2-203ENST00000428017 K7ENM7 598 aa16.7■□□□□ 0.26
VARS2-203ENST00000428017 CSDE1O75534 798 aaKnown RBP16.7■□□□□ 0.26
VARS2-203ENST00000428017 PTMSP20962 102 aa16.7■□□□□ 0.26
VARS2-203ENST00000428017 SCP2P22307 547 aa16.7■□□□□ 0.26
VARS2-203ENST00000428017 ABCD1P33897 745 aa16.7■□□□□ 0.26
VARS2-203ENST00000428017 MCM4P33991 863 aa16.7■□□□□ 0.26
VARS2-203ENST00000428017 STRN3Q13033 797 aa16.7■□□□□ 0.26
VARS2-203ENST00000428017 POSTNQ15063 836 aa16.7■□□□□ 0.26
VARS2-203ENST00000428017 PCBP1Q15365 356 aaKnown RBP eCLIP16.7■□□□□ 0.26
VARS2-203ENST00000428017 MAPK6Q16659 721 aa16.7■□□□□ 0.26
VARS2-203ENST00000428017 PLEKHG4Q58EX7 1191 aa16.7■□□□□ 0.26
VARS2-203ENST00000428017 CDCA2Q69YH5 1023 aaPredicted RBP16.7■□□□□ 0.26
VARS2-203ENST00000428017 CNNM4Q6P4Q7 775 aa16.7■□□□□ 0.26
VARS2-203ENST00000428017 CNKSR3Q6P9H4 555 aa16.7■□□□□ 0.26
VARS2-203ENST00000428017 FAM43BQ6ZT52 329 aaPredicted RBP16.7■□□□□ 0.26
VARS2-203ENST00000428017 UNC13DQ70J99 1090 aa16.7■□□□□ 0.26
VARS2-203ENST00000428017 FAM228AQ86W67 206 aa16.7■□□□□ 0.26
VARS2-203ENST00000428017 SFR1Q86XK3 245 aa16.7■□□□□ 0.26
VARS2-203ENST00000428017 IFNLR1Q8IU57 520 aaPredicted RBP16.7■□□□□ 0.26
VARS2-203ENST00000428017 DBF4BQ8NFT6 615 aa16.7■□□□□ 0.26
VARS2-203ENST00000428017 KIFC3Q9BVG8 833 aa16.7■□□□□ 0.26
VARS2-203ENST00000428017 AGO3Q9H9G7 860 aaKnown RBP16.7■□□□□ 0.26
VARS2-203ENST00000428017 MRPL44Q9H9J2 332 aaKnown RBP16.7■□□□□ 0.26
VARS2-203ENST00000428017 K7ERI5 159 aa16.69■□□□□ 0.26
VARS2-203ENST00000428017 SMC2O95347 1197 aa16.69■□□□□ 0.26
VARS2-203ENST00000428017 FGBP02675 491 aa16.69■□□□□ 0.26
VARS2-203ENST00000428017 ZSCAN20P17040 1043 aaPredicted RBP16.69■□□□□ 0.26
VARS2-203ENST00000428017 FGFR4P22455 802 aa16.69■□□□□ 0.26
VARS2-203ENST00000428017 CASP1P29466 404 aa16.69■□□□□ 0.26
VARS2-203ENST00000428017 MBTD1Q05BQ5 628 aa16.69■□□□□ 0.26
VARS2-203ENST00000428017 COASYQ13057 564 aa16.69■□□□□ 0.26
VARS2-203ENST00000428017 IKBKEQ14164 716 aa16.69■□□□□ 0.26
VARS2-203ENST00000428017 GPNMBQ14956 572 aa16.69■□□□□ 0.26
VARS2-203ENST00000428017 STXBP4Q6ZWJ1 553 aa16.69■□□□□ 0.26
VARS2-203ENST00000428017 NTPCRQ9BSD7 190 aaKnown RBP16.69■□□□□ 0.26
VARS2-203ENST00000428017 FTHL17Q9BXU8 183 aa16.69■□□□□ 0.26
VARS2-203ENST00000428017 UBE2OQ9C0C9 1292 aaKnown RBP16.69■□□□□ 0.26
VARS2-203ENST00000428017 MTIF3Q9H2K0 278 aaKnown RBP16.69■□□□□ 0.26
VARS2-203ENST00000428017 ERVK-5Q9HDB9 667 aa16.69■□□□□ 0.26
VARS2-203ENST00000428017 EXOC1Q9NV70 894 aa16.69■□□□□ 0.26
VARS2-203ENST00000428017 PRMT7Q9NVM4 692 aaPredicted RBP16.69■□□□□ 0.26
VARS2-203ENST00000428017 TRIP12Q14669 1992 aaPredicted RBP16.69■□□□□ 0.26
VARS2-203ENST00000428017 FRMD3A2A2Y4 597 aa16.68■□□□□ 0.26
VARS2-203ENST00000428017 DENND3A2RUS2 1198 aa16.68■□□□□ 0.26
VARS2-203ENST00000428017 EFCAB14O75071 495 aa16.68■□□□□ 0.26
VARS2-203ENST00000428017 MBD3O95983 291 aa16.68■□□□□ 0.26
VARS2-203ENST00000428017 RPN1P04843 607 aaKnown RBP16.68■□□□□ 0.26
VARS2-203ENST00000428017 PRKCBP05771 671 aa16.68■□□□□ 0.26
VARS2-203ENST00000428017 MAPTP10636 758 aaKnown RBP16.68■□□□□ 0.26
VARS2-203ENST00000428017 ZNF365Q70YC5 407 aa16.68■□□□□ 0.26
VARS2-203ENST00000428017 HAUS6Q7Z4H7 955 aa16.68■□□□□ 0.26
VARS2-203ENST00000428017 PRIMPOLQ96LW4 560 aa16.68■□□□□ 0.26
VARS2-203ENST00000428017 OSBPL7Q9BZF2 842 aa16.68■□□□□ 0.26
VARS2-203ENST00000428017 TMEM134Q9H6X4 195 aa16.68■□□□□ 0.26
VARS2-203ENST00000428017 MINDY3Q9H8M7 445 aa16.68■□□□□ 0.26
VARS2-203ENST00000428017 TBC1D7Q9P0N9 293 aa16.68■□□□□ 0.26
VARS2-203ENST00000428017 ARHGAP28Q9P2N2 729 aa16.68■□□□□ 0.26
VARS2-203ENST00000428017 PIN4Q9Y237 131 aaKnown RBP16.68■□□□□ 0.26
VARS2-203ENST00000428017 ABHD14A-ACY1A0A1B0GW23 586 aa16.67■□□□□ 0.26
VARS2-203ENST00000428017 ZBBXA8MT70 800 aa16.67■□□□□ 0.26
VARS2-203ENST00000428017 GCNT3O95395 438 aa16.67■□□□□ 0.26
VARS2-203ENST00000428017 PRR29P0C7W0 189 aa16.67■□□□□ 0.26
VARS2-203ENST00000428017 NCKAP1LP55160 1127 aa16.67■□□□□ 0.26
VARS2-203ENST00000428017 DPYDQ12882 1025 aa16.67■□□□□ 0.26
VARS2-203ENST00000428017 PNOCQ13519 176 aa16.67■□□□□ 0.26
VARS2-203ENST00000428017 PRPF4BQ13523 1007 aaKnown RBP16.67■□□□□ 0.26
VARS2-203ENST00000428017 ALCAMQ13740 583 aa16.67■□□□□ 0.26
VARS2-203ENST00000428017 FAM26FQ5R3K3 315 aa16.67■□□□□ 0.26
VARS2-203ENST00000428017 OTOP2Q7RTS6 562 aa16.67■□□□□ 0.26
VARS2-203ENST00000428017 ELOA2Q8IYF1 753 aaPredicted RBP16.67■□□□□ 0.26
VARS2-203ENST00000428017 TMEM161BQ8NDZ6 487 aa16.67■□□□□ 0.26
VARS2-203ENST00000428017 SMARCE1Q969G3 411 aa16.67■□□□□ 0.26
VARS2-203ENST00000428017 FZD8Q9H461 694 aa16.67■□□□□ 0.26
VARS2-203ENST00000428017 CHST12Q9NRB3 414 aa16.67■□□□□ 0.26
VARS2-203ENST00000428017 OLFML3Q9NRN5 406 aa16.67■□□□□ 0.26
VARS2-203ENST00000428017 RMND1Q9NWS8 449 aa16.67■□□□□ 0.26
VARS2-203ENST00000428017 PCDHB13Q9Y5F0 798 aa16.67■□□□□ 0.26
VARS2-203ENST00000428017 ADGRA3Q8IWK6 1321 aa16.67■□□□□ 0.26
VARS2-203ENST00000428017 TSPAN1O60635 241 aa16.66■□□□□ 0.26
VARS2-203ENST00000428017 BAIAP3O94812 1187 aa16.66■□□□□ 0.26
VARS2-203ENST00000428017 NMT1P30419 496 aaKnown RBP16.66■□□□□ 0.26
VARS2-203ENST00000428017 AXLP30530 894 aa16.66■□□□□ 0.26
VARS2-203ENST00000428017 KCNJ6P48051 423 aa16.66■□□□□ 0.26
VARS2-203ENST00000428017 EPHB4P54760 987 aa16.66■□□□□ 0.26
VARS2-203ENST00000428017 TMEM240Q5SV17 173 aa16.66■□□□□ 0.26
VARS2-203ENST00000428017 TWF2Q6IBS0 349 aaKnown RBP16.66■□□□□ 0.26
VARS2-203ENST00000428017 PPP4R3CPQ6ZMV5 832 aa16.66■□□□□ 0.26
VARS2-203ENST00000428017 C16orf59Q7L2K0 433 aa16.66■□□□□ 0.26
VARS2-203ENST00000428017 BICD1Q96G01 975 aa16.66■□□□□ 0.26
VARS2-203ENST00000428017 GDF15Q99988 308 aa16.66■□□□□ 0.26
VARS2-203ENST00000428017 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.66■□□□□ 0.262e-8■■■■□ 24.4
VARS2-203ENST00000428017 MRPL4Q9BYD3 311 aaKnown RBP16.66■□□□□ 0.26
VARS2-203ENST00000428017 CCDC113Q9H0I3 377 aa16.66■□□□□ 0.26
VARS2-203ENST00000428017 AGPAT5Q9NUQ2 364 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms