RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 KIFAP3Q92845 792 aa10.16□□□□□ -0.78
SMC1A-203ENST00000428014 MRPL38Q96DV4 380 aaKnown RBP10.16□□□□□ -0.78
SMC1A-203ENST00000428014 ADAM2Q99965 735 aa10.16□□□□□ -0.78
SMC1A-203ENST00000428014 C2orf40Q9H1Z8 148 aa10.16□□□□□ -0.78
SMC1A-203ENST00000428014 CDHR5Q9HBB8 845 aa10.16□□□□□ -0.78
SMC1A-203ENST00000428014 PCDHB7Q9Y5E2 793 aa10.16□□□□□ -0.78
SMC1A-203ENST00000428014 PCDHB6Q9Y5E3 794 aa10.16□□□□□ -0.78
SMC1A-203ENST00000428014 MTCH2Q9Y6C9 303 aa10.16□□□□□ -0.78
SMC1A-203ENST00000428014 BRWD1Q9NSI6 2320 aa10.15□□□□□ -0.78
SMC1A-203ENST00000428014 A0A087WZ62 844 aa10.15□□□□□ -0.78
SMC1A-203ENST00000428014 C2orf72A6NCS6 295 aa10.15□□□□□ -0.78
SMC1A-203ENST00000428014 EYA4O95677 639 aa10.15□□□□□ -0.78
SMC1A-203ENST00000428014 PPM1AP35813 382 aa10.15□□□□□ -0.78
SMC1A-203ENST00000428014 LONP1P36776 959 aaKnown RBP10.15□□□□□ -0.78
SMC1A-203ENST00000428014 NAMPTP43490 491 aa10.15□□□□□ -0.78
SMC1A-203ENST00000428014 EFNA5P52803 228 aa10.15□□□□□ -0.78
SMC1A-203ENST00000428014 NPEPPSP55786 919 aa10.15□□□□□ -0.78
SMC1A-203ENST00000428014 CYP4A11Q02928 519 aa10.15□□□□□ -0.78
SMC1A-203ENST00000428014 TMEM62Q0P6H9 643 aa10.15□□□□□ -0.78
SMC1A-203ENST00000428014 BTG3Q14201 252 aaPredicted RBP10.15□□□□□ -0.78
SMC1A-203ENST00000428014 ADGRE1Q14246 886 aa10.15□□□□□ -0.78
SMC1A-203ENST00000428014 CTTNQ14247 550 aaKnown RBP10.15□□□□□ -0.78
SMC1A-203ENST00000428014 AAK1Q2M2I8 961 aa10.15□□□□□ -0.78
SMC1A-203ENST00000428014 EPC2Q52LR7 807 aa10.15□□□□□ -0.78
SMC1A-203ENST00000428014 ECHDC2Q86YB7 292 aa10.15□□□□□ -0.78
SMC1A-203ENST00000428014 RHPN2Q8IUC4 686 aa10.15□□□□□ -0.78
SMC1A-203ENST00000428014 PGBD4Q96DM1 585 aa10.15□□□□□ -0.78
SMC1A-203ENST00000428014 CCDC43Q96MW1 224 aaKnown RBP10.15□□□□□ -0.78
SMC1A-203ENST00000428014 FDXACB1Q9BRP7 624 aaPredicted RBP10.15□□□□□ -0.78
SMC1A-203ENST00000428014 NTPCRQ9BSD7 190 aaKnown RBP10.15□□□□□ -0.78
SMC1A-203ENST00000428014 PRDM12Q9H4Q4 367 aa10.15□□□□□ -0.78
SMC1A-203ENST00000428014 PRMT7Q9NVM4 692 aaPredicted RBP10.15□□□□□ -0.78
SMC1A-203ENST00000428014 KANSL3Q9P2N6 904 aa10.15□□□□□ -0.78
SMC1A-203ENST00000428014 DNM3Q9UQ16 869 aa10.15□□□□□ -0.78
SMC1A-203ENST00000428014 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.15□□□□□ -0.78
SMC1A-203ENST00000428014 FNDC1Q4ZHG4 1894 aaPredicted RBP10.15□□□□□ -0.79
SMC1A-203ENST00000428014 LCHNA4D1U4 455 aa10.14□□□□□ -0.79
SMC1A-203ENST00000428014 MGEA5O60502 916 aa10.14□□□□□ -0.79
SMC1A-203ENST00000428014 MED24O75448 989 aa10.14□□□□□ -0.79
SMC1A-203ENST00000428014 C1RP00736 705 aa10.14□□□□□ -0.79
SMC1A-203ENST00000428014 MYOGP15173 224 aa10.14□□□□□ -0.79
SMC1A-203ENST00000428014 LAG3P18627 525 aa10.14□□□□□ -0.79
SMC1A-203ENST00000428014 SYT1P21579 422 aa10.14□□□□□ -0.79
SMC1A-203ENST00000428014 GUCY2CP25092 1073 aa10.14□□□□□ -0.79
SMC1A-203ENST00000428014 PLCB3Q01970 1234 aa10.14□□□□□ -0.79
SMC1A-203ENST00000428014 GRB10Q13322 594 aa10.14□□□□□ -0.79
SMC1A-203ENST00000428014 DRP2Q13474 957 aa10.14□□□□□ -0.79
SMC1A-203ENST00000428014 PLA2G4FQ68DD2 849 aa10.14□□□□□ -0.79
SMC1A-203ENST00000428014 NOTUMQ6P988 496 aa10.14□□□□□ -0.79
SMC1A-203ENST00000428014 GPR65Q8IYL9 337 aa10.14□□□□□ -0.79
SMC1A-203ENST00000428014 LRRC43Q8N309 656 aa10.14□□□□□ -0.79
SMC1A-203ENST00000428014 SYMPKQ92797 1274 aaKnown RBP10.14□□□□□ -0.79
SMC1A-203ENST00000428014 PPP2R3CQ969Q6 453 aa10.14□□□□□ -0.79
SMC1A-203ENST00000428014 ZBTB10Q96DT7 871 aa10.14□□□□□ -0.79
SMC1A-203ENST00000428014 DDX27Q96GQ7 796 aaKnown RBP10.14□□□□□ -0.79
SMC1A-203ENST00000428014 SCLT1Q96NL6 688 aa10.14□□□□□ -0.79
SMC1A-203ENST00000428014 CCSER1Q9C0I3 900 aa10.14□□□□□ -0.79
SMC1A-203ENST00000428014 FZD8Q9H461 694 aa10.14□□□□□ -0.79
SMC1A-203ENST00000428014 LRFN2Q9ULH4 789 aa10.14□□□□□ -0.79
SMC1A-203ENST00000428014 RBM19Q9Y4C8 960 aaKnown RBP10.14□□□□□ -0.79
SMC1A-203ENST00000428014 NLRC5Q86WI3 1866 aa10.14□□□□□ -0.79
SMC1A-203ENST00000428014 A0A1B0GUA9 196 aa10.13□□□□□ -0.79
SMC1A-203ENST00000428014 H0YCG3 227 aa10.13□□□□□ -0.79
SMC1A-203ENST00000428014 ARHGEF15O94989 841 aa10.13□□□□□ -0.79
SMC1A-203ENST00000428014 NCLP19338 710 aaKnown RBP10.13□□□□□ -0.79
SMC1A-203ENST00000428014 HOXA11P31270 313 aaPredicted RBP10.13□□□□□ -0.79
SMC1A-203ENST00000428014 CCT6AP40227 531 aaKnown RBP10.13□□□□□ -0.79
SMC1A-203ENST00000428014 MCTP1Q6DN14 999 aa10.13□□□□□ -0.79
SMC1A-203ENST00000428014 PADI6Q6TGC4 694 aa10.13□□□□□ -0.79
SMC1A-203ENST00000428014 CATSPER4Q7RTX7 472 aa10.13□□□□□ -0.79
SMC1A-203ENST00000428014 APBB1IPQ7Z5R6 666 aaPredicted RBP10.13□□□□□ -0.79
SMC1A-203ENST00000428014 HACE1Q8IYU2 909 aa10.13□□□□□ -0.79
SMC1A-203ENST00000428014 RNF149Q8NC42 400 aa10.13□□□□□ -0.79
SMC1A-203ENST00000428014 SLC17A8Q8NDX2 589 aa10.13□□□□□ -0.79
SMC1A-203ENST00000428014 SNX29Q8TEQ0 813 aa10.13□□□□□ -0.79
SMC1A-203ENST00000428014 SPIRE2Q8WWL2 714 aa10.13□□□□□ -0.79
SMC1A-203ENST00000428014 ARNTL2Q8WYA1 636 aa10.13□□□□□ -0.79
SMC1A-203ENST00000428014 DRC1Q96MC2 740 aa10.13□□□□□ -0.79
SMC1A-203ENST00000428014 UIMC1Q96RL1 719 aa10.13□□□□□ -0.79
SMC1A-203ENST00000428014 CDCA3Q99618 268 aaPredicted RBP10.13□□□□□ -0.79
SMC1A-203ENST00000428014 FAM105AQ9NUU6 356 aa10.13□□□□□ -0.79
SMC1A-203ENST00000428014 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.13□□□□□ -0.79
SMC1A-203ENST00000428014 GINS2Q9Y248 185 aa10.13□□□□□ -0.79
SMC1A-203ENST00000428014 PCDHB12Q9Y5F1 795 aa10.13□□□□□ -0.79
SMC1A-203ENST00000428014 ARHGEF35A5YM69 484 aa10.12□□□□□ -0.79
SMC1A-203ENST00000428014 TMEM150BA6NC51 233 aa10.12□□□□□ -0.79
SMC1A-203ENST00000428014 STX6O43752 255 aa10.12□□□□□ -0.79
SMC1A-203ENST00000428014 ERLIN2O94905 339 aa10.12□□□□□ -0.79
SMC1A-203ENST00000428014 ATF7P17544 494 aaPredicted RBP10.12□□□□□ -0.79
SMC1A-203ENST00000428014 ATP2B1P20020 1258 aa10.12□□□□□ -0.79
SMC1A-203ENST00000428014 GLRA2P23416 452 aa10.12□□□□□ -0.79
SMC1A-203ENST00000428014 NASPP49321 788 aaPredicted RBP10.12□□□□□ -0.79
SMC1A-203ENST00000428014 MBTD1Q05BQ5 628 aa10.12□□□□□ -0.79
SMC1A-203ENST00000428014 CAPSQ13938 189 aa10.12□□□□□ -0.79
SMC1A-203ENST00000428014 DSG2Q14126 1118 aa10.12□□□□□ -0.79
SMC1A-203ENST00000428014 GIT2Q14161 759 aa10.12□□□□□ -0.79
SMC1A-203ENST00000428014 AMHR2Q16671 573 aa10.12□□□□□ -0.79
SMC1A-203ENST00000428014 PUS10Q3MIT2 529 aaKnown RBP10.12□□□□□ -0.79
SMC1A-203ENST00000428014 TMEM119Q4V9L6 283 aa10.12□□□□□ -0.79
SMC1A-203ENST00000428014 POTEGQ6S5H5 508 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms