RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 RPS6KA4O75676 772 aa6.1□□□□□ -1.43
HERC4-206ENST00000427635 MOCS2O96007 188 aaPredicted RBP6.1□□□□□ -1.43
HERC4-206ENST00000427635 MRPS35P82673 323 aaKnown RBP6.1□□□□□ -1.43
HERC4-206ENST00000427635 PDCLQ13371 301 aa6.1□□□□□ -1.43
HERC4-206ENST00000427635 TKFCQ3LXA3 575 aa6.1□□□□□ -1.43
HERC4-206ENST00000427635 KRT39Q6A163 491 aa6.1□□□□□ -1.43
HERC4-206ENST00000427635 ITPRIPL1Q6GPH6 555 aa6.1□□□□□ -1.43
HERC4-206ENST00000427635 ZMAT2Q96NC0 199 aaKnown RBP6.1□□□□□ -1.43
HERC4-206ENST00000427635 HTATIP2Q9BUP3 242 aa6.1□□□□□ -1.43
HERC4-206ENST00000427635 UBE2TQ9NPD8 197 aaPredicted RBP6.1□□□□□ -1.43
HERC4-206ENST00000427635 KDM5CP41229 1560 aa6.1□□□□□ -1.43
HERC4-206ENST00000427635 OPHN1O60890 802 aa6.1□□□□□ -1.43
HERC4-206ENST00000427635 GUCA1CO95843 209 aa6.1□□□□□ -1.43
HERC4-206ENST00000427635 GH2P01242 217 aa6.1□□□□□ -1.43
HERC4-206ENST00000427635 ITGA4P13612 1032 aa6.1□□□□□ -1.43
HERC4-206ENST00000427635 ATP5JP18859 108 aa6.1□□□□□ -1.43
HERC4-206ENST00000427635 NME3Q13232 169 aa6.1□□□□□ -1.43
HERC4-206ENST00000427635 KLHL40Q2TBA0 621 aa6.1□□□□□ -1.43
HERC4-206ENST00000427635 KRT71Q3SY84 523 aa6.1□□□□□ -1.43
HERC4-206ENST00000427635 EFHC2Q5JST6 749 aa6.1□□□□□ -1.43
HERC4-206ENST00000427635 GLB1LQ6UWU2 654 aa6.1□□□□□ -1.43
HERC4-206ENST00000427635 GLT1D1Q96MS3 346 aa6.1□□□□□ -1.43
HERC4-206ENST00000427635 KLC2Q9H0B6 622 aa6.1□□□□□ -1.43
HERC4-206ENST00000427635 GREM2Q9H772 168 aa6.1□□□□□ -1.43
HERC4-206ENST00000427635 RNF146Q9NTX7 359 aa6.1□□□□□ -1.43
HERC4-206ENST00000427635 THEGQ9P2T0 379 aa6.1□□□□□ -1.43
HERC4-206ENST00000427635 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.1□□□□□ -1.43
HERC4-206ENST00000427635 ARAP3Q8WWN8 1544 aa6.1□□□□□ -1.43
HERC4-206ENST00000427635 ERVV-1B6SEH8 477 aa6.1□□□□□ -1.43
HERC4-206ENST00000427635 TOM1L1O75674 476 aa6.1□□□□□ -1.43
HERC4-206ENST00000427635 H2AFZP0C0S5 128 aa6.1□□□□□ -1.43
HERC4-206ENST00000427635 SFNP31947 248 aa6.1□□□□□ -1.43
HERC4-206ENST00000427635 NPY2RP49146 381 aa6.1□□□□□ -1.43
HERC4-206ENST00000427635 PLD1Q13393 1074 aa6.1□□□□□ -1.43
HERC4-206ENST00000427635 SLC45A4Q5BKX6 768 aa6.1□□□□□ -1.43
HERC4-206ENST00000427635 H2AFVQ71UI9 128 aa6.1□□□□□ -1.43
HERC4-206ENST00000427635 IL17RAQ96F46 866 aa6.1□□□□□ -1.43
HERC4-206ENST00000427635 HES6Q96HZ4 224 aa6.1□□□□□ -1.43
HERC4-206ENST00000427635 MAGEB10Q96LZ2 347 aaPredicted RBP6.1□□□□□ -1.43
HERC4-206ENST00000427635 EXO5Q9H790 373 aa6.1□□□□□ -1.43
HERC4-206ENST00000427635 TBC1D22BQ9NU19 505 aa6.1□□□□□ -1.43
HERC4-206ENST00000427635 SLC38A7Q9NVC3 462 aa6.1□□□□□ -1.43
HERC4-206ENST00000427635 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.1□□□□□ -1.43
HERC4-206ENST00000427635 SRP68Q9UHB9 627 aaKnown RBP6.1□□□□□ -1.43
HERC4-206ENST00000427635 PTPN22Q9Y2R2 807 aa6.1□□□□□ -1.43
HERC4-206ENST00000427635 L3MBTL1Q9Y468 752 aa6.1□□□□□ -1.43
HERC4-206ENST00000427635 PCDHA5Q9Y5H7 936 aa6.1□□□□□ -1.43
HERC4-206ENST00000427635 A0A1W2PP64 1363 aa6.1□□□□□ -1.43
HERC4-206ENST00000427635 KIAA0232Q92628 1395 aa6.1□□□□□ -1.43
HERC4-206ENST00000427635 C5orf58C9J3I9 102 aa6.1□□□□□ -1.43
HERC4-206ENST00000427635 DFFAO00273 331 aa6.1□□□□□ -1.43
HERC4-206ENST00000427635 H2AFYO75367 372 aaKnown RBP6.1□□□□□ -1.43
HERC4-206ENST00000427635 KRT7P08729 469 aa6.1□□□□□ -1.43
HERC4-206ENST00000427635 BRAFP15056 766 aa6.1□□□□□ -1.43
HERC4-206ENST00000427635 GPSM2P81274 684 aa6.1□□□□□ -1.43
HERC4-206ENST00000427635 CDK17Q00537 523 aa6.1□□□□□ -1.43
HERC4-206ENST00000427635 TP53BP2Q13625 1128 aa6.1□□□□□ -1.43
HERC4-206ENST00000427635 MUM1Q2TAK8 710 aa6.1□□□□□ -1.43
HERC4-206ENST00000427635 CEP68Q76N32 757 aa6.1□□□□□ -1.43
HERC4-206ENST00000427635 DDX42Q86XP3 938 aaKnown RBP eCLIP6.1□□□□□ -1.43
HERC4-206ENST00000427635 MICALL2Q8IY33 904 aa6.1□□□□□ -1.43
HERC4-206ENST00000427635 LARP4BQ92615 738 aaKnown RBP6.1□□□□□ -1.43
HERC4-206ENST00000427635 OTULINQ96BN8 352 aa6.1□□□□□ -1.43
HERC4-206ENST00000427635 FAF2Q96CS3 445 aa6.1□□□□□ -1.43
HERC4-206ENST00000427635 GJD4Q96KN9 370 aaPredicted RBP6.1□□□□□ -1.43
HERC4-206ENST00000427635 TRIM55Q9BYV6 548 aa6.1□□□□□ -1.43
HERC4-206ENST00000427635 XAB2Q9HCS7 855 aaKnown RBP6.1□□□□□ -1.43
HERC4-206ENST00000427635 TSR3Q9UJK0 312 aaKnown RBP6.1□□□□□ -1.43
HERC4-206ENST00000427635 PRKAB1Q9Y478 270 aa6.1□□□□□ -1.43
HERC4-206ENST00000427635 PLEKHG2Q9H7P9 1386 aa6.1□□□□□ -1.43
HERC4-206ENST00000427635 UBA6A0AVT1 1052 aaPredicted RBP6.09□□□□□ -1.43
HERC4-206ENST00000427635 TTLL13PA6NNM8 815 aa6.09□□□□□ -1.43
HERC4-206ENST00000427635 CIAO1O76071 339 aa6.09□□□□□ -1.43
HERC4-206ENST00000427635 HIST1H2AGP0C0S8 130 aaPredicted RBP6.09□□□□□ -1.43
HERC4-206ENST00000427635 RBP3P10745 1247 aa6.09□□□□□ -1.43
HERC4-206ENST00000427635 HIST1H2ADP20671 130 aa6.09□□□□□ -1.43
HERC4-206ENST00000427635 OR1G1P47890 313 aa6.09□□□□□ -1.43
HERC4-206ENST00000427635 HPCAP84074 193 aa6.09□□□□□ -1.43
HERC4-206ENST00000427635 CACNB2Q08289 660 aaPredicted RBP6.09□□□□□ -1.43
HERC4-206ENST00000427635 ASAP3Q8TDY4 903 aa6.09□□□□□ -1.43
HERC4-206ENST00000427635 NRBF2Q96F24 287 aa6.09□□□□□ -1.43
HERC4-206ENST00000427635 KIF12Q96FN5 646 aa6.09□□□□□ -1.43
HERC4-206ENST00000427635 HIST1H2AHQ96KK5 128 aa6.09□□□□□ -1.43
HERC4-206ENST00000427635 HIST1H2AJQ99878 128 aa6.09□□□□□ -1.43
HERC4-206ENST00000427635 H2AFJQ9BTM1 129 aa6.09□□□□□ -1.43
HERC4-206ENST00000427635 RPAP3Q9H6T3 665 aaPredicted RBP6.09□□□□□ -1.43
HERC4-206ENST00000427635 DCTPP1Q9H773 170 aa6.09□□□□□ -1.43
HERC4-206ENST00000427635 OVOS2A0A0G2JMS6 1433 aa6.09□□□□□ -1.43
HERC4-206ENST00000427635 OVOS2A0A0J9YW53 1432 aa6.09□□□□□ -1.43
HERC4-206ENST00000427635 OVOS2Q6IE36 1432 aa6.09□□□□□ -1.43
HERC4-206ENST00000427635 H0Y3Z8 333 aa6.09□□□□□ -1.43
HERC4-206ENST00000427635 TPPPO94811 219 aa6.09□□□□□ -1.43
HERC4-206ENST00000427635 CTSHP09668 335 aa6.09□□□□□ -1.43
HERC4-206ENST00000427635 ADORA2BP29275 332 aa6.09□□□□□ -1.43
HERC4-206ENST00000427635 CTNNA1P35221 906 aaKnown RBP6.09□□□□□ -1.43
HERC4-206ENST00000427635 PPP3CCP48454 512 aa6.09□□□□□ -1.43
HERC4-206ENST00000427635 SNAP25P60880 206 aa6.09□□□□□ -1.43
HERC4-206ENST00000427635 KRT76Q01546 638 aa6.09□□□□□ -1.43
HERC4-206ENST00000427635 MGAT5BQ3V5L5 792 aa6.09□□□□□ -1.43
HERC4-206ENST00000427635 TRMT44Q8IYL2 757 aaKnown RBP6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms