RNA–Protein interactions for RNA: ENST00000427563.1

COL9A2-204, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-204ENST00000427563 DACT1Q9NYF0 836 aa21.33■■□□□ 1.01
COL9A2-204ENST00000427563 DBR1Q9UK59 544 aaKnown RBP21.33■■□□□ 1.01
COL9A2-204ENST00000427563 PP2D1A8MPX8 630 aa21.32■■□□□ 1
COL9A2-204ENST00000427563 ASAP2O43150 1006 aa21.32■■□□□ 1
COL9A2-204ENST00000427563 PBX3P40426 434 aa21.32■■□□□ 1
COL9A2-204ENST00000427563 HYAL1Q12794 435 aa21.32■■□□□ 1
COL9A2-204ENST00000427563 AMHR2Q16671 573 aa21.32■■□□□ 1
COL9A2-204ENST00000427563 LONRF3Q496Y0 759 aa21.32■■□□□ 1
COL9A2-204ENST00000427563 MCTP1Q6DN14 999 aa21.32■■□□□ 1
COL9A2-204ENST00000427563 TWF2Q6IBS0 349 aaKnown RBP21.32■■□□□ 1
COL9A2-204ENST00000427563 ADGRD2Q7Z7M1 963 aa21.32■■□□□ 1
COL9A2-204ENST00000427563 ADAMTS19Q8TE59 1207 aa21.32■■□□□ 1
COL9A2-204ENST00000427563 POLR3FQ9H1D9 316 aaPredicted RBP21.32■■□□□ 1
COL9A2-204ENST00000427563 SMC3Q9UQE7 1217 aa21.32■■□□□ 1
COL9A2-204ENST00000427563 SPOUT1Q5T280 376 aaKnown RBP21.31■■□□□ 1
COL9A2-204ENST00000427563 BSNDQ8WZ55 320 aa21.31■■□□□ 1
COL9A2-204ENST00000427563 SYMPKQ92797 1274 aaKnown RBP21.31■■□□□ 1
COL9A2-204ENST00000427563 NACC1Q96RE7 527 aa21.31■■□□□ 1
COL9A2-204ENST00000427563 MMTAG2Q9BU76 263 aaKnown RBP21.31■■□□□ 1
COL9A2-204ENST00000427563 KIF3AQ9Y496 699 aa21.31■■□□□ 1
COL9A2-204ENST00000427563 HOXA2O43364 376 aa21.3■■□□□ 1
COL9A2-204ENST00000427563 TSPAN1O60635 241 aa21.3■■□□□ 1
COL9A2-204ENST00000427563 ZNF623O75123 536 aa21.3■■□□□ 1
COL9A2-204ENST00000427563 FGF18O76093 207 aa21.3■■□□□ 1
COL9A2-204ENST00000427563 CDC25AP30304 524 aa21.3■■□□□ 1
COL9A2-204ENST00000427563 LTBRP36941 435 aa21.3■■□□□ 1
COL9A2-204ENST00000427563 MBTD1Q05BQ5 628 aa21.3■■□□□ 1
COL9A2-204ENST00000427563 MXD4Q14582 209 aaPredicted RBP21.3■■□□□ 1
COL9A2-204ENST00000427563 MAEAQ7L5Y9 396 aa21.3■■□□□ 1
COL9A2-204ENST00000427563 LRWD1Q9UFC0 647 aa21.3■■□□□ 1
COL9A2-204ENST00000427563 B4GALT3O60512 393 aa21.29■■□□□ 1
COL9A2-204ENST00000427563 LAG3P18627 525 aa21.29■■□□□ 1
COL9A2-204ENST00000427563 KCNA5P22460 613 aa21.29■■□□□ 1
COL9A2-204ENST00000427563 CCT6AP40227 531 aaKnown RBP21.29■■□□□ 1
COL9A2-204ENST00000427563 AFF1P51825 1210 aaKnown RBP21.29■■□□□ 1
COL9A2-204ENST00000427563 POU5F1BQ06416 359 aa21.29■■□□□ 1
COL9A2-204ENST00000427563 PDIA5Q14554 519 aa21.29■■□□□ 1
COL9A2-204ENST00000427563 CTC1Q2NKJ3 1217 aa21.29■■□□□ 1
COL9A2-204ENST00000427563 AGMOQ6ZNB7 445 aa21.29■■□□□ 1
COL9A2-204ENST00000427563 LRRC43Q8N309 656 aa21.29■■□□□ 1
COL9A2-204ENST00000427563 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.29■■□□□ 1
COL9A2-204ENST00000427563 ERMNQ8TAM6 284 aa21.29■■□□□ 1
COL9A2-204ENST00000427563 PABPC5Q96DU9 382 aaKnown RBP21.29■■□□□ 1
COL9A2-204ENST00000427563 CPB2Q96IY4 423 aa21.29■■□□□ 1
COL9A2-204ENST00000427563 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.29■■□□□ 1
COL9A2-204ENST00000427563 PCDHB2Q9Y5E7 798 aa21.29■■□□□ 1
COL9A2-204ENST00000427563 PCDHB12Q9Y5F1 795 aa21.29■■□□□ 1
COL9A2-204ENST00000427563 LINC01565O15544 149 aa21.28■■□□□ 1
COL9A2-204ENST00000427563 OFD1O75665 1012 aa21.28■■□□□ 1
COL9A2-204ENST00000427563 MUTP22033 750 aa21.28■■□□□ 1
COL9A2-204ENST00000427563 PRPHP41219 470 aa21.28■■□□□ 1
COL9A2-204ENST00000427563 ERVFC1P60507 584 aa21.28■■□□□ 1
COL9A2-204ENST00000427563 ATP2C1P98194 919 aaPredicted RBP21.28■■□□□ 1
COL9A2-204ENST00000427563 DLX2Q07687 328 aaPredicted RBP21.28■■□□□ 1
COL9A2-204ENST00000427563 AAK1Q2M2I8 961 aa21.28■■□□□ 1
COL9A2-204ENST00000427563 LEXMQ3ZCV2 418 aa21.28■■□□□ 1
COL9A2-204ENST00000427563 RILPL1Q5EBL4 403 aa21.28■■□□□ 1
COL9A2-204ENST00000427563 LARP1BQ659C4 914 aaKnown RBP21.28■■□□□ 1
COL9A2-204ENST00000427563 PADI6Q6TGC4 694 aa21.28■■□□□ 1
COL9A2-204ENST00000427563 KCNT2Q6UVM3 1135 aa21.28■■□□□ 1
COL9A2-204ENST00000427563 KCNK18Q7Z418 384 aa21.28■■□□□ 1
COL9A2-204ENST00000427563 MRPL10Q7Z7H8 261 aaKnown RBP21.28■■□□□ 1
COL9A2-204ENST00000427563 SMG8Q8ND04 991 aaKnown RBP21.28■■□□□ 1
COL9A2-204ENST00000427563 CCDC43Q96MW1 224 aaKnown RBP21.28■■□□□ 1
COL9A2-204ENST00000427563 EIF2AQ9BY44 585 aaKnown RBP21.28■■□□□ 1
COL9A2-204ENST00000427563 NFKBIZQ9BYH8 718 aa21.28■■□□□ 1
COL9A2-204ENST00000427563 POLD4Q9HCU8 107 aa21.28■■□□□ 1
COL9A2-204ENST00000427563 NCOR1O75376 2440 aa21.27■■□□□ 1
COL9A2-204ENST00000427563 H3BQ06 376 aaPredicted RBP21.27■■□□□ 1
COL9A2-204ENST00000427563 H3BQV1 296 aa21.27■■□□□ 1
COL9A2-204ENST00000427563 FSCN2O14926 492 aa21.27■■□□□ 1
COL9A2-204ENST00000427563 B4GALT5O43286 388 aa21.27■■□□□ 1
COL9A2-204ENST00000427563 CYP11B2P19099 503 aa21.27■■□□□ 1
COL9A2-204ENST00000427563 HAUS3Q68CZ6 603 aa21.27■■□□□ 1
COL9A2-204ENST00000427563 THNSL1Q8IYQ7 743 aa21.27■■□□□ 1
COL9A2-204ENST00000427563 ABI1Q8IZP0 508 aa21.27■■□□□ 1
COL9A2-204ENST00000427563 SNX29Q8TEQ0 813 aa21.27■■□□□ 1
COL9A2-204ENST00000427563 UHRF1Q96T88 793 aaPredicted RBP21.27■■□□□ 1
COL9A2-204ENST00000427563 AAASQ9NRG9 546 aa21.27■■□□□ 1
COL9A2-204ENST00000427563 DDX19AQ9NUU7 478 aaKnown RBP21.27■■□□□ 1
COL9A2-204ENST00000427563 KIAA1024Q9UPX6 916 aa21.27■■□□□ 1
COL9A2-204ENST00000427563 ARHGEF35A5YM69 484 aa21.26■□□□□ 0.99
COL9A2-204ENST00000427563 TTLL13PA6NNM8 815 aa21.26■□□□□ 0.99
COL9A2-204ENST00000427563 INO80B-WBP1J3KQ70 363 aa21.26■□□□□ 0.99
COL9A2-204ENST00000427563 LAD1O00515 517 aa21.26■□□□□ 0.99
COL9A2-204ENST00000427563 EDN1P05305 212 aa21.26■□□□□ 0.99
COL9A2-204ENST00000427563 ARF4P18085 180 aaPredicted RBP21.26■□□□□ 0.99
COL9A2-204ENST00000427563 RAB27AP51159 221 aa21.26■□□□□ 0.99
COL9A2-204ENST00000427563 PLCB3Q01970 1234 aa21.26■□□□□ 0.99
COL9A2-204ENST00000427563 TFDP1Q14186 410 aa21.26■□□□□ 0.99
COL9A2-204ENST00000427563 CDCA2Q69YH5 1023 aaPredicted RBP21.26■□□□□ 0.99
COL9A2-204ENST00000427563 TMEM173Q86WV6 379 aaPredicted RBP21.26■□□□□ 0.99
COL9A2-204ENST00000427563 SLC39A11Q8N1S5 342 aa21.26■□□□□ 0.99
COL9A2-204ENST00000427563 MCPH1Q8NEM0 835 aa21.26■□□□□ 0.99
COL9A2-204ENST00000427563 ZNF558Q96NG5 402 aa21.26■□□□□ 0.99
COL9A2-204ENST00000427563 BHMT2Q9H2M3 363 aa21.26■□□□□ 0.99
COL9A2-204ENST00000427563 RNF39Q9H2S5 420 aa21.26■□□□□ 0.99
COL9A2-204ENST00000427563 NRDE2Q9H7Z3 1164 aa21.26■□□□□ 0.99
COL9A2-204ENST00000427563 TBC1D13Q9NVG8 400 aa21.26■□□□□ 0.99
COL9A2-204ENST00000427563 CLDND1Q9NY35 253 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms